RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Msmo1Q9CRA4 293 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 ShpkQ9D5J6 476 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Mettl26Q9DCS2 204 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Hoga1Q9DCU9 321 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Cd164Q9R0L9 197 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Lhx9Q9WUH2 397 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Wisp2Q9Z0G4 251 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 PtprdQ64487 1912 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 R3hdmlA2A5I3 253 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Nat8b-psE0CYC6 232 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Olfr250E9PV37 331 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Mrps12O35680 139 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Igll1P20764 209 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Galr1P56479 348 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Cacng7P62956 275 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Bex6Q3TZW7 114 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Svs6Q64356 99 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Glt8d1Q6NSU3 371 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Slc35d2Q762D5 326 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Olfr875Q7TRE5 310 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 IqcjQ8BPW0 110 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Arl6ip5Q8R5J9 188 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Olfr50Q8VGK5 312 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Glipr2Q9CYL5 154 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Olfr938Q9EQ93 315 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Klk1b27Q9JM71 263 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Xcr1Q9R0M1 322 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Plxnb1Q8CJH3 2119 aa7.23□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Ralgapa1Q6GYP7 2035 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Gm21818J3KMS6 170 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 P01759 136 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Hbb-bh1P04444 147 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Gabra3P26049 492 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Neurog1P70660 244 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Gm5113Q3UGK8 141 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Olfr150Q60895 312 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Rasl11aQ6IMB1 242 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Kctd12Q6WVG3 327 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Tas2r129Q7M709 320 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Slc25a21Q8BZ09 298 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Cd207Q8VBX4 331 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Olfr206Q8VGP9 306 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 AY761184Q9D848 116 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Lyrm7Q9DA03 104 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 SmpxQ9DC77 85 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Plekha3Q9ERS4 297 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Wdr90Q6ZPG2 1874 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Tcrg-C1A0A075B5Z0 172 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Trav14d-1A0A075B6B1 121 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Trav21-dv12A0A075B6C4 109 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Ighv1-42A0A0A6YY38 117 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Gm21244J3QK38 227 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Gm20834J3QM72 227 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 AF067061O70616 171 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Zfp27P10077 819 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Gpm6aP35802 278 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Mpc1P63030 109 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Klhdc2Q4G5Y1 406 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Ppp3r2Q63811 179 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Olfr32Q7TQZ0 308 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 A530064D06RikQ8BNV8 229 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Defb22Q8BVC1 179 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Arfrp1Q8BXL7 201 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Ndufa6Q9CQZ5 131 aaKnown RBP7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 9430069I07RikQ9CX21 111 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Abhd5Q9DBL9 351 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 VcanQ62059 3357 aa7.22□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Scn8aQ9WTU3 1978 aa7.21□□□□□ -1.25
Upf3b-201ENSMUST00000076265 Ighv2-2A0A075B5P8 116 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Vmn1r82A0A087WRV1 305 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Olfr102B2RT33 308 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 A630073D07RikE9PWS6 100 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Irf2bp2E9Q1P8 570 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Lbhd2G3UW55 114 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Gm20815J3KMI0 227 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Gm20914J3QME2 227 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Gm21812J3QN84 227 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Gm21882J3QN86 361 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Crisp2P16563 243 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 BcheQ03311 603 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Rnf166Q3U9F6 237 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Tmem241Q3UME2 297 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Vdac1Q60932 296 aaKnown RBP7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Ssxb10Q6XAR7 170 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Slc35e4Q8K3D6 351 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Vmn1r38Q8R2E1 302 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Olfr61Q8VGM2 311 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Sec11cQ9D8V7 192 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Arpc1aQ9R0Q6 370 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 RlfA2A7F4 1918 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Gtf3c1Q8K284 2101 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Ighv10-3A0A075B5T6 119 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Tcf21O35437 179 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Evi2aP20934 223 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Znf728Q6P5C7 752 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Olfr1012Q8VFJ7 311 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Rps21Q9CQR2 83 aaKnown RBP7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Psmg3Q9CZH3 122 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 Slc25a39Q9D8K8 359 aa7.21□□□□□ -1.26
Upf3b-201ENSMUST00000076265 1700025F22RikQ9D9Y7 111 aa7.21□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 417.2 ms