RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 K7EM74 188 aa10.3□□□□□ -0.76
MSH6-214ENST00000616033 OVOL3O00110 214 aa10.3□□□□□ -0.76
MSH6-214ENST00000616033 GATA4P43694 442 aa10.3□□□□□ -0.76
MSH6-214ENST00000616033 EMP1P54849 157 aa10.3□□□□□ -0.76
MSH6-214ENST00000616033 SORL1Q92673 2214 aa10.3□□□□□ -0.76
MSH6-214ENST00000616033 WI2-2373I1.2A0A1W2PRP0 233 aa10.3□□□□□ -0.76
MSH6-214ENST00000616033 SCGB1A1P11684 91 aa10.3□□□□□ -0.76
MSH6-214ENST00000616033 ODF1Q14990 250 aa10.3□□□□□ -0.76
MSH6-214ENST00000616033 ADIPOQQ15848 244 aa10.3□□□□□ -0.76
MSH6-214ENST00000616033 TEX22C9J3V5 150 aa10.3□□□□□ -0.76
MSH6-214ENST00000616033 CCDC179H3BU77 68 aa10.3□□□□□ -0.76
MSH6-214ENST00000616033 PRRG2O14669 202 aa10.3□□□□□ -0.76
MSH6-214ENST00000616033 ATP5J2P56134 94 aa10.3□□□□□ -0.76
MSH6-214ENST00000616033 Q6ZQT7 251 aa10.3□□□□□ -0.76
MSH6-214ENST00000616033 FAM215AQ9Y5M1 114 aa10.3□□□□□ -0.76
MSH6-214ENST00000616033 IGLL5B9A064 214 aa10.29□□□□□ -0.76
MSH6-214ENST00000616033 TMEM178BH3BS89 294 aa10.29□□□□□ -0.76
MSH6-214ENST00000616033 CEND1Q8N111 149 aa10.29□□□□□ -0.76
MSH6-214ENST00000616033 H7C2G1 150 aa10.29□□□□□ -0.76
MSH6-214ENST00000616033 TIMM23O14925 209 aa10.29□□□□□ -0.76
MSH6-214ENST00000616033 DPM2O94777 84 aa10.29□□□□□ -0.76
MSH6-214ENST00000616033 TRGV3P03979 118 aa10.29□□□□□ -0.76
MSH6-214ENST00000616033 TCF15Q12870 199 aa10.29□□□□□ -0.76
MSH6-214ENST00000616033 GAGE5Q13069 117 aa10.29□□□□□ -0.76
MSH6-214ENST00000616033 GAGE6Q13070 117 aa10.29□□□□□ -0.76
MSH6-214ENST00000616033 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.29□□□□□ -0.765e-7■□□□□ 10
MSH6-214ENST00000616033 I3L2K1 104 aa10.29□□□□□ -0.76
MSH6-214ENST00000616033 MYOZ3Q8TDC0 251 aa10.29□□□□□ -0.76
MSH6-214ENST00000616033 PRR25Q96S07 402 aa10.29□□□□□ -0.76
MSH6-214ENST00000616033 BRI3O95415 125 aa10.28□□□□□ -0.76
MSH6-214ENST00000616033 K7EIM0 57 aa10.28□□□□□ -0.76
MSH6-214ENST00000616033 RPL32P62910 135 aaKnown RBP10.28□□□□□ -0.76
MSH6-214ENST00000616033 C12orf74Q32Q52 190 aa10.28□□□□□ -0.76
MSH6-214ENST00000616033 TTC9CQ8N5M4 171 aa10.28□□□□□ -0.76
MSH6-214ENST00000616033 PRAC2D3DTV9 90 aa10.27□□□□□ -0.76
MSH6-214ENST00000616033 H3BRN7 92 aa10.27□□□□□ -0.76
MSH6-214ENST00000616033 KLRD1Q13241 179 aa10.27□□□□□ -0.76
MSH6-214ENST00000616033 MRPL23Q16540 153 aaKnown RBP10.27□□□□□ -0.76
MSH6-214ENST00000616033 GFRALQ6UXV0 394 aa10.27□□□□□ -0.76
MSH6-214ENST00000616033 SCGB1D4Q6XE38 83 aa10.27□□□□□ -0.76
MSH6-214ENST00000616033 PIP4P1Q86T03 277 aa10.27□□□□□ -0.76
MSH6-214ENST00000616033 TEX29Q8N6K0 151 aa10.27□□□□□ -0.76
MSH6-214ENST00000616033 HHLA3Q9XRX5 114 aa10.27□□□□□ -0.76
MSH6-214ENST00000616033 IGKV3-7A0A075B6H7 116 aa10.27□□□□□ -0.77
MSH6-214ENST00000616033 TEX36Q5VZQ5 186 aa10.27□□□□□ -0.77
MSH6-214ENST00000616033 Q6AWC8 147 aa10.27□□□□□ -0.77
MSH6-214ENST00000616033 PGPEP1Q9NXJ5 209 aa10.27□□□□□ -0.77
MSH6-214ENST00000616033 FOXC1Q12948 553 aa10.27□□□□□ -0.77
MSH6-214ENST00000616033 C5orf64Q2M2E5 130 aa10.27□□□□□ -0.77
MSH6-214ENST00000616033 ZNF502Q8TBZ5 544 aa10.27□□□□□ -0.77
MSH6-214ENST00000616033 VKORC1Q9BQB6 163 aa10.27□□□□□ -0.77
MSH6-214ENST00000616033 TCTEX1D4Q5JR98 221 aa10.26□□□□□ -0.77
MSH6-214ENST00000616033 FOXI2Q6ZQN5 318 aa10.26□□□□□ -0.77
MSH6-214ENST00000616033 SPG11Q96JI7 2443 aa10.26□□□□□ -0.77
MSH6-214ENST00000616033 A6NJY4 79 aa10.26□□□□□ -0.77
MSH6-214ENST00000616033 TMEM95Q3KNT9 176 aa10.26□□□□□ -0.77
MSH6-214ENST00000616033 Q6ZUT4 128 aa10.26□□□□□ -0.77
MSH6-214ENST00000616033 IL17RELQ6ZVW7 336 aa10.26□□□□□ -0.77
MSH6-214ENST00000616033 DTX2Q86UW9 622 aa10.26□□□□□ -0.77
MSH6-214ENST00000616033 TMEM14CQ9P0S9 112 aa10.26□□□□□ -0.77
MSH6-214ENST00000616033 SPANXN1Q5VSR9 72 aa10.25□□□□□ -0.77
MSH6-214ENST00000616033 LINC00574Q9H8X3 128 aa10.25□□□□□ -0.77
MSH6-214ENST00000616033 FHL3Q13643 280 aa10.25□□□□□ -0.77
MSH6-214ENST00000616033 ZFAND6Q6FIF0 208 aa10.25□□□□□ -0.77
MSH6-214ENST00000616033 ZNF493Q6ZR52 646 aa10.25□□□□□ -0.77
MSH6-214ENST00000616033 DOPEY2Q9Y3R5 2298 aa10.25□□□□□ -0.77
MSH6-214ENST00000616033 COL12A1Q99715 3063 aa10.25□□□□□ -0.77
MSH6-214ENST00000616033 INS-IGF2F8WCM5 200 aa10.24□□□□□ -0.77
MSH6-214ENST00000616033 BUB1B-PAK6H3BSN5 160 aa10.24□□□□□ -0.77
MSH6-214ENST00000616033 TMEM155Q4W5P6 130 aa10.24□□□□□ -0.77
MSH6-214ENST00000616033 DYNAPQ8N1N2 210 aa10.24□□□□□ -0.77
MSH6-214ENST00000616033 SPATA25Q9BR10 227 aa10.24□□□□□ -0.77
MSH6-214ENST00000616033 M0R381 172 aa10.24□□□□□ -0.77
MSH6-214ENST00000616033 MBD3L4A6NDZ8 208 aaPredicted RBP10.24□□□□□ -0.77
MSH6-214ENST00000616033 MBD3L3A6NE82 208 aaPredicted RBP10.24□□□□□ -0.77
MSH6-214ENST00000616033 MBD3L5A6NJ08 208 aaPredicted RBP10.24□□□□□ -0.77
MSH6-214ENST00000616033 SCGB1C2P0DMR2 95 aa10.24□□□□□ -0.77
MSH6-214ENST00000616033 HLA-DRB4P13762 266 aa10.24□□□□□ -0.77
MSH6-214ENST00000616033 TTC32Q5I0X7 151 aa10.24□□□□□ -0.77
MSH6-214ENST00000616033 MBD3L2Q8NHZ7 208 aaPredicted RBP10.24□□□□□ -0.77
MSH6-214ENST00000616033 RNF185Q96GF1 192 aa10.24□□□□□ -0.77
MSH6-214ENST00000616033 HLA-DRB4X5D2U9 266 aa10.24□□□□□ -0.77
MSH6-214ENST00000616033 CFHR4Q92496 578 aa10.23□□□□□ -0.77
MSH6-214ENST00000616033 DPF1Q92782 380 aa10.23□□□□□ -0.77
MSH6-214ENST00000616033 ERG28Q9UKR5 140 aa10.23□□□□□ -0.77
MSH6-214ENST00000616033 OR11H12B2RN74 326 aa10.23□□□□□ -0.77
MSH6-214ENST00000616033 F8W1H4 67 aa10.23□□□□□ -0.77
MSH6-214ENST00000616033 NFE4Q86UQ8 179 aa10.23□□□□□ -0.77
MSH6-214ENST00000616033 OR11H1Q8NG94 326 aa10.23□□□□□ -0.77
MSH6-214ENST00000616033 OR11H2Q8NH07 326 aa10.23□□□□□ -0.77
MSH6-214ENST00000616033 PTPRQQ9UMZ3 2332 aa10.23□□□□□ -0.77
MSH6-214ENST00000616033 LINC01549A6NIU2 74 aa10.23□□□□□ -0.77
MSH6-214ENST00000616033 FOXI1Q12951 378 aa10.23□□□□□ -0.77
MSH6-214ENST00000616033 KLHL30-AS1Q8NEE0 82 aa10.23□□□□□ -0.77
MSH6-214ENST00000616033 FABP5P3A8MUU1 101 aa10.22□□□□□ -0.77
MSH6-214ENST00000616033 MGPP08493 103 aa10.22□□□□□ -0.77
MSH6-214ENST00000616033 MFAP4P55083 255 aa10.22□□□□□ -0.77
MSH6-214ENST00000616033 DEFB1P60022 68 aa10.22□□□□□ -0.77
MSH6-214ENST00000616033 ECSCRQ19T08 205 aa10.22□□□□□ -0.77
MSH6-214ENST00000616033 ZFP2Q6ZN57 461 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms