RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 PHLDA1Q8WV24 401 aaPredicted RBP10.51□□□□□ -0.73
PCDHA11-202ENST00000616325 HOXA3O43365 443 aaPredicted RBP10.51□□□□□ -0.73
PCDHA11-202ENST00000616325 SCGB1C2P0DMR2 95 aa10.51□□□□□ -0.73
PCDHA11-202ENST00000616325 A0A1B0GW15 77 aa10.5□□□□□ -0.73
PCDHA11-202ENST00000616325 TNFRSF6BO95407 300 aa10.5□□□□□ -0.73
PCDHA11-202ENST00000616325 C3orf36Q3SXR2 165 aa10.5□□□□□ -0.73
PCDHA11-202ENST00000616325 TEX36Q5VZQ5 186 aa10.5□□□□□ -0.73
PCDHA11-202ENST00000616325 RNASE6Q93091 150 aaKnown RBP10.5□□□□□ -0.73
PCDHA11-202ENST00000616325 IGHV1-3A0A0C4DH29 117 aa10.5□□□□□ -0.73
PCDHA11-202ENST00000616325 FAM90A27PA6NNH2 459 aa10.5□□□□□ -0.73
PCDHA11-202ENST00000616325 HLA-DMBP28068 263 aa10.5□□□□□ -0.73
PCDHA11-202ENST00000616325 FOXI1Q12951 378 aa10.5□□□□□ -0.73
PCDHA11-202ENST00000616325 COL27A1Q8IZC6 1860 aaPredicted RBP10.5□□□□□ -0.73
PCDHA11-202ENST00000616325 PRSS29PA6NIE9 313 aa10.49□□□□□ -0.73
PCDHA11-202ENST00000616325 LINC01549A6NIU2 74 aa10.49□□□□□ -0.73
PCDHA11-202ENST00000616325 TIMM23O14925 209 aa10.49□□□□□ -0.73
PCDHA11-202ENST00000616325 ARL3P36405 182 aa10.49□□□□□ -0.73
PCDHA11-202ENST00000616325 RRN3P1Q2M238 152 aa10.49□□□□□ -0.73
PCDHA11-202ENST00000616325 ZFP2Q6ZN57 461 aa10.49□□□□□ -0.73
PCDHA11-202ENST00000616325 VSTM5A8MXK1 200 aa10.49□□□□□ -0.73
PCDHA11-202ENST00000616325 Q6AWC8 147 aa10.49□□□□□ -0.73
PCDHA11-202ENST00000616325 VKORC1Q9BQB6 163 aa10.49□□□□□ -0.73
PCDHA11-202ENST00000616325 LINC01548A6NM66 108 aa10.49□□□□□ -0.73
PCDHA11-202ENST00000616325 H7C2G1 150 aa10.49□□□□□ -0.73
PCDHA11-202ENST00000616325 XGP55808 180 aa10.48□□□□□ -0.73
PCDHA11-202ENST00000616325 ZNF502Q8TBZ5 544 aa10.48□□□□□ -0.73
PCDHA11-202ENST00000616325 SPRY2O43597 315 aa10.48□□□□□ -0.73
PCDHA11-202ENST00000616325 SIGLEC15Q6ZMC9 328 aa10.48□□□□□ -0.73
PCDHA11-202ENST00000616325 SPTBN4Q9H254 2564 aa10.48□□□□□ -0.73
PCDHA11-202ENST00000616325 TRBV20-1A0A075B6N2 111 aa10.48□□□□□ -0.73
PCDHA11-202ENST00000616325 OR11H12B2RN74 326 aa10.48□□□□□ -0.73
PCDHA11-202ENST00000616325 IGKV1-17P01599 117 aa10.48□□□□□ -0.73
PCDHA11-202ENST00000616325 HLA-DRB4P13762 266 aa10.48□□□□□ -0.73
PCDHA11-202ENST00000616325 PRTN3P24158 256 aa10.48□□□□□ -0.73
PCDHA11-202ENST00000616325 OR11H1Q8NG94 326 aa10.48□□□□□ -0.73
PCDHA11-202ENST00000616325 OR11H2Q8NH07 326 aa10.48□□□□□ -0.73
PCDHA11-202ENST00000616325 TM2D2Q9BX73 214 aa10.48□□□□□ -0.73
PCDHA11-202ENST00000616325 HLA-DRB4X5D2U9 266 aa10.48□□□□□ -0.73
PCDHA11-202ENST00000616325 THBDP07204 575 aa10.47□□□□□ -0.73
PCDHA11-202ENST00000616325 RNF125Q96EQ8 232 aa10.47□□□□□ -0.73
PCDHA11-202ENST00000616325 DOPEY2Q9Y3R5 2298 aa10.47□□□□□ -0.73
PCDHA11-202ENST00000616325 OVOL3O00110 214 aa10.47□□□□□ -0.73
PCDHA11-202ENST00000616325 ZNF80P51504 273 aaPredicted RBP10.47□□□□□ -0.73
PCDHA11-202ENST00000616325 TCTEX1D4Q5JR98 221 aa10.47□□□□□ -0.73
PCDHA11-202ENST00000616325 NFE4Q86UQ8 179 aa10.47□□□□□ -0.73
PCDHA11-202ENST00000616325 E7EQL1 145 aa10.46□□□□□ -0.73
PCDHA11-202ENST00000616325 EMP1P54849 157 aa10.46□□□□□ -0.73
PCDHA11-202ENST00000616325 TMEM155Q4W5P6 130 aa10.46□□□□□ -0.73
PCDHA11-202ENST00000616325 IGFL2Q6UWQ7 119 aa10.46□□□□□ -0.73
PCDHA11-202ENST00000616325 KIR2DL4Q99706 377 aa10.46□□□□□ -0.73
PCDHA11-202ENST00000616325 HIGD1BQ9P298 99 aa10.46□□□□□ -0.73
PCDHA11-202ENST00000616325 ZNF493Q6ZR52 646 aa10.46□□□□□ -0.73
PCDHA11-202ENST00000616325 FAM57AQ8TBR7 257 aa10.46□□□□□ -0.73
PCDHA11-202ENST00000616325 ERCC8Q13216 396 aa10.46□□□□□ -0.74
PCDHA11-202ENST00000616325 BUB1B-PAK6H3BSN5 160 aa10.45□□□□□ -0.74
PCDHA11-202ENST00000616325 GRNP28799 593 aaKnown RBP10.45□□□□□ -0.74
PCDHA11-202ENST00000616325 Q6ZUT4 128 aa10.45□□□□□ -0.74
PCDHA11-202ENST00000616325 CSPG4Q6UVK1 2322 aa10.45□□□□□ -0.74
PCDHA11-202ENST00000616325 MRGPRG-AS1Q2M3A8 158 aa10.45□□□□□ -0.74
PCDHA11-202ENST00000616325 HIF1ANQ9NWT6 349 aa10.45□□□□□ -0.74
PCDHA11-202ENST00000616325 TEX22C9J3V5 150 aa10.45□□□□□ -0.74
PCDHA11-202ENST00000616325 C1orf122Q6ZSJ8 110 aa10.45□□□□□ -0.74
PCDHA11-202ENST00000616325 SORL1Q92673 2214 aa10.44□□□□□ -0.74
PCDHA11-202ENST00000616325 BSNQ9UPA5 3926 aa10.44□□□□□ -0.74
PCDHA11-202ENST00000616325 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.44□□□□□ -0.74
PCDHA11-202ENST00000616325 DLX4Q92988 240 aaPredicted RBP10.44□□□□□ -0.74
PCDHA11-202ENST00000616325 SHANK2-AS3Q9BTD1 123 aa10.44□□□□□ -0.74
PCDHA11-202ENST00000616325 C1QTNF4Q9BXJ3 329 aa10.44□□□□□ -0.74
PCDHA11-202ENST00000616325 CDIP1Q9H305 208 aa10.44□□□□□ -0.74
PCDHA11-202ENST00000616325 NXT2Q9NPJ8 142 aaKnown RBP10.44□□□□□ -0.74
PCDHA11-202ENST00000616325 ATP5LO75964 103 aa10.44□□□□□ -0.74
PCDHA11-202ENST00000616325 CRYGCP07315 174 aa10.44□□□□□ -0.74
PCDHA11-202ENST00000616325 Q6ZS92 163 aa10.44□□□□□ -0.74
PCDHA11-202ENST00000616325 DTX2Q86UW9 622 aa10.44□□□□□ -0.74
PCDHA11-202ENST00000616325 TEX29Q8N6K0 151 aa10.44□□□□□ -0.74
PCDHA11-202ENST00000616325 IGKV3-7A0A075B6H7 116 aa10.43□□□□□ -0.74
PCDHA11-202ENST00000616325 LINC00574Q9H8X3 128 aa10.43□□□□□ -0.74
PCDHA11-202ENST00000616325 RAXQ9Y2V3 346 aa10.43□□□□□ -0.74
PCDHA11-202ENST00000616325 KLHL30-AS1Q8NEE0 82 aa10.43□□□□□ -0.74
PCDHA11-202ENST00000616325 PRR25Q96S07 402 aa10.43□□□□□ -0.74
PCDHA11-202ENST00000616325 ECSCRQ19T08 205 aa10.43□□□□□ -0.74
PCDHA11-202ENST00000616325 RNF182Q8N6D2 247 aa10.43□□□□□ -0.74
PCDHA11-202ENST00000616325 U3KQK5 164 aa10.43□□□□□ -0.74
PCDHA11-202ENST00000616325 ZNF815PA8K554 130 aa10.42□□□□□ -0.74
PCDHA11-202ENST00000616325 TRGV3P03979 118 aa10.42□□□□□ -0.74
PCDHA11-202ENST00000616325 FHL3Q13643 280 aa10.42□□□□□ -0.74
PCDHA11-202ENST00000616325 SCGB2A1O75556 95 aa10.42□□□□□ -0.74
PCDHA11-202ENST00000616325 ZFAND6Q6FIF0 208 aa10.42□□□□□ -0.74
PCDHA11-202ENST00000616325 ZNF491Q8N8L2 437 aa10.42□□□□□ -0.74
PCDHA11-202ENST00000616325 NUP37Q8NFH4 326 aa10.42□□□□□ -0.74
PCDHA11-202ENST00000616325 PRO0461Q9UI25 63 aa10.42□□□□□ -0.74
PCDHA11-202ENST00000616325 I3L2K1 104 aa10.42□□□□□ -0.74
PCDHA11-202ENST00000616325 K7EIM0 57 aa10.42□□□□□ -0.74
PCDHA11-202ENST00000616325 SMCPP49901 116 aaPredicted RBP10.41□□□□□ -0.74
PCDHA11-202ENST00000616325 TMEM30BQ3MIR4 351 aa10.41□□□□□ -0.74
PCDHA11-202ENST00000616325 ASCL5Q7RTU5 278 aa10.41□□□□□ -0.74
PCDHA11-202ENST00000616325 RNF185Q96GF1 192 aa10.41□□□□□ -0.74
PCDHA11-202ENST00000616325 TMEM14CQ9P0S9 112 aa10.41□□□□□ -0.74
PCDHA11-202ENST00000616325 TRAV8-2A0A0B4J237 113 aa10.41□□□□□ -0.74
PCDHA11-202ENST00000616325 SPANXN1Q5VSR9 72 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms