RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 IGKV2D-24A0A075B6R9 120 aa7.58□□□□□ -1.2
TNFRSF9-204ENST00000615230 LYRM9A8MSI8 78 aa7.58□□□□□ -1.2
TNFRSF9-204ENST00000615230 KLF5Q13887 457 aaPredicted RBP7.58□□□□□ -1.2
TNFRSF9-204ENST00000615230 FXYD5Q96DB9 178 aa7.58□□□□□ -1.2
TNFRSF9-204ENST00000615230 CEP192Q8TEP8 1941 aa7.58□□□□□ -1.2
TNFRSF9-204ENST00000615230 PTPRSQ13332 1948 aa7.58□□□□□ -1.2
TNFRSF9-204ENST00000615230 ATXN8Q156A1 80 aa7.58□□□□□ -1.2
TNFRSF9-204ENST00000615230 C11orf68Q9H3H3 251 aaKnown RBP7.58□□□□□ -1.2
TNFRSF9-204ENST00000615230 TRAV12-2A0A075B6T6 113 aa7.58□□□□□ -1.2
TNFRSF9-204ENST00000615230 ANGP03950 147 aaKnown RBP7.58□□□□□ -1.2
TNFRSF9-204ENST00000615230 C21orf62-AS1Q17RA5 79 aa7.58□□□□□ -1.2
TNFRSF9-204ENST00000615230 BOD1L2Q8IYS8 172 aa7.58□□□□□ -1.2
TNFRSF9-204ENST00000615230 CRLF1O75462 422 aa7.58□□□□□ -1.2
TNFRSF9-204ENST00000615230 GAGE6Q13070 117 aa7.57□□□□□ -1.2
TNFRSF9-204ENST00000615230 PMVKQ15126 192 aa7.57□□□□□ -1.2
TNFRSF9-204ENST00000615230 FAM104BQ5XKR9 115 aa7.57□□□□□ -1.2
TNFRSF9-204ENST00000615230 LTAP01374 205 aa7.57□□□□□ -1.2
TNFRSF9-204ENST00000615230 PRR20EP86478 221 aa7.57□□□□□ -1.2
TNFRSF9-204ENST00000615230 PRR20CP86479 221 aa7.57□□□□□ -1.2
TNFRSF9-204ENST00000615230 PRR20DP86480 221 aa7.57□□□□□ -1.2
TNFRSF9-204ENST00000615230 PRR20BP86481 221 aa7.57□□□□□ -1.2
TNFRSF9-204ENST00000615230 PRR20AP86496 221 aa7.57□□□□□ -1.2
TNFRSF9-204ENST00000615230 ATP6V0E2Q8NHE4 81 aa7.57□□□□□ -1.2
TNFRSF9-204ENST00000615230 SIGLEC8Q9NYZ4 499 aa7.57□□□□□ -1.2
TNFRSF9-204ENST00000615230 POLR3KQ9Y2Y1 108 aaPredicted RBP7.57□□□□□ -1.2
TNFRSF9-204ENST00000615230 K7EIM0 57 aa7.57□□□□□ -1.2
TNFRSF9-204ENST00000615230 PRIMA1Q86XR5 153 aa7.57□□□□□ -1.2
TNFRSF9-204ENST00000615230 PSMG3-AS1Q96PY0 264 aa7.57□□□□□ -1.2
TNFRSF9-204ENST00000615230 C15orf53Q8NAA6 179 aa7.57□□□□□ -1.2
TNFRSF9-204ENST00000615230 C11orf45Q8TAV5 145 aa7.57□□□□□ -1.2
TNFRSF9-204ENST00000615230 SPANXA1Q9NS26 97 aa7.57□□□□□ -1.2
TNFRSF9-204ENST00000615230 LRRK1Q38SD2 2015 aa7.57□□□□□ -1.2
TNFRSF9-204ENST00000615230 TECTAO75443 2155 aa7.57□□□□□ -1.2
TNFRSF9-204ENST00000615230 SERF1AO75920 110 aa7.56□□□□□ -1.2
TNFRSF9-204ENST00000615230 TRAV8-1A0A0A6YYK1 113 aa7.56□□□□□ -1.2
TNFRSF9-204ENST00000615230 FGF23Q9GZV9 251 aaPredicted RBP7.56□□□□□ -1.2
TNFRSF9-204ENST00000615230 ZDBF2Q9HCK1 2354 aa7.56□□□□□ -1.2
TNFRSF9-204ENST00000615230 KNL1Q8NG31 2342 aa7.56□□□□□ -1.2
TNFRSF9-204ENST00000615230 CTSGP08311 255 aa7.56□□□□□ -1.2
TNFRSF9-204ENST00000615230 EBI3Q14213 229 aa7.56□□□□□ -1.2
TNFRSF9-204ENST00000615230 LYPD6Q86Y78 171 aa7.56□□□□□ -1.2
TNFRSF9-204ENST00000615230 TMEM263Q8WUH6 116 aaKnown RBP7.56□□□□□ -1.2
TNFRSF9-204ENST00000615230 SDHAF1A6NFY7 115 aa7.56□□□□□ -1.2
TNFRSF9-204ENST00000615230 GFI1BQ5VTD9 330 aa7.56□□□□□ -1.2
TNFRSF9-204ENST00000615230 NDUFAF3Q9BU61 184 aa7.56□□□□□ -1.2
TNFRSF9-204ENST00000615230 ASCC3Q8N3C0 2202 aaKnown RBP7.55□□□□□ -1.2
TNFRSF9-204ENST00000615230 IGHV3-16A0A0C4DH30 117 aa7.55□□□□□ -1.2
TNFRSF9-204ENST00000615230 HLA-DRB4P13762 266 aa7.55□□□□□ -1.2
TNFRSF9-204ENST00000615230 C9orf47Q6ZRZ4 202 aa7.55□□□□□ -1.2
TNFRSF9-204ENST00000615230 C11orf52Q96A22 123 aa7.55□□□□□ -1.2
TNFRSF9-204ENST00000615230 TP53TG1Q9Y2A0 90 aa7.55□□□□□ -1.2
TNFRSF9-204ENST00000615230 HLA-DRB4X5D2U9 266 aa7.55□□□□□ -1.2
TNFRSF9-204ENST00000615230 TEX22C9J3V5 150 aa7.55□□□□□ -1.2
TNFRSF9-204ENST00000615230 ERG28Q9UKR5 140 aa7.55□□□□□ -1.2
TNFRSF9-204ENST00000615230 HSD52Q0P140 79 aa7.55□□□□□ -1.2
TNFRSF9-204ENST00000615230 RNF183Q96D59 192 aa7.55□□□□□ -1.2
TNFRSF9-204ENST00000615230 H3BQ85 93 aa7.55□□□□□ -1.2
TNFRSF9-204ENST00000615230 APRG1Q8IVJ8 170 aa7.55□□□□□ -1.2
TNFRSF9-204ENST00000615230 MRPL36Q9P0J6 103 aaKnown RBP7.55□□□□□ -1.2
TNFRSF9-204ENST00000615230 C5orf30Q96GV9 206 aa7.55□□□□□ -1.2
TNFRSF9-204ENST00000615230 GSN-AS1Q9NRJ2 163 aa7.55□□□□□ -1.2
TNFRSF9-204ENST00000615230 TRBV6-1A0A0K0K1D8 114 aa7.54□□□□□ -1.2
TNFRSF9-204ENST00000615230 CXCL1P09341 107 aa7.54□□□□□ -1.2
TNFRSF9-204ENST00000615230 NCKAP5O14513 1909 aa7.54□□□□□ -1.2
TNFRSF9-204ENST00000615230 IGKV1OR2-108A0A075B7D4 117 aa7.54□□□□□ -1.2
TNFRSF9-204ENST00000615230 K7ERU9 68 aa7.54□□□□□ -1.2
