RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 HMGB3O15347 200 aaKnown RBP5.71□□□□□ -1.5
SCARB2-209ENST00000638409 ZNF207O43670 478 aaKnown RBP5.71□□□□□ -1.5
SCARB2-209ENST00000638409 S1PR2O95136 353 aa5.71□□□□□ -1.5
SCARB2-209ENST00000638409 AMBPP02760 352 aa5.71□□□□□ -1.5
SCARB2-209ENST00000638409 PPBPP02775 128 aa5.71□□□□□ -1.5
SCARB2-209ENST00000638409 FHL2Q14192 279 aa5.71□□□□□ -1.5
SCARB2-209ENST00000638409 ADIRFQ15847 76 aa5.71□□□□□ -1.5
SCARB2-209ENST00000638409 TMEM97Q5BJF2 176 aa5.71□□□□□ -1.5
SCARB2-209ENST00000638409 ZNF833PQ6ZTB9 187 aa5.71□□□□□ -1.5
SCARB2-209ENST00000638409 IFI27L2Q9H2X8 130 aa5.71□□□□□ -1.5
SCARB2-209ENST00000638409 SDF2L1Q9HCN8 221 aa5.71□□□□□ -1.5
SCARB2-209ENST00000638409 ZFP30Q9Y2G7 519 aa5.71□□□□□ -1.5
SCARB2-209ENST00000638409 CCL25O15444 150 aa5.71□□□□□ -1.5
SCARB2-209ENST00000638409 PGLYRP1O75594 196 aaPredicted RBP5.71□□□□□ -1.5
SCARB2-209ENST00000638409 IGHV3-7P01780 117 aa5.71□□□□□ -1.5
SCARB2-209ENST00000638409 EBI3Q14213 229 aa5.71□□□□□ -1.5
SCARB2-209ENST00000638409 KIAA0087Q14695 138 aa5.71□□□□□ -1.5
SCARB2-209ENST00000638409 RBMY1FQ15415 496 aaKnown RBP5.71□□□□□ -1.5
SCARB2-209ENST00000638409 ZNF705AQ6ZN79 300 aaPredicted RBP5.71□□□□□ -1.5
SCARB2-209ENST00000638409 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.71□□□□□ -1.5
SCARB2-209ENST00000638409 FXYD5Q96DB9 178 aa5.71□□□□□ -1.5
SCARB2-209ENST00000638409 ABHD14BQ96IU4 210 aa5.71□□□□□ -1.5
SCARB2-209ENST00000638409 HILPDAQ9Y5L2 63 aa5.71□□□□□ -1.5
SCARB2-209ENST00000638409 TRAV9-2A0A087WT02 112 aa5.7□□□□□ -1.5
SCARB2-209ENST00000638409 B4DEV8 164 aa5.7□□□□□ -1.5
SCARB2-209ENST00000638409 MORN5Q5VZ52 161 aa5.7□□□□□ -1.5
SCARB2-209ENST00000638409 DPPA3Q6W0C5 159 aa5.7□□□□□ -1.5
SCARB2-209ENST00000638409 OR10G4Q8NGN3 311 aa5.7□□□□□ -1.5
SCARB2-209ENST00000638409 SCGB1C1Q8TD33 95 aa5.7□□□□□ -1.5
SCARB2-209ENST00000638409 DHRS4-AS1Q9P1J3 65 aa5.7□□□□□ -1.5
SCARB2-209ENST00000638409 CACNG5Q9UF02 275 aa5.7□□□□□ -1.5
SCARB2-209ENST00000638409 TRAV1-1A0A0B4J248 108 aa5.7□□□□□ -1.5
SCARB2-209ENST00000638409 IGHV1-3A0A0C4DH29 117 aa5.7□□□□□ -1.5
SCARB2-209ENST00000638409 C20orf202A1L168 122 aa5.7□□□□□ -1.5
SCARB2-209ENST00000638409 MAP1LC3B2A6NCE7 125 aa5.7□□□□□ -1.5
SCARB2-209ENST00000638409 A6NDX4 124 aa5.7□□□□□ -1.5
SCARB2-209ENST00000638409 DIAPH2-AS1Q14236 149 aa5.7□□□□□ -1.5
SCARB2-209ENST00000638409 MSMO1Q15800 293 aa5.7□□□□□ -1.5
SCARB2-209ENST00000638409 TMEM183AQ8IXX5 376 aa5.7□□□□□ -1.5
SCARB2-209ENST00000638409 LYG1Q8N1E2 194 aa5.7□□□□□ -1.5
SCARB2-209ENST00000638409 C1QTNF4Q9BXJ3 329 aa5.7□□□□□ -1.5
SCARB2-209ENST00000638409 MAP1LC3BQ9GZQ8 125 aa5.7□□□□□ -1.5
SCARB2-209ENST00000638409 IGHV3-16A0A0C4DH30 117 aa5.69□□□□□ -1.5
SCARB2-209ENST00000638409 A0A0J9YXV3 536 aa5.69□□□□□ -1.5
SCARB2-209ENST00000638409 UBE2L5PA0A1B0GUS4 154 aa5.69□□□□□ -1.5
SCARB2-209ENST00000638409 H3BUX3 64 aa5.69□□□□□ -1.5
SCARB2-209ENST00000638409 IFNA1P01562 189 aa5.69□□□□□ -1.5
SCARB2-209ENST00000638409 IGKV1-39P01597 117 aa5.69□□□□□ -1.5
SCARB2-209ENST00000638409 IGKV1D-39P04432 117 aa5.69□□□□□ -1.5
SCARB2-209ENST00000638409 SAA2P0DJI9 122 aaPredicted RBP5.69□□□□□ -1.5
SCARB2-209ENST00000638409 BATFQ16520 125 aa5.69□□□□□ -1.5
SCARB2-209ENST00000638409 C1orf194Q5T5A4 169 aa5.69□□□□□ -1.5
SCARB2-209ENST00000638409 SMIM7Q9BQ49 75 aa5.69□□□□□ -1.5
SCARB2-209ENST00000638409 PSENENQ9NZ42 101 aa5.69□□□□□ -1.5
SCARB2-209ENST00000638409 TRBV24-1A0A075B6N3 115 aa5.69□□□□□ -1.5
SCARB2-209ENST00000638409 DUXBA0A1W2PPF3 345 aa5.69□□□□□ -1.5
SCARB2-209ENST00000638409 OR4C46A6NHA9 309 aa5.69□□□□□ -1.5
SCARB2-209ENST00000638409 NDUFS5O43920 106 aa5.69□□□□□ -1.5
SCARB2-209ENST00000638409 IGKV1D-33P01593 117 aa5.69□□□□□ -1.5
SCARB2-209ENST00000638409 IGKV1-33P01594 117 aa5.69□□□□□ -1.5
SCARB2-209ENST00000638409 ZNF138P52744 262 aa5.69□□□□□ -1.5
SCARB2-209ENST00000638409 ADAMTSL4-AS1Q5T5F5 129 aa5.69□□□□□ -1.5
SCARB2-209ENST00000638409 C9orf66Q5T8R8 295 aa5.69□□□□□ -1.5
SCARB2-209ENST00000638409 VPS25Q9BRG1 176 aa5.69□□□□□ -1.5
SCARB2-209ENST00000638409 F11RQ9Y624 299 aaKnown RBP5.69□□□□□ -1.5
SCARB2-209ENST00000638409 OR11H12B2RN74 326 aa5.68□□□□□ -1.5
SCARB2-209ENST00000638409 IGKV1-5P01602 117 aa5.68□□□□□ -1.5
SCARB2-209ENST00000638409 PMVKQ15126 192 aa5.68□□□□□ -1.5
SCARB2-209ENST00000638409 DRAM1Q8N682 238 aa5.68□□□□□ -1.5
SCARB2-209ENST00000638409 OR11H1Q8NG94 326 aa5.68□□□□□ -1.5
SCARB2-209ENST00000638409 OR11H2Q8NH07 326 aa5.68□□□□□ -1.5
SCARB2-209ENST00000638409 MBD3L1Q8WWY6 194 aa5.68□□□□□ -1.5
SCARB2-209ENST00000638409 TMEM158Q8WZ71 300 aa5.68□□□□□ -1.5
SCARB2-209ENST00000638409 NABP2Q9BQ15 211 aa5.68□□□□□ -1.5
SCARB2-209ENST00000638409 SLC25A22Q9H936 323 aa5.68□□□□□ -1.5
SCARB2-209ENST00000638409 SYNGR2O43760 224 aa5.68□□□□□ -1.5
SCARB2-209ENST00000638409 KRTAP24-1Q3LI83 254 aa5.68□□□□□ -1.5
SCARB2-209ENST00000638409 SPANXN5Q5MJ07 72 aa5.68□□□□□ -1.5
SCARB2-209ENST00000638409 Q8N6K4 173 aa5.68□□□□□ -1.5
SCARB2-209ENST00000638409 ZNF645Q8N7E2 425 aa5.68□□□□□ -1.5
SCARB2-209ENST00000638409 OR4C12Q96R67 309 aa5.68□□□□□ -1.5
SCARB2-209ENST00000638409 TMEM242Q9NWH2 141 aa5.68□□□□□ -1.5
SCARB2-209ENST00000638409 NAT8Q9UHE5 227 aa5.68□□□□□ -1.5
SCARB2-209ENST00000638409 PFN1P07737 140 aaKnown RBP5.67□□□□□ -1.5
SCARB2-209ENST00000638409 DEFA4P12838 97 aa5.67□□□□□ -1.5
SCARB2-209ENST00000638409 RPL23P62829 140 aaKnown RBP5.67□□□□□ -1.5
SCARB2-209ENST00000638409 EIF4EBP1Q13541 118 aaPredicted RBP5.67□□□□□ -1.5
SCARB2-209ENST00000638409 TEX43Q6ZNM6 134 aa5.67□□□□□ -1.5
SCARB2-209ENST00000638409 C16orf95Q9H693 158 aa5.67□□□□□ -1.5
SCARB2-209ENST00000638409 RBM12B-AS1Q9P1G2 102 aa5.67□□□□□ -1.5
SCARB2-209ENST00000638409 FUT9Q9Y231 359 aa5.67□□□□□ -1.5
SCARB2-209ENST00000638409 FBN1P35555 2871 aaKnown RBP5.67□□□□□ -1.5
SCARB2-209ENST00000638409 IGLV4-3A0A075B6K6 122 aa5.67□□□□□ -1.5
SCARB2-209ENST00000638409 H7BYZ3 331 aa5.67□□□□□ -1.5
SCARB2-209ENST00000638409 SLC38A11Q08AI6 406 aa5.67□□□□□ -1.5
SCARB2-209ENST00000638409 IQCJQ1A5X6 159 aa5.67□□□□□ -1.5
SCARB2-209ENST00000638409 TMEM241Q24JQ0 296 aa5.67□□□□□ -1.5
SCARB2-209ENST00000638409 RPL39P5Q59GN2 51 aa5.67□□□□□ -1.5
SCARB2-209ENST00000638409 COL5A1-AS1Q5SY13 56 aa5.67□□□□□ -1.5
SCARB2-209ENST00000638409 NEGR1Q7Z3B1 354 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms