RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Efemp2Q9WVJ9 443 aa13.18□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Mob3bQ8VE04 216 aa13.17□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Dnase2bQ9QY48 354 aa13.17□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 TgfaP48030 159 aa13.17□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Tmem170bP86050 132 aa13.17□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Gm11232Q5SPI8 295 aa13.17□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Mrpl51Q9CPY1 128 aa13.17□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Dnal4Q9DCM4 105 aa13.17□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Gm6525A0A0A6YW33 106 aa13.17□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Igkv4-50A0A0B4J1J0 117 aa13.17□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Mrps36Q9CQX8 102 aa13.17□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Dppa2Q9CWH0 301 aa13.17□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Cbln1Q9R171 193 aa13.17□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 TbpP29037 316 aa13.17□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Gm5150Q1AN92 299 aa13.17□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Zdbf2Q5SS00 2493 aaKnown RBP13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 D830044I16RikA0A1D5RM53 117 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Fam3dP97805 223 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Shisa3Q3UPR0 238 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Trav3-3Q5R1C3 114 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 GfralQ6SJE0 393 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Smim19Q80ZU4 107 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Irf2bp2E9Q1P8 570 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Sc5dO88822 299 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 P01657 111 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Dtx1Q61010 627 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Spred3Q6P6N5 408 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Slc25a28Q8R0Z5 364 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Fgf16Q9ESL8 207 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 St6galnac3Q9WUV2 305 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Ighv5-4A0A075B5P9 117 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Gm42517A0A1Y7VLQ2 374 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Ccl11P48298 97 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Cops9Q3U898 57 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Vkorc1l1Q6TEK5 176 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Col4a3Q9QZS0 1669 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Ttc6G3UYY4 1857 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Frrs1lB1AXV0 293 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Gm21882J3QN86 361 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Cr2P19070 1025 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Defa3P28310 93 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Defa10P50708 93 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Defa15P50713 93 aa13.16□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Prr19B2RW88 366 aa13.15□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Bet1lO35153 111 aa13.15□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Acrv1P50289 261 aa13.15□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Shisa6Q3UH99 525 aa13.15□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Gm45844A0A1B0GRQ2 137 aa13.15□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Olfr466E9Q2B9 308 aa13.15□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Rspo4Q8BJ73 228 aa13.15□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Lrrc25Q8K1T1 297 aa13.15□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Fmc1Q9CR13 113 aa13.15□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Taf1Q80UV9 1891 aa13.15□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 GgactQ923B0 149 aa13.15□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 1700013G24RikQ9DAC6 286 aa13.15□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Tspoap1Q7TNF8 1846 aa13.15□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Trav6n-5A0A075B621 112 aa13.15□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Trav6-5A0A075B6B5 112 aa13.15□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Olfr175-ps1A0A140T8K4 308 aa13.15□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 P04212 136 aa13.15□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Tmem189Q99LQ7 271 aa13.15□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Ndufb8Q9D6J5 186 aa13.15□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Klk1b22P15948 259 aa13.15□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Gm5868Q8BJG1 145 aa13.15□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Olfr1336Q8VGH5 314 aa13.15□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 C2cd4aE9Q861 334 aa13.14□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Zglp1Q1WG82 266 aa13.14□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Gm5148Q8BGG2 154 aa13.14□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Olfr399Q7TRX3 311 aa13.14□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Mixl1Q9WUI0 231 aa13.14□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Scn5aQ9JJV9 2019 aa13.14□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Cd5P13379 494 aa13.14□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Crispld2Q8BZQ2 495 aa13.14□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Olfr223Q8VF69 319 aa13.14□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Gm21789J3QMZ1 123 aa13.14□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Gm21870J3QPN2 123 aa13.14□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Gm21883J3QPV3 123 aa13.14□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Mpv17P19258 176 aa13.14□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Trdv2-2Q5R1A4 116 aa13.14□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Tbr1Q64336 681 aa13.14□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Olfr965Q7TRA7 312 aa13.14□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Chrdl2Q8VEA6 426 aa13.14□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Gfra1P97785 468 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 B020031M17RikQ3UT11 173 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Olfr148Q60887 310 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Wrap73Q9JM98 462 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Trbv12-1A0A0B4J1H0 124 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 CrxO54751 299 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Eda2rQ8BX35 297 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Rnf182Q8C432 247 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Cypt1Q8CH20 168 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 PgpQ8CHP8 321 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Slc16a4Q8R0M8 500 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Osr1Q9WVG7 266 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Npc2Q9Z0J0 149 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Rabac1Q9Z0S9 185 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Gm6812B1AXU1 112 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 1700020N15RikL7MTX3 112 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Ren2P00796 401 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Psmg4P0C7N9 123 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 52.1 ms