RNA–Protein interactions for RNA: ENST00000623266.1

PCDHB9-202, Transcript of protocadherin beta 9, humanhuman

TSL 4

Gene PCDHB9, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-202ENST00000623266 TMEM78Q5T7P6 136 aa6.19□□□□□ -1.42
PCDHB9-202ENST00000623266 STX12Q86Y82 276 aa6.19□□□□□ -1.42
PCDHB9-202ENST00000623266 IQCF2Q8IXL9 164 aa6.19□□□□□ -1.42
PCDHB9-202ENST00000623266 PHYHIPLQ96FC7 376 aa6.19□□□□□ -1.42
PCDHB9-202ENST00000623266 ZNF479Q96JC4 524 aa6.19□□□□□ -1.42
PCDHB9-202ENST00000623266 C8orf49Q96NF6 230 aa6.19□□□□□ -1.42
PCDHB9-202ENST00000623266 RGS13O14921 159 aa6.18□□□□□ -1.42
PCDHB9-202ENST00000623266 EIF3GO75821 320 aaKnown RBP eCLIP6.18□□□□□ -1.42
PCDHB9-202ENST00000623266 SFTA3P0C7M3 94 aa6.18□□□□□ -1.42
PCDHB9-202ENST00000623266 RANP62826 216 aaKnown RBP6.18□□□□□ -1.42
PCDHB9-202ENST00000623266 IFITM3Q01628 133 aa6.18□□□□□ -1.42
PCDHB9-202ENST00000623266 SLAQ13239 276 aa6.18□□□□□ -1.42
PCDHB9-202ENST00000623266 ZNF266Q14584 549 aa6.18□□□□□ -1.42
PCDHB9-202ENST00000623266 MUC21Q5SSG8 566 aa6.18□□□□□ -1.42
PCDHB9-202ENST00000623266 LYPD1Q8N2G4 141 aa6.18□□□□□ -1.42
PCDHB9-202ENST00000623266 Q8TAT8 98 aa6.18□□□□□ -1.42
PCDHB9-202ENST00000623266 RASL10AQ92737 203 aa6.18□□□□□ -1.42
PCDHB9-202ENST00000623266 PAXXQ9BUH6 204 aa6.18□□□□□ -1.42
PCDHB9-202ENST00000623266 CCDC32Q9BV29 185 aa6.18□□□□□ -1.42
PCDHB9-202ENST00000623266 WDR61Q9GZS3 305 aaKnown RBP6.18□□□□□ -1.42
PCDHB9-202ENST00000623266 AAMDCQ9H7C9 122 aa6.18□□□□□ -1.42
PCDHB9-202ENST00000623266 NDUFA13Q9P0J0 144 aa6.18□□□□□ -1.42
PCDHB9-202ENST00000623266 ICOSQ9Y6W8 199 aa6.18□□□□□ -1.42
PCDHB9-202ENST00000623266 TRBV7-9A0A0J9YWB2 115 aa6.17□□□□□ -1.42
PCDHB9-202ENST00000623266 E5RGE8 158 aa6.17□□□□□ -1.42
PCDHB9-202ENST00000623266 K7EQD1 137 aa6.17□□□□□ -1.42
PCDHB9-202ENST00000623266 GNRH2O43555 120 aa6.17□□□□□ -1.42
PCDHB9-202ENST00000623266 KRTAP10-1P60331 282 aa6.17□□□□□ -1.42
PCDHB9-202ENST00000623266 MRPL23Q16540 153 aaKnown RBP6.17□□□□□ -1.42
PCDHB9-202ENST00000623266 NEGR1Q7Z3B1 354 aa6.17□□□□□ -1.42
PCDHB9-202ENST00000623266 NMES1Q9C002 83 aa6.17□□□□□ -1.42
PCDHB9-202ENST00000623266 A0A087WTM6 91 aa6.16□□□□□ -1.42
PCDHB9-202ENST00000623266 RBAKDNA6NC62 111 aa6.16□□□□□ -1.42
PCDHB9-202ENST00000623266 DIRC3C9JPN6 131 aa6.16□□□□□ -1.42
PCDHB9-202ENST00000623266 DNAH10OSP0CZ25 163 aa6.16□□□□□ -1.42
PCDHB9-202ENST00000623266 H2BFSP57053 126 aa6.16□□□□□ -1.42
PCDHB9-202ENST00000623266 ASAH1Q13510 395 aa6.16□□□□□ -1.42
PCDHB9-202ENST00000623266 Q6AWC8 147 aa6.16□□□□□ -1.42
PCDHB9-202ENST00000623266 WFDC10BQ8IUB3 73 aa6.16□□□□□ -1.42
PCDHB9-202ENST00000623266 OR10G4Q8NGN3 311 aa6.16□□□□□ -1.42
PCDHB9-202ENST00000623266 TVP23CQ96ET8 276 aa6.16□□□□□ -1.42
PCDHB9-202ENST00000623266 SLC25A31Q9H0C2 315 aa6.16□□□□□ -1.42
PCDHB9-202ENST00000623266 MYCBP2O75592 4640 aa6.15□□□□□ -1.42
PCDHB9-202ENST00000623266 TRGV4A0A0C4DH28 118 aa6.15□□□□□ -1.42
PCDHB9-202ENST00000623266 LOC100131303A0A0U1RQF7 123 aa6.15□□□□□ -1.42
PCDHB9-202ENST00000623266 PGPA6NDG6 321 aa6.15□□□□□ -1.42
PCDHB9-202ENST00000623266 EPM2AB3EWF7 344 aa6.15□□□□□ -1.42
PCDHB9-202ENST00000623266 TMEM183BQ1AE95 376 aa6.15□□□□□ -1.42
PCDHB9-202ENST00000623266 LRRC37A5PQ49AS3 106 aa6.15□□□□□ -1.42
PCDHB9-202ENST00000623266 MZT2BQ6NZ67 158 aa6.15□□□□□ -1.42
PCDHB9-202ENST00000623266 LINC00299Q6ZSB3 139 aa6.15□□□□□ -1.42
PCDHB9-202ENST00000623266 TMEM183AQ8IXX5 376 aa6.15□□□□□ -1.42
PCDHB9-202ENST00000623266 SPXQ9BT56 116 aa6.15□□□□□ -1.42
PCDHB9-202ENST00000623266 WFDC1Q9HC57 220 aa6.15□□□□□ -1.42
PCDHB9-202ENST00000623266 LENEPQ9Y5L5 61 aa6.15□□□□□ -1.42
PCDHB9-202ENST00000623266 SRRM2Q9UQ35 2752 aaKnown RBP6.14□□□□□ -1.43
PCDHB9-202ENST00000623266 OR7C2O60412 319 aa6.14□□□□□ -1.43
PCDHB9-202ENST00000623266 GYPEP15421 78 aa6.14□□□□□ -1.43
PCDHB9-202ENST00000623266 ZNF415Q09FC8 603 aa6.14□□□□□ -1.43
PCDHB9-202ENST00000623266 TDRG1Q3Y452 100 aa6.14□□□□□ -1.43
PCDHB9-202ENST00000623266 PPP1R1CQ8WVI7 109 aa6.14□□□□□ -1.43
PCDHB9-202ENST00000623266 ARPC5LQ9BPX5 153 aa6.14□□□□□ -1.43
PCDHB9-202ENST00000623266 MBD2Q9UBB5 411 aa6.14□□□□□ -1.43
PCDHB9-202ENST00000623266 LY96Q9Y6Y9 160 aa6.14□□□□□ -1.43
PCDHB9-202ENST00000623266 TRAV9-2A0A087WT02 112 aa6.13□□□□□ -1.43
PCDHB9-202ENST00000623266 IGHV3-16A0A0C4DH30 117 aa6.13□□□□□ -1.43
PCDHB9-202ENST00000623266 LRCOL1A6NCL2 159 aa6.13□□□□□ -1.43
PCDHB9-202ENST00000623266 INMT-MINDY4F8WBC2 141 aa6.13□□□□□ -1.43
PCDHB9-202ENST00000623266 MPC2O95563 127 aa6.13□□□□□ -1.43
PCDHB9-202ENST00000623266 SMR3BP02814 79 aaPredicted RBP6.13□□□□□ -1.43
PCDHB9-202ENST00000623266 INAFM2P0DMQ5 153 aa6.13□□□□□ -1.43
PCDHB9-202ENST00000623266 CSN1S1P47710 185 aa6.13□□□□□ -1.43
PCDHB9-202ENST00000623266 ERVFC1-1P60608 527 aa6.13□□□□□ -1.43
PCDHB9-202ENST00000623266 CYCSP99999 105 aaKnown RBP6.13□□□□□ -1.43
PCDHB9-202ENST00000623266 FFAR4Q5NUL3 377 aa6.13□□□□□ -1.43
PCDHB9-202ENST00000623266 FAM159AQ6UWV7 190 aa6.13□□□□□ -1.43
PCDHB9-202ENST00000623266 NFE4Q86UQ8 179 aa6.13□□□□□ -1.43
PCDHB9-202ENST00000623266 HYLS1Q96M11 299 aa6.13□□□□□ -1.43
PCDHB9-202ENST00000623266 MARVELD1Q9BSK0 173 aa6.13□□□□□ -1.43
PCDHB9-202ENST00000623266 MSRB1Q9NZV6 116 aa6.13□□□□□ -1.43
PCDHB9-202ENST00000623266 HSPB11Q9Y547 144 aa6.13□□□□□ -1.43
PCDHB9-202ENST00000623266 TRAV8-1A0A0A6YYK1 113 aa6.12□□□□□ -1.43
PCDHB9-202ENST00000623266 TRAV4A0A0B4J268 109 aa6.12□□□□□ -1.43
PCDHB9-202ENST00000623266 C17orf112F2Z3M2 114 aa6.12□□□□□ -1.43
PCDHB9-202ENST00000623266 EREGO14944 169 aa6.12□□□□□ -1.43
PCDHB9-202ENST00000623266 UPK1BO75841 260 aa6.12□□□□□ -1.43
PCDHB9-202ENST00000623266 SRIP30626 198 aa6.12□□□□□ -1.43
PCDHB9-202ENST00000623266 CDPF1Q6NVV7 123 aa6.12□□□□□ -1.43
PCDHB9-202ENST00000623266 DPPA3Q6W0C5 159 aa6.12□□□□□ -1.43
PCDHB9-202ENST00000623266 OR4C5Q8NGB2 326 aa6.12□□□□□ -1.43
PCDHB9-202ENST00000623266 TMED6Q8WW62 240 aa6.12□□□□□ -1.43
PCDHB9-202ENST00000623266 ATP5SQ99766 215 aa6.12□□□□□ -1.43
PCDHB9-202ENST00000623266 SMIM3Q9BZL3 60 aa6.12□□□□□ -1.43
PCDHB9-202ENST00000623266 OTORQ9NRC9 128 aa6.12□□□□□ -1.43
PCDHB9-202ENST00000623266 C11orf21Q9P2W6 132 aa6.12□□□□□ -1.43
PCDHB9-202ENST00000623266 K7EP13 123 aa6.11□□□□□ -1.43
PCDHB9-202ENST00000623266 M0R2P5 195 aa6.11□□□□□ -1.43
PCDHB9-202ENST00000623266 ORM1P02763 201 aa6.11□□□□□ -1.43
PCDHB9-202ENST00000623266 TYMSP04818 313 aa6.11□□□□□ -1.43
PCDHB9-202ENST00000623266 GATA1P15976 413 aaPredicted RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms