RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 A0A087WWL8 130 aa11.34□□□□□ -0.59
PRDM4-201ENST00000228437 TEX22C9J3V5 150 aa11.34□□□□□ -0.59
PRDM4-201ENST00000228437 PPDPFLQ8WWR9 84 aa11.34□□□□□ -0.59
PRDM4-201ENST00000228437 IGKV3D-20A0A0C4DH25 116 aa11.33□□□□□ -0.59
PRDM4-201ENST00000228437 ORMDL2Q53FV1 153 aa11.33□□□□□ -0.59
PRDM4-201ENST00000228437 SEM1Q6ZVN7 128 aa11.33□□□□□ -0.59
PRDM4-201ENST00000228437 ZNF56Q15929 161 aa11.33□□□□□ -0.6
PRDM4-201ENST00000228437 C1QTNF4Q9BXJ3 329 aa11.33□□□□□ -0.6
PRDM4-201ENST00000228437 ASIPP42127 132 aa11.33□□□□□ -0.6
PRDM4-201ENST00000228437 PIP4P2Q8N4L2 257 aa11.33□□□□□ -0.6
PRDM4-201ENST00000228437 SMIM20Q8N5G0 67 aa11.33□□□□□ -0.6
PRDM4-201ENST00000228437 ADARB2-AS1A8MUL3 147 aa11.33□□□□□ -0.6
PRDM4-201ENST00000228437 SCGB1A1P11684 91 aa11.33□□□□□ -0.6
PRDM4-201ENST00000228437 FAM215AQ9Y5M1 114 aa11.33□□□□□ -0.6
PRDM4-201ENST00000228437 C5orf64Q2M2E5 130 aa11.32□□□□□ -0.6
PRDM4-201ENST00000228437 HIGD1BQ9P298 99 aa11.32□□□□□ -0.6
PRDM4-201ENST00000228437 MBD3L4A6NDZ8 208 aaPredicted RBP11.32□□□□□ -0.6
PRDM4-201ENST00000228437 MBD3L3A6NE82 208 aaPredicted RBP11.32□□□□□ -0.6
PRDM4-201ENST00000228437 MBD3L5A6NJ08 208 aaPredicted RBP11.32□□□□□ -0.6
PRDM4-201ENST00000228437 PDE6HQ13956 83 aa11.32□□□□□ -0.6
PRDM4-201ENST00000228437 MBD3L2Q8NHZ7 208 aaPredicted RBP11.32□□□□□ -0.6
PRDM4-201ENST00000228437 AGPAT4-IT1Q9H0P7 198 aa11.32□□□□□ -0.6
PRDM4-201ENST00000228437 FSTL3O95633 263 aa11.32□□□□□ -0.6
PRDM4-201ENST00000228437 SUMO2P61956 95 aaKnown RBP11.32□□□□□ -0.6
PRDM4-201ENST00000228437 ZNF493Q6ZR52 646 aa11.32□□□□□ -0.6
PRDM4-201ENST00000228437 ERG28Q9UKR5 140 aa11.31□□□□□ -0.6
PRDM4-201ENST00000228437 WI2-2373I1.2A0A1W2PRP0 233 aa11.31□□□□□ -0.6
PRDM4-201ENST00000228437 TMEM95Q3KNT9 176 aa11.31□□□□□ -0.6
PRDM4-201ENST00000228437 NTN5Q8WTR8 489 aaPredicted RBP11.31□□□□□ -0.6
PRDM4-201ENST00000228437 SMIM2Q9BVW6 85 aa11.31□□□□□ -0.6
PRDM4-201ENST00000228437 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.3□□□□□ -0.6
PRDM4-201ENST00000228437 Q6ZQT7 251 aa11.3□□□□□ -0.6
PRDM4-201ENST00000228437 OR11H6Q8NGC7 330 aa11.3□□□□□ -0.6
PRDM4-201ENST00000228437 ACACBO00763 2458 aa11.3□□□□□ -0.6
PRDM4-201ENST00000228437 TCF15Q12870 199 aa11.3□□□□□ -0.6
PRDM4-201ENST00000228437 PLEKHB2Q96CS7 222 aa11.3□□□□□ -0.6
PRDM4-201ENST00000228437 HHLA3Q9XRX5 114 aa11.3□□□□□ -0.6
PRDM4-201ENST00000228437 TP53TG1Q9Y2A0 90 aa11.3□□□□□ -0.6
PRDM4-201ENST00000228437 BOD1L1Q8NFC6 3051 aa11.3□□□□□ -0.6
PRDM4-201ENST00000228437 G3V318 75 aa11.3□□□□□ -0.6
PRDM4-201ENST00000228437 Q6ZUT4 128 aa11.29□□□□□ -0.6
PRDM4-201ENST00000228437 TM2D2Q9BX73 214 aa11.29□□□□□ -0.6
PRDM4-201ENST00000228437 TMEM262E9PQX1 116 aa11.29□□□□□ -0.6
PRDM4-201ENST00000228437 SPRY4Q9C004 299 aa11.29□□□□□ -0.6
PRDM4-201ENST00000228437 TRAV8-4A0A0B4J246 113 aa11.29□□□□□ -0.6
PRDM4-201ENST00000228437 SLC25A20O43772 301 aa11.29□□□□□ -0.6
PRDM4-201ENST00000228437 ZNF688P0C7X2 276 aa11.29□□□□□ -0.6
PRDM4-201ENST00000228437 XGP55808 180 aa11.29□□□□□ -0.6
PRDM4-201ENST00000228437 MYO18BQ8IUG5 2567 aa11.28□□□□□ -0.6
PRDM4-201ENST00000228437 A0A0G2JNJ9 132 aa11.28□□□□□ -0.6
PRDM4-201ENST00000228437 CDX4O14627 284 aaPredicted RBP11.28□□□□□ -0.6
PRDM4-201ENST00000228437 LGALS1P09382 135 aaKnown RBP11.28□□□□□ -0.6
PRDM4-201ENST00000228437 LY6EQ16553 131 aa11.28□□□□□ -0.6
PRDM4-201ENST00000228437 LINC00311Q8N616 119 aa11.28□□□□□ -0.6
PRDM4-201ENST00000228437 ANKRD29Q8N6D5 301 aa11.28□□□□□ -0.6
PRDM4-201ENST00000228437 Q9UFV3 132 aa11.28□□□□□ -0.6
PRDM4-201ENST00000228437 PTPN13Q12923 2485 aa11.28□□□□□ -0.6
PRDM4-201ENST00000228437 E7EQL1 145 aa11.28□□□□□ -0.6
PRDM4-201ENST00000228437 TSPAN13O95857 204 aa11.28□□□□□ -0.6
PRDM4-201ENST00000228437 GATA3P23771 443 aa11.28□□□□□ -0.6
PRDM4-201ENST00000228437 TRPT1Q86TN4 253 aaKnown RBP11.28□□□□□ -0.6
PRDM4-201ENST00000228437 TMEM219Q86XT9 240 aa11.28□□□□□ -0.6
PRDM4-201ENST00000228437 F6UB75 175 aa11.28□□□□□ -0.6
PRDM4-201ENST00000228437 FAM159AQ6UWV7 190 aa11.28□□□□□ -0.6
PRDM4-201ENST00000228437 RNF185Q96GF1 192 aa11.28□□□□□ -0.6
PRDM4-201ENST00000228437 DUSP14O95147 198 aaKnown RBP11.27□□□□□ -0.6
PRDM4-201ENST00000228437 CD7P09564 240 aa11.27□□□□□ -0.61
PRDM4-201ENST00000228437 PF4V1P10720 104 aa11.27□□□□□ -0.61
PRDM4-201ENST00000228437 LINC00477Q96M19 166 aa11.27□□□□□ -0.61
PRDM4-201ENST00000228437 DCHS1Q96JQ0 3298 aa11.27□□□□□ -0.61
PRDM4-201ENST00000228437 MGAQ8IWI9 3026 aa11.27□□□□□ -0.61
PRDM4-201ENST00000228437 COX6CP09669 75 aa11.27□□□□□ -0.61
PRDM4-201ENST00000228437 GAGE5Q13069 117 aa11.27□□□□□ -0.61
PRDM4-201ENST00000228437 GAGE6Q13070 117 aa11.27□□□□□ -0.61
PRDM4-201ENST00000228437 TAL2Q16559 108 aa11.27□□□□□ -0.61
PRDM4-201ENST00000228437 IGHV3-73A0A0B4J1V6 119 aa11.26□□□□□ -0.61
PRDM4-201ENST00000228437 INS-IGF2F8WCM5 200 aa11.26□□□□□ -0.61
PRDM4-201ENST00000228437 CEACAM4O75871 244 aa11.26□□□□□ -0.61
PRDM4-201ENST00000228437 SLC50A1Q9BRV3 221 aa11.26□□□□□ -0.61
PRDM4-201ENST00000228437 GNRH2O43555 120 aa11.26□□□□□ -0.61
PRDM4-201ENST00000228437 TCL1BO95988 128 aa11.26□□□□□ -0.61
PRDM4-201ENST00000228437 RPL39P62891 51 aaKnown RBP11.26□□□□□ -0.61
PRDM4-201ENST00000228437 ZNF672Q499Z4 452 aaPredicted RBP11.26□□□□□ -0.61
PRDM4-201ENST00000228437 SPXQ9BT56 116 aa11.26□□□□□ -0.61
PRDM4-201ENST00000228437 DPH3P1Q9H4G8 78 aa11.26□□□□□ -0.61
PRDM4-201ENST00000228437 TEN1Q86WV5 123 aa11.25□□□□□ -0.61
PRDM4-201ENST00000228437 FAM57AQ8TBR7 257 aa11.25□□□□□ -0.61
PRDM4-201ENST00000228437 PTPRQQ9UMZ3 2332 aa11.25□□□□□ -0.61
PRDM4-201ENST00000228437 C2orf82Q6UX34 121 aa11.25□□□□□ -0.61
PRDM4-201ENST00000228437 PRO1854Q9UHT4 67 aa11.25□□□□□ -0.61
PRDM4-201ENST00000228437 B9A039 149 aa11.24□□□□□ -0.61
PRDM4-201ENST00000228437 ANKRD11Q6UB99 2663 aaPredicted RBP11.24□□□□□ -0.61
PRDM4-201ENST00000228437 DGAT2L7PQ6IED9 249 aa11.24□□□□□ -0.61
PRDM4-201ENST00000228437 IGF1P05019 195 aa11.24□□□□□ -0.61
PRDM4-201ENST00000228437 RNASE13Q5GAN3 156 aaKnown RBP11.24□□□□□ -0.61
PRDM4-201ENST00000228437 EEF1AKMT3Q96AZ1 226 aa11.24□□□□□ -0.61
PRDM4-201ENST00000228437 SPATA25Q9BR10 227 aa11.24□□□□□ -0.61
PRDM4-201ENST00000228437 TRAV21A0A0B4J279 112 aa11.24□□□□□ -0.61
PRDM4-201ENST00000228437 IGLC6P0CF74 106 aa11.24□□□□□ -0.61
PRDM4-201ENST00000228437 CFAP47Q6ZTR5 3102 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms