RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 C14orf178Q8N769 122 aaPredicted RBP12.28□□□□□ -0.44
SYNRG-223ENST00000616179 DSPP15924 2871 aaKnown RBP12.28□□□□□ -0.44
SYNRG-223ENST00000616179 TRAV8-4A0A0B4J246 113 aa12.28□□□□□ -0.44
SYNRG-223ENST00000616179 IL17RELQ6ZVW7 336 aa12.28□□□□□ -0.44
SYNRG-223ENST00000616179 A0A087WX48 190 aa12.28□□□□□ -0.44
SYNRG-223ENST00000616179 TRGV3P03979 118 aa12.28□□□□□ -0.44
SYNRG-223ENST00000616179 CGB3P0DN86 165 aa12.28□□□□□ -0.44
SYNRG-223ENST00000616179 CGB7P0DN87 165 aa12.28□□□□□ -0.44
SYNRG-223ENST00000616179 NPC2P61916 151 aa12.28□□□□□ -0.44
SYNRG-223ENST00000616179 C16orf92Q96LL3 132 aa12.28□□□□□ -0.44
SYNRG-223ENST00000616179 F8VRH5 84 aa12.27□□□□□ -0.44
SYNRG-223ENST00000616179 PIP4P2Q8N4L2 257 aa12.27□□□□□ -0.44
SYNRG-223ENST00000616179 ZNF491Q8N8L2 437 aa12.27□□□□□ -0.44
SYNRG-223ENST00000616179 VCX2Q9H322 139 aa12.27□□□□□ -0.44
SYNRG-223ENST00000616179 TIMM23O14925 209 aa12.27□□□□□ -0.45
SYNRG-223ENST00000616179 OR11H6Q8NGC7 330 aa12.27□□□□□ -0.45
SYNRG-223ENST00000616179 NTN5Q8WTR8 489 aaPredicted RBP12.27□□□□□ -0.45
SYNRG-223ENST00000616179 RAB1BQ9H0U4 201 aa12.27□□□□□ -0.45
SYNRG-223ENST00000616179 REV3LO60673 3130 aa12.27□□□□□ -0.45
SYNRG-223ENST00000616179 IGHV1-8P0DP01 117 aa12.27□□□□□ -0.45
SYNRG-223ENST00000616179 ZNF80P51504 273 aaPredicted RBP12.27□□□□□ -0.45
SYNRG-223ENST00000616179 TMEM14CQ9P0S9 112 aa12.27□□□□□ -0.45
SYNRG-223ENST00000616179 DSCAMO60469 2012 aa12.27□□□□□ -0.45
SYNRG-223ENST00000616179 IGHV1-3A0A0C4DH29 117 aa12.27□□□□□ -0.45
SYNRG-223ENST00000616179 TAL2Q16559 108 aa12.27□□□□□ -0.45
SYNRG-223ENST00000616179 ANKRD29Q8N6D5 301 aa12.27□□□□□ -0.45
SYNRG-223ENST00000616179 PIEZO2Q9H5I5 2752 aa12.26□□□□□ -0.45
SYNRG-223ENST00000616179 C10orf142B7Z368 130 aa12.26□□□□□ -0.45
SYNRG-223ENST00000616179 TSPAN13O95857 204 aa12.26□□□□□ -0.45
SYNRG-223ENST00000616179 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.26□□□□□ -0.45
SYNRG-223ENST00000616179 LYPD1Q8N2G4 141 aa12.26□□□□□ -0.45
SYNRG-223ENST00000616179 C17orf100A8MU93 164 aa12.26□□□□□ -0.45
SYNRG-223ENST00000616179 SLC25A20O43772 301 aa12.26□□□□□ -0.45
SYNRG-223ENST00000616179 TEN1Q86WV5 123 aa12.26□□□□□ -0.45
SYNRG-223ENST00000616179 ERG28Q9UKR5 140 aa12.26□□□□□ -0.45
SYNRG-223ENST00000616179 SRSF6Q13247 344 aaKnown RBP12.26□□□□□ -0.45
SYNRG-223ENST00000616179 HHLA3Q9XRX5 114 aa12.26□□□□□ -0.45
SYNRG-223ENST00000616179 ZNF256Q9Y2P7 627 aaPredicted RBP12.26□□□□□ -0.45
SYNRG-223ENST00000616179 WI2-2373I1.2A0A1W2PRP0 233 aa12.25□□□□□ -0.45
SYNRG-223ENST00000616179 H3BRN7 92 aa12.25□□□□□ -0.45
SYNRG-223ENST00000616179 IFITM1P13164 125 aa12.25□□□□□ -0.45
SYNRG-223ENST00000616179 TMEM95Q3KNT9 176 aa12.25□□□□□ -0.45
SYNRG-223ENST00000616179 ADAMTS20P59510 1910 aa12.25□□□□□ -0.45
SYNRG-223ENST00000616179 ZNF493Q6ZR52 646 aa12.25□□□□□ -0.45
SYNRG-223ENST00000616179 GFRALQ6UXV0 394 aa12.25□□□□□ -0.45
SYNRG-223ENST00000616179 TDHQ8IZJ6 230 aa12.25□□□□□ -0.45
SYNRG-223ENST00000616179 C2orf66Q6UXQ4 117 aa12.24□□□□□ -0.45
SYNRG-223ENST00000616179 ARHGAP32A7KAX9 2087 aa12.24□□□□□ -0.45
SYNRG-223ENST00000616179 COL5A1P20908 1838 aaPredicted RBP12.24□□□□□ -0.45
SYNRG-223ENST00000616179 ORMDL2Q53FV1 153 aa12.24□□□□□ -0.45
SYNRG-223ENST00000616179 CFAP161Q6P656 301 aa12.24□□□□□ -0.45
SYNRG-223ENST00000616179 HTN1P15515 57 aa12.24□□□□□ -0.45
SYNRG-223ENST00000616179 C1orf210Q8IVY1 113 aa12.24□□□□□ -0.45
SYNRG-223ENST00000616179 COL4A2P08572 1712 aa12.24□□□□□ -0.45
SYNRG-223ENST00000616179 TRAV12-3A0A0B4J271 114 aa12.23□□□□□ -0.45
SYNRG-223ENST00000616179 TCF15Q12870 199 aa12.23□□□□□ -0.45
SYNRG-223ENST00000616179 ZNF56Q15929 161 aa12.23□□□□□ -0.45
SYNRG-223ENST00000616179 CR1LQ2VPA4 569 aa12.23□□□□□ -0.45
SYNRG-223ENST00000616179 MEIG1Q5JSS6 88 aa12.23□□□□□ -0.45
SYNRG-223ENST00000616179 ZNF474Q6S9Z5 364 aaPredicted RBP12.23□□□□□ -0.45
SYNRG-223ENST00000616179 LHBP01229 141 aa12.23□□□□□ -0.45
SYNRG-223ENST00000616179 IGLV2-23P01705 113 aa12.23□□□□□ -0.45
SYNRG-223ENST00000616179 ASCL5Q7RTU5 278 aa12.23□□□□□ -0.45
SYNRG-223ENST00000616179 CITED1Q99966 193 aa12.23□□□□□ -0.45
SYNRG-223ENST00000616179 K7EM74 188 aa12.23□□□□□ -0.45
SYNRG-223ENST00000616179 CFHR4Q92496 578 aa12.23□□□□□ -0.45
SYNRG-223ENST00000616179 DYNAPQ8N1N2 210 aa12.22□□□□□ -0.45
SYNRG-223ENST00000616179 WDFY3Q8IZQ1 3526 aa12.22□□□□□ -0.45
SYNRG-223ENST00000616179 TCL1BO95988 128 aa12.22□□□□□ -0.45
SYNRG-223ENST00000616179 TRPT1Q86TN4 253 aaKnown RBP12.22□□□□□ -0.45
SYNRG-223ENST00000616179 NFE4Q86UQ8 179 aa12.22□□□□□ -0.45
SYNRG-223ENST00000616179 C15orf53Q8NAA6 179 aa12.22□□□□□ -0.45
SYNRG-223ENST00000616179 C2CD3Q4AC94 2353 aa12.22□□□□□ -0.45
SYNRG-223ENST00000616179 C16orf97H3BN30 126 aa12.22□□□□□ -0.45
SYNRG-223ENST00000616179 LGALS1P09382 135 aaKnown RBP12.22□□□□□ -0.45
SYNRG-223ENST00000616179 C10orf126Q8N4M7 172 aa12.22□□□□□ -0.45
SYNRG-223ENST00000616179 IGLV1-44P01699 117 aa12.21□□□□□ -0.45
SYNRG-223ENST00000616179 PLEKHB2Q96CS7 222 aa12.21□□□□□ -0.45
SYNRG-223ENST00000616179 PTPRBP23467 1997 aa12.21□□□□□ -0.45
SYNRG-223ENST00000616179 COX6CP09669 75 aa12.21□□□□□ -0.46
SYNRG-223ENST00000616179 WT1P19544 449 aaPredicted RBP12.21□□□□□ -0.46
SYNRG-223ENST00000616179 NDPQ00604 133 aa12.21□□□□□ -0.46
SYNRG-223ENST00000616179 BSPH1Q075Z2 132 aa12.21□□□□□ -0.46
SYNRG-223ENST00000616179 TIMD4Q96H15 378 aa12.21□□□□□ -0.46
SYNRG-223ENST00000616179 ADIPOQQ15848 244 aa12.21□□□□□ -0.46
SYNRG-223ENST00000616179 CLEC19AQ6UXS0 136 aa12.21□□□□□ -0.46
SYNRG-223ENST00000616179 COL6A3P12111 3177 aa12.21□□□□□ -0.46
SYNRG-223ENST00000616179 PRAC2D3DTV9 90 aa12.2□□□□□ -0.46
SYNRG-223ENST00000616179 NBR2O15453 112 aa12.2□□□□□ -0.46
SYNRG-223ENST00000616179 LINC01559Q495D7 138 aa12.2□□□□□ -0.46
SYNRG-223ENST00000616179 FSTL3O95633 263 aa12.2□□□□□ -0.46
SYNRG-223ENST00000616179 C2orf82Q6UX34 121 aa12.2□□□□□ -0.46
SYNRG-223ENST00000616179 FAM159AQ6UWV7 190 aa12.2□□□□□ -0.46
SYNRG-223ENST00000616179 PRO1854Q9UHT4 67 aa12.2□□□□□ -0.46
SYNRG-223ENST00000616179 TRBV7-9A0A0J9YWB2 115 aa12.19□□□□□ -0.46
SYNRG-223ENST00000616179 CRYGCP07315 174 aa12.19□□□□□ -0.46
SYNRG-223ENST00000616179 CCDC179H3BU77 68 aa12.19□□□□□ -0.46
SYNRG-223ENST00000616179 SUMO2P61956 95 aaKnown RBP12.19□□□□□ -0.46
SYNRG-223ENST00000616179 RPL39LQ96EH5 51 aaKnown RBP12.19□□□□□ -0.46
SYNRG-223ENST00000616179 SMIM2Q9BVW6 85 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms