RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Gm5771Q792Y9 245 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Med6Q921D4 246 aaKnown RBP7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 MmdQ9CQY7 238 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Ndufb3Q9CQZ6 104 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 AmtnQ9D3J8 213 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 CutcQ9D8X1 272 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Unc79Q0KK59 2596 aa7.02□□□□□ -1.29
Trim39-201ENSMUST00000042717 Rif1Q6PR54 2419 aaKnown RBP7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr39E9PVX1 319 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Zfp493E9Q1L8 384 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Cldn34c3J3QJW5 233 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Cldn34c2J3QNM1 233 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 AdoQ6PDY2 256 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Slc35e1Q8CD26 409 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Cldn34c1Q8K193 234 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Vmn1r222Q8R269 308 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Pomt1Q8R2R1 746 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr1368Q8VFG3 314 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr473Q8VG44 310 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Sdf2l1Q9ESP1 221 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Pxmp4Q9JJW0 212 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Opn3Q9WUK7 400 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Trav6-1A0A075B5Z8 112 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Trav6d-3A0A075B6B3 112 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Ighv1-18A0A0A6YXN4 117 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Trav12d-1A0N8R0 115 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Tmem200bD3Z0P8 284 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 1700067P10RikG3X8U2 183 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 G6pcP35576 357 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Rpl8P62918 257 aaKnown RBP7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Gm4792Q569Q2 183 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Trav6-3Q5R1E6 112 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Zfp273Q7M6W8 501 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Sox21Q811W0 276 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Dirc2Q8BFQ6 478 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Cacfd1Q8BG21 171 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr112Q8C0S2 320 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Gm26566Q8CAC1 153 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Vmn1r211Q8R266 298 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr476Q8VGI4 310 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Gar1Q9CY66 231 aaKnown RBP7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Mrpl30Q9D7N6 160 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Chst4Q9R1I1 388 aa7.01□□□□□ -1.29
Trim39-201ENSMUST00000042717 Ighv14-2A0A075B5R7 117 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Zfp972A2AW65 139 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr747E9PXH6 313 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 E430018J23RikE9PZQ8 461 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr893K7N678 312 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Tcstv1O70619 171 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Serf1O88892 62 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Sssca1P56873 199 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Eif5aP63242 154 aaKnown RBP7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Cd52Q64389 74 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Prima1Q810F0 153 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Elovl5Q8BHI7 299 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Vmn1r226Q8R2A8 298 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr816Q8VFU2 312 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr513Q8VFZ3 309 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr916Q8VG53 310 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Tceal8Q9CZY2 117 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Dmrtc1c1Q9D410 238 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 AcanQ61282 2132 aaKnown RBP7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Gm11565A2A4M7 156 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr177E9Q7W1 309 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 P04219 140 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Hoxa1P09022 331 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Prkar2aP12367 401 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 PmchP56942 165 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Vdac2Q60930 295 aaKnown RBP7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr399Q7TRX3 311 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Ttc9cQ810A3 171 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Q8BN57 294 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Exosc2Q8VBV3 293 aaKnown RBP7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr1370Q8VFG4 316 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr1297Q8VGE8 312 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Rnf125Q9D9R0 233 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Tspan4Q9DCK3 238 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Mixl1Q9WUI0 231 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 LenepQ9WVB6 61 aa7□□□□□ -1.29
Trim39-201ENSMUST00000042717 Trav23A0A0G2JG17 115 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Vmn1r128L7N2B4 307 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Cnih1O35372 144 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 B2mP01887 119 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Cela2aP05208 271 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Cxcl2P10889 100 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 ApcsP12246 224 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Patz1Q5NBY9 687 aaKnown RBP6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Higd1cQ76I25 96 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr491Q8VG06 310 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 FibinQ9CQS3 217 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Slc50a1Q9CXK4 221 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Tmem50aQ9CXL1 157 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 ArtnQ9Z0L2 224 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Cd3eP22646 189 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 FshbQ60687 130 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Il22ra2Q80XF5 230 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Mzt1Q8BUR9 78 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Ercc8Q8CFD5 397 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Ndufs8Q8K3J1 212 aa6.99□□□□□ -1.29
Trim39-201ENSMUST00000042717 Olfr960Q8VET5 316 aa6.99□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 436.8 ms