TNFRSF9-204ENST00000615230 MIFP14174 115 aa7.54□□□□□ -1.2
TNFRSF9-204ENST00000615230 GYPEP15421 78 aa7.54□□□□□ -1.2
TNFRSF9-204ENST00000615230 BUB3O43684 328 aa7.54□□□□□ -1.2
TNFRSF9-204ENST00000615230 NFE4Q86UQ8 179 aa7.54□□□□□ -1.2
TNFRSF9-204ENST00000615230 LURAP1LQ8IV03 231 aa7.54□□□□□ -1.2
TNFRSF9-204ENST00000615230 TRAV4A0A0B4J268 109 aa7.54□□□□□ -1.2
TNFRSF9-204ENST00000615230 SEC16AO15027 2179 aa7.54□□□□□ -1.2
TNFRSF9-204ENST00000615230 HERV-K104P63124 156 aa7.53□□□□□ -1.2
TNFRSF9-204ENST00000615230 SMIM27A0A1W2PRY6 76 aa7.53□□□□□ -1.2
TNFRSF9-204ENST00000615230 VWC2LB2RUY7 222 aa7.53□□□□□ -1.2
TNFRSF9-204ENST00000615230 Q6ZSV7 163 aa7.53□□□□□ -1.2
TNFRSF9-204ENST00000615230 AMN1Q8IY45 258 aa7.53□□□□□ -1.2
TNFRSF9-204ENST00000615230 A0A0J9YY99 117 aa7.53□□□□□ -1.2
TNFRSF9-204ENST00000615230 UBE2BP63146 152 aa7.53□□□□□ -1.2
TNFRSF9-204ENST00000615230 SPTBP11277 2137 aa7.53□□□□□ -1.2
TNFRSF9-204ENST00000615230 CXCL5P42830 114 aa7.53□□□□□ -1.2
TNFRSF9-204ENST00000615230 LINC00518Q8N0U6 118 aa7.53□□□□□ -1.2
TNFRSF9-204ENST00000615230 MAP6D1Q9H9H5 199 aa7.53□□□□□ -1.2
TNFRSF9-204ENST00000615230 C2orf66Q6UXQ4 117 aa7.52□□□□□ -1.2
TNFRSF9-204ENST00000615230 ODF3L1Q8IXM7 274 aa7.52□□□□□ -1.2
TNFRSF9-204ENST00000615230 DMRT1Q9Y5R6 373 aa7.52□□□□□ -1.21
TNFRSF9-204ENST00000615230 PRSS29PA6NIE9 313 aa7.52□□□□□ -1.21
TNFRSF9-204ENST00000615230 H3BMM0 161 aa7.52□□□□□ -1.21
TNFRSF9-204ENST00000615230 DYNAPQ8N1N2 210 aa7.52□□□□□ -1.21
TNFRSF9-204ENST00000615230 AGPAT4-IT1Q9H0P7 198 aa7.52□□□□□ -1.21
TNFRSF9-204ENST00000615230 HHLA3Q9XRX5 114 aa7.52□□□□□ -1.21
TNFRSF9-204ENST00000615230 FAM19A2Q8N3H0 131 aa7.51□□□□□ -1.21
TNFRSF9-204ENST00000615230 TMEM126AQ9H061 195 aa7.51□□□□□ -1.21
TNFRSF9-204ENST00000615230 C16orf95Q9H693 158 aa7.51□□□□□ -1.21
TNFRSF9-204ENST00000615230 FREM3P0C091 2139 aa7.51□□□□□ -1.21
TNFRSF9-204ENST00000615230 GATD1Q8NB37 220 aa7.51□□□□□ -1.21
TNFRSF9-204ENST00000615230 TRAV10A0A0B4J240 114 aa7.51□□□□□ -1.21
TNFRSF9-204ENST00000615230 CCL25O15444 150 aa7.51□□□□□ -1.21
TNFRSF9-204ENST00000615230 TIRAPP58753 221 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms