RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 FER1L6-AS1Q8NA97 138 aa4.75□□□□□ -1.65
CACNA1D-227ENST00000637844 GTSF1Q8WW33 167 aa4.75□□□□□ -1.65
CACNA1D-227ENST00000637844 DLX4Q92988 240 aaPredicted RBP4.75□□□□□ -1.65
CACNA1D-227ENST00000637844 RAX2Q96IS3 184 aa4.75□□□□□ -1.65
CACNA1D-227ENST00000637844 CITED2Q99967 270 aaPredicted RBP4.75□□□□□ -1.65
CACNA1D-227ENST00000637844 POLQO75417 2590 aa4.75□□□□□ -1.65
CACNA1D-227ENST00000637844 ABCA1O95477 2261 aa4.74□□□□□ -1.65
CACNA1D-227ENST00000637844 A0A1B0GXF2 115 aa4.74□□□□□ -1.65
CACNA1D-227ENST00000637844 CRLF1O75462 422 aa4.74□□□□□ -1.65
CACNA1D-227ENST00000637844 CSN3P07498 182 aa4.74□□□□□ -1.65
CACNA1D-227ENST00000637844 ZNF705DP0CH99 300 aaPredicted RBP4.74□□□□□ -1.65
CACNA1D-227ENST00000637844 ZNF705BP0CI00 300 aaPredicted RBP4.74□□□□□ -1.65
CACNA1D-227ENST00000637844 ZNF80P51504 273 aaPredicted RBP4.74□□□□□ -1.65
CACNA1D-227ENST00000637844 CMC4P56277 68 aaPredicted RBP4.74□□□□□ -1.65
CACNA1D-227ENST00000637844 PROK1P58294 105 aa4.74□□□□□ -1.65
CACNA1D-227ENST00000637844 FHL3Q13643 280 aa4.74□□□□□ -1.65
CACNA1D-227ENST00000637844 OR10J3Q5JRS4 329 aa4.74□□□□□ -1.65
CACNA1D-227ENST00000637844 COA6Q5JTJ3 125 aaKnown RBP4.74□□□□□ -1.65
CACNA1D-227ENST00000637844 LYZL1Q6UWQ5 148 aa4.74□□□□□ -1.65
CACNA1D-227ENST00000637844 FOXI2Q6ZQN5 318 aa4.74□□□□□ -1.65
CACNA1D-227ENST00000637844 TMEM18Q96B42 140 aa4.74□□□□□ -1.65
CACNA1D-227ENST00000637844 DUX3Q96PT4 197 aa4.74□□□□□ -1.65
CACNA1D-227ENST00000637844 ODF3Q96PU9 254 aa4.74□□□□□ -1.65
CACNA1D-227ENST00000637844 SPAG8Q99932 426 aaPredicted RBP4.74□□□□□ -1.65
CACNA1D-227ENST00000637844 SIGLEC8Q9NYZ4 499 aa4.74□□□□□ -1.65
CACNA1D-227ENST00000637844 SELENOKQ9Y6D0 94 aa4.74□□□□□ -1.65
CACNA1D-227ENST00000637844 CENPEQ02224 2701 aa4.74□□□□□ -1.65
CACNA1D-227ENST00000637844 PTPN13Q12923 2485 aa4.74□□□□□ -1.65
CACNA1D-227ENST00000637844 ABCA12Q86UK0 2595 aa4.74□□□□□ -1.65
CACNA1D-227ENST00000637844 ITPR3Q14573 2671 aa4.74□□□□□ -1.65
CACNA1D-227ENST00000637844 A0A0J9YX75 114 aa4.73□□□□□ -1.65
CACNA1D-227ENST00000637844 CYSRT1A8MQ03 144 aa4.73□□□□□ -1.65
CACNA1D-227ENST00000637844 F6UB75 175 aa4.73□□□□□ -1.65
CACNA1D-227ENST00000637844 J3KRW8 73 aa4.73□□□□□ -1.65
CACNA1D-227ENST00000637844 ARMS2P0C7Q2 107 aa4.73□□□□□ -1.65
CACNA1D-227ENST00000637844 S100A4P26447 101 aaKnown RBP4.73□□□□□ -1.65
CACNA1D-227ENST00000637844 SRIP30626 198 aa4.73□□□□□ -1.65
CACNA1D-227ENST00000637844 RNASE4P34096 147 aaKnown RBP4.73□□□□□ -1.65
CACNA1D-227ENST00000637844 CTRLP40313 264 aa4.73□□□□□ -1.65
CACNA1D-227ENST00000637844 CACNG7P62955 275 aa4.73□□□□□ -1.65
CACNA1D-227ENST00000637844 Q0VG73 95 aa4.73□□□□□ -1.65
CACNA1D-227ENST00000637844 TWIST1Q15672 202 aa4.73□□□□□ -1.65
CACNA1D-227ENST00000637844 NSUN5P1Q3KNT7 163 aa4.73□□□□□ -1.65
CACNA1D-227ENST00000637844 PDZD11Q5EBL8 140 aa4.73□□□□□ -1.65
CACNA1D-227ENST00000637844 FAM159AQ6UWV7 190 aa4.73□□□□□ -1.65
CACNA1D-227ENST00000637844 NDUFA11Q86Y39 141 aa4.73□□□□□ -1.65
CACNA1D-227ENST00000637844 APRG1Q8IVJ8 170 aa4.73□□□□□ -1.65
CACNA1D-227ENST00000637844 HIST3H2BBQ8N257 126 aa4.73□□□□□ -1.65
CACNA1D-227ENST00000637844 GATD1Q8NB37 220 aa4.73□□□□□ -1.65
CACNA1D-227ENST00000637844 KCNS1Q96KK3 526 aa4.73□□□□□ -1.65
CACNA1D-227ENST00000637844 FAM19A4Q96LR4 140 aa4.73□□□□□ -1.65
CACNA1D-227ENST00000637844 NAGKQ9UJ70 344 aa4.73□□□□□ -1.65
CACNA1D-227ENST00000637844 UNC79Q9P2D8 2635 aa4.72□□□□□ -1.65
CACNA1D-227ENST00000637844 GRIFINA4D1Z8 144 aa4.72□□□□□ -1.65
CACNA1D-227ENST00000637844 SAP30O75446 220 aa4.72□□□□□ -1.65
CACNA1D-227ENST00000637844 PF4P02776 101 aa4.72□□□□□ -1.65
CACNA1D-227ENST00000637844 FRMD6-AS1P0C7T7 363 aa4.72□□□□□ -1.65
CACNA1D-227ENST00000637844 IGLC6P0CF74 106 aa4.72□□□□□ -1.65
CACNA1D-227ENST00000637844 SMIM6P0DI80 62 aa4.72□□□□□ -1.65
CACNA1D-227ENST00000637844 CD33P20138 364 aa4.72□□□□□ -1.65
CACNA1D-227ENST00000637844 ASIPP42127 132 aa4.72□□□□□ -1.65
CACNA1D-227ENST00000637844 CDKN1BP46527 198 aa4.72□□□□□ -1.65
CACNA1D-227ENST00000637844 DEFB131AP59861 70 aa4.72□□□□□ -1.65
CACNA1D-227ENST00000637844 SLAQ13239 276 aa4.72□□□□□ -1.65
CACNA1D-227ENST00000637844 DEFB114Q30KQ6 69 aa4.72□□□□□ -1.65
CACNA1D-227ENST00000637844 KIAA1644Q3SXP7 199 aa4.72□□□□□ -1.65
CACNA1D-227ENST00000637844 SPANXN1Q5VSR9 72 aa4.72□□□□□ -1.65
CACNA1D-227ENST00000637844 TMEM61Q8N0U2 210 aa4.72□□□□□ -1.65
CACNA1D-227ENST00000637844 ZFAND2AQ8N6M9 145 aa4.72□□□□□ -1.65
CACNA1D-227ENST00000637844 OR2K2Q8NGT1 345 aa4.72□□□□□ -1.65
CACNA1D-227ENST00000637844 SSBP4Q9BWG4 385 aaPredicted RBP4.72□□□□□ -1.65
CACNA1D-227ENST00000637844 LOC102724200A0A096LPH7 203 aaPredicted RBP4.71□□□□□ -1.66
CACNA1D-227ENST00000637844 IGKV3D-20A0A0C4DH25 116 aa4.71□□□□□ -1.66
CACNA1D-227ENST00000637844 C7orf71A4D174 169 aa4.71□□□□□ -1.66
CACNA1D-227ENST00000637844 KLLNB2CW77 178 aa4.71□□□□□ -1.66
CACNA1D-227ENST00000637844 IGKV3-20P01619 116 aa4.71□□□□□ -1.66
CACNA1D-227ENST00000637844 OR5AL1P0C617 328 aa4.71□□□□□ -1.66
CACNA1D-227ENST00000637844 MED14OSP0DP75 135 aa4.71□□□□□ -1.66
CACNA1D-227ENST00000637844 HLA-DRB4P13762 266 aa4.71□□□□□ -1.66
CACNA1D-227ENST00000637844 FABP4P15090 132 aa4.71□□□□□ -1.66
CACNA1D-227ENST00000637844 SSTP61278 116 aa4.71□□□□□ -1.66
CACNA1D-227ENST00000637844 CD300EQ496F6 205 aaPredicted RBP4.71□□□□□ -1.66
CACNA1D-227ENST00000637844 GDF5OSQ5U4N7 250 aa4.71□□□□□ -1.66
CACNA1D-227ENST00000637844 ADAMTSL5Q6ZMM2 481 aa4.71□□□□□ -1.66
CACNA1D-227ENST00000637844 ZNF493Q6ZR52 646 aa4.71□□□□□ -1.66
CACNA1D-227ENST00000637844 PACRGQ96M98 296 aaPredicted RBP4.71□□□□□ -1.66
CACNA1D-227ENST00000637844 ALKBH7Q9BT30 221 aaPredicted RBP4.71□□□□□ -1.66
CACNA1D-227ENST00000637844 SAMD10Q9BYL1 202 aa4.71□□□□□ -1.66
CACNA1D-227ENST00000637844 MAP6D1Q9H9H5 199 aa4.71□□□□□ -1.66
CACNA1D-227ENST00000637844 PHLDA3Q9Y5J5 127 aa4.71□□□□□ -1.66
CACNA1D-227ENST00000637844 HLA-DRB4X5D2U9 266 aa4.71□□□□□ -1.66
CACNA1D-227ENST00000637844 NBPF19A0A087WUL8 3843 aa4.71□□□□□ -1.66
CACNA1D-227ENST00000637844 SVEP1Q4LDE5 3571 aa4.7□□□□□ -1.66
CACNA1D-227ENST00000637844 CREBBPQ92793 2442 aa4.7□□□□□ -1.66
CACNA1D-227ENST00000637844 TRAV12-3A0A0B4J271 114 aa4.7□□□□□ -1.66
CACNA1D-227ENST00000637844 OR11H12B2RN74 326 aa4.7□□□□□ -1.66
CACNA1D-227ENST00000637844 H3BVH4 76 aa4.7□□□□□ -1.66
CACNA1D-227ENST00000637844 HSBP1O75506 76 aa4.7□□□□□ -1.66
CACNA1D-227ENST00000637844 SERF1AO75920 110 aa4.7□□□□□ -1.66
CACNA1D-227ENST00000637844 AMBPP02760 352 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms