RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 WI2-2373I1.2A0A1W2PRP0 233 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 LINC01546A6NGU7 62 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 LINC01548A6NM66 108 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 SRRM4A7MD48 611 aaKnown RBP1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 LYRM9A8MSI8 78 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 C12orf77C9JDV5 145 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 INS-IGF2F8WCM5 200 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 UPK2O00526 184 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 MRPS12O15235 138 aaKnown RBP1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 NBR2O15453 112 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 CCL16O15467 120 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 NDUFB3O43676 98 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 BUB3O43684 328 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 MRPL33O75394 65 aaKnown RBP1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 PRSS2P07478 247 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 B4GALT1P15291 398 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 CD24P25063 80 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 SSR4P51571 173 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 NANOS2P60321 138 aaKnown RBP1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 HIST1H4AP62805 103 aaKnown RBP1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 FKBP1BP68106 108 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 RBM3P98179 157 aaKnown RBP1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 CD164Q04900 197 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 PMAIP1Q13794 54 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 PDE6HQ13956 83 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 EBI3Q14213 229 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 DEFB110Q30KQ9 67 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 DEFB121Q5J5C9 76 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 SPANXN1Q5VSR9 72 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 MORN5Q5VZ52 161 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 RNF182Q8N6D2 247 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 RNF152Q8N8N0 203 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 SLC25A29Q8N8R3 303 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 ZNF441Q8N8Z8 693 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 MBD3L2Q8NHZ7 208 aaPredicted RBP1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 LINC01600Q96MT4 127 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 SLC50A1Q9BRV3 221 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 SHANK2-AS3Q9BTD1 123 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 DEFB126Q9BYW3 111 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 CXXC4Q9H2H0 198 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 TMEM14BQ9NUH8 114 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 TMEM14CQ9P0S9 112 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 DKK4Q9UBT3 224 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 RPUSD1Q9UJJ7 312 aaKnown RBP1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 HHLA3Q9XRX5 114 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 MOB4Q9Y3A3 225 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 ICOSQ9Y6W8 199 aa1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 MDC1Q14676 2089 aaKnown RBP1.6□□□□□ -2.15
SPTAN1-216ENST00000629047 PAPPA2Q9BXP8 1791 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 FANCMQ8IYD8 2048 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 ARID1AO14497 2285 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 IGHV1-45A0A0A0MS14 117 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 TRAV8-3A0A0A6YYJ7 113 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 TRGV5A0A0B4J1U4 118 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 TRAV3A0A0B4J244 114 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 TRAV41A0A0B4J266 112 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 IGHV1-69DA0A0B4J2H0 117 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 TMEM89A2RUT3 159 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 SDHAF1A6NFY7 115 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 C11orf86A6NJI1 115 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 ZNF785A8K8V0 405 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 DEFB108AA8MXU0 73 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 K7EM74 188 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 LEPROTO15243 131 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 BCE1O60756 84 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 SH2D1AO60880 128 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 IGHV3-30P01768 117 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 IGHV3-33P01772 117 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 IGKV3-11P04433 115 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 GRPP07492 148 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 IGHV3-30-5P0DP03 117 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 RNASE2P10153 161 aaKnown RBP1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 COL8A2P25067 703 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 CCL11P51671 97 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 EFNA4P52798 201 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 FXYD7P58549 80 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 LYZP61626 148 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 NUMA1Q14980 2115 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 RSPO1Q2MKA7 263 aaPredicted RBP1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 LCE1FQ5T754 118 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 PVRIGQ6DKI7 326 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 Q6JHZ5 121 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 GUSBP11Q6P575 273 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 ZNF826PQ6ZT77 177 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 IL17RELQ6ZVW7 336 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 C11orf53Q8IXP5 236 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 ZCCHC24Q8N2G6 241 aaKnown RBP1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 SLC25A45Q8N413 288 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 TMEM86BQ8N661 226 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 Q8N7P7 452 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 MAPKAPK5-AS1Q8N8E1 139 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 THAP8Q8NA92 274 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 RFESDQ8TAC1 157 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 FGFBP3Q8TAT2 258 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 C10orf105Q8TEF2 133 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 ITLN1Q8WWA0 313 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 TOMM6Q96B49 74 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 RITA1Q96K30 269 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 FAM167A-AS1Q96KT0 104 aa1.59□□□□□ -2.15
SPTAN1-216ENST00000629047 DSCR8Q96T75 97 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms