RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Prss50Q8BLH5 439 aa12.47□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Olfr530Q8VFE8 307 aa12.47□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Ormdl3Q9CPZ6 153 aa12.47□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Psmg3Q9CZH3 122 aa12.47□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Sumo3Q9Z172 110 aa12.47□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Igkv10-95A0A0G2JFY3 115 aa12.46□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Cisd3B1AR13 137 aa12.46□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Snx22Q8C084 192 aa12.46□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Plppr2Q8VCY8 343 aa12.46□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Olfr1256Q8VGP1 306 aa12.46□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Ccl17F6R5P4 103 aa12.46□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 NrtnP97463 195 aa12.46□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 CxadrP97792 365 aa12.46□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Zfp119bQ8K0G9 543 aa12.46□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Olfr195Q8VGQ6 308 aa12.46□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 V1ra8Q9EQ48 279 aa12.46□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Igkv15-103A0A140T8P3 115 aa12.46□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Gm13030A2APQ6 143 aa12.46□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Nkx2-8O70584 235 aa12.46□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Wnt5bP22726 359 aa12.46□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Reg2Q08731 173 aa12.46□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Mex3bQ69Z36 601 aaKnown RBP12.46□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Slamf6Q9ET39 351 aa12.46□□□□□ -0.41
Pcdha1-201ENSMUST00000070797 Gm9881Q8BR56 211 aa12.46□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 St6galnac6Q9JM95 333 aa12.46□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Foxh1O88621 401 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 PpyP10601 100 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 G430049J08RikQ3TL09 166 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Shisa6Q3UH99 525 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 D130052B06RikQ3UW13 202 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Slc25a47Q6IS41 310 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Fmc1Q9CR13 113 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Cldn23Q9D7D7 296 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Gm10203F6QJ09 66 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Efna4O08542 206 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Grem1O70326 184 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Bcl6bO88282 474 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Otx1P80205 355 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Gpr132Q9Z282 382 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Gm21913J3KML9 361 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Gm21776J3QPJ5 361 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Zfp977L7N2E7 438 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Rpl8P62918 257 aaKnown RBP12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Supt4h1aP63271 117 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Nxph1Q61200 271 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Smim19Q80ZU4 107 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 H2-M10.4Q85ZW8 331 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Tarm1B6A8R8 288 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Mpig6bD7PDD4 242 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 RpeQ8VEE0 228 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Olfr1337A2ACY8 315 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Olfr779E9PUS9 130 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Foxa2P35583 459 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 St6galnac3Q9WUV2 305 aa12.45□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 P06334 169 aa12.44□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 V1rd19Q3KNP5 305 aa12.44□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Cops9Q3U898 57 aa12.44□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Ifitm10Q8BR26 201 aa12.44□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 ChtopQ9CY57 249 aaKnown RBP12.44□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Alox12bO70582 701 aa12.44□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Timp3P39876 211 aa12.44□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Tmem170bP86050 132 aa12.44□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 MymxQ2Q5T5 84 aa12.44□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Gm614Q3V2K1 191 aa12.44□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Jpt2Q6PGH2 190 aaKnown RBP12.44□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 GgnQ80WJ1 673 aa12.44□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Syngr3Q8R191 229 aa12.44□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Tmem178aQ9CZ16 297 aa12.44□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Rnase4Q9JJH1 148 aa12.44□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Ighv1-15A0A0A6YXA5 117 aa12.44□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Tm4sf19E9Q9H8 206 aa12.44□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 RaxO35602 342 aa12.44□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 CiartQ3TQ03 375 aa12.44□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Slc25a20Q9Z2Z6 301 aaKnown RBP12.44□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Icam2P35330 277 aa12.44□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Olfr1209Q3SXJ3 310 aa12.44□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Olfr1419Q7TQS2 343 aa12.44□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Olfr1382Q7TQT3 311 aa12.44□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Cox6cQ9CPQ1 76 aa12.44□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Ndufa7Q9Z1P6 113 aaKnown RBP12.44□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Cd200r1lQ6XJV6 249 aa12.43□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Gm20825J3QM67 227 aa12.43□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 P18529 117 aa12.43□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Ssty2Q149W4 227 aa12.43□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Gm13199Q8C8E0 125 aa12.43□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Ercc8Q8CFD5 397 aa12.43□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Prr15Q9D1T5 122 aa12.43□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Fam206aQ80ZQ9 193 aaKnown RBP12.43□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Nit2Q9JHW2 276 aa12.43□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Ighv5-17A0A075B5R1 117 aa12.43□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Trav6n-7A0A075B6A6 116 aa12.43□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Onecut1O08755 465 aa12.43□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 P01746 140 aa12.43□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Defb20Q30KP3 96 aa12.43□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 BC049762Q8C601 163 aa12.43□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Klf17Q8CFA7 341 aa12.43□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Vmn1r197Q8R265 298 aa12.43□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Vmn1r63Q9EPT1 300 aa12.43□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Cend1Q9JKC6 149 aa12.43□□□□□ -0.42
Pcdha1-201ENSMUST00000070797 Ccl4P14097 92 aa12.42□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 35.7 ms