RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 RNF185Q96GF1 192 aa2.61□□□□□ -1.99
VRK3-222ENST00000601324 LINC01587Q99440 93 aa2.61□□□□□ -1.99
VRK3-222ENST00000601324 VCX2Q9H322 139 aa2.61□□□□□ -1.99
VRK3-222ENST00000601324 RPRMQ9NS64 109 aa2.61□□□□□ -1.99
VRK3-222ENST00000601324 FKBP14Q9NWM8 211 aa2.61□□□□□ -1.99
VRK3-222ENST00000601324 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.6□□□□□ -1.99
VRK3-222ENST00000601324 A0A075B6Q4 140 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 TRAV5A0A0B4J249 113 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 PCP4L1A6NKN8 68 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 H7BYZ3 331 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 LECT2O14960 151 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 PSCAO43653 123 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 SPINK4O60575 86 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 IGKV1-5P01602 117 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 RLN2P04090 185 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 MYL12AP19105 171 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 PSMB9P28065 219 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 TALDO1P37837 337 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 OPRK1P41145 380 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 RND2P52198 227 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 OR10A3P58181 314 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 ST3GAL4Q11206 333 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 CIRBPQ14011 172 aaKnown RBP2.6□□□□□ -1.99
VRK3-222ENST00000601324 KIAA0087Q14695 138 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 MRPL23Q16540 153 aaKnown RBP2.6□□□□□ -1.99
VRK3-222ENST00000601324 HES5Q5TA89 166 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 CMTM1Q8IZ96 169 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 BPIFB6Q8NFQ5 453 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 OR10G9Q8NGN4 311 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 OR52E5Q8NH55 327 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 TMEM203Q969S6 136 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 C20orf144Q9BQM9 153 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 PRO0255Q9UI72 69 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 RAB26Q9ULW5 256 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 ANAPC10Q9UM13 185 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 KCNIP3Q9Y2W7 256 aa2.6□□□□□ -1.99
VRK3-222ENST00000601324 IRGMA1A4Y4 181 aa2.59□□□□□ -1.99
VRK3-222ENST00000601324 IFITM5A6NNB3 132 aa2.59□□□□□ -1.99
VRK3-222ENST00000601324 OR5AC1P0C628 307 aa2.59□□□□□ -1.99
VRK3-222ENST00000601324 RD3LP0DJH9 198 aa2.59□□□□□ -1.99
VRK3-222ENST00000601324 SLC25A4P12235 298 aa2.59□□□□□ -1.99
VRK3-222ENST00000601324 GADD45AP24522 165 aa2.59□□□□□ -1.99
VRK3-222ENST00000601324 PSMA1P25786 263 aaKnown RBP2.59□□□□□ -1.99
VRK3-222ENST00000601324 CDKN1BP46527 198 aa2.59□□□□□ -1.99
VRK3-222ENST00000601324 RPS25P62851 125 aaKnown RBP2.59□□□□□ -1.99
VRK3-222ENST00000601324 SAMD13Q5VXD3 122 aa2.59□□□□□ -1.99
VRK3-222ENST00000601324 CAMK2N1Q7Z7J9 78 aa2.59□□□□□ -1.99
VRK3-222ENST00000601324 IQCF2Q8IXL9 164 aa2.59□□□□□ -1.99
VRK3-222ENST00000601324 RNF182Q8N6D2 247 aa2.59□□□□□ -1.99
VRK3-222ENST00000601324 OR8A1Q8NGG7 326 aa2.59□□□□□ -1.99
VRK3-222ENST00000601324 MRGPRFQ96AM1 343 aa2.59□□□□□ -1.99
VRK3-222ENST00000601324 MRPL32Q9BYC8 188 aaKnown RBP2.59□□□□□ -1.99
VRK3-222ENST00000601324 FXYD6Q9H0Q3 95 aa2.59□□□□□ -1.99
VRK3-222ENST00000601324 BATF3Q9NR55 127 aa2.59□□□□□ -1.99
VRK3-222ENST00000601324 KLK12Q9UKR0 248 aa2.59□□□□□ -1.99
VRK3-222ENST00000601324 HTN1P15515 57 aa2.58□□□□□ -2
VRK3-222ENST00000601324 CXCL3P19876 107 aa2.58□□□□□ -2
VRK3-222ENST00000601324 BTCP35070 178 aa2.58□□□□□ -2
VRK3-222ENST00000601324 NUP62P37198 522 aaPredicted RBP2.58□□□□□ -2
VRK3-222ENST00000601324 SNCAP37840 140 aa2.58□□□□□ -2
VRK3-222ENST00000601324 FXYD4P59646 89 aa2.58□□□□□ -2
VRK3-222ENST00000601324 ARPC4P59998 168 aa2.58□□□□□ -2
VRK3-222ENST00000601324 FABP5Q01469 135 aa2.58□□□□□ -2
VRK3-222ENST00000601324 ZNF90Q03938 601 aa2.58□□□□□ -2
VRK3-222ENST00000601324 SLAQ13239 276 aa2.58□□□□□ -2
VRK3-222ENST00000601324 KRTAP13-3Q3SY46 172 aa2.58□□□□□ -2
VRK3-222ENST00000601324 DNAL1Q4LDG9 190 aa2.58□□□□□ -2
VRK3-222ENST00000601324 MARCH1Q8TCQ1 289 aa2.58□□□□□ -2
VRK3-222ENST00000601324 RNASEH2CQ8TDP1 164 aaKnown RBP2.58□□□□□ -2
VRK3-222ENST00000601324 BLNKQ8WV28 456 aa2.58□□□□□ -2
VRK3-222ENST00000601324 BAALCQ8WXS3 180 aa2.58□□□□□ -2
VRK3-222ENST00000601324 PARD6GQ9BYG4 376 aaPredicted RBP2.58□□□□□ -2
VRK3-222ENST00000601324 HHLA3Q9XRX5 114 aa2.58□□□□□ -2
VRK3-222ENST00000601324 FUT9Q9Y231 359 aa2.58□□□□□ -2
VRK3-222ENST00000601324 KLF12Q9Y4X4 402 aa2.58□□□□□ -2
VRK3-222ENST00000601324 IGKV1OR2-108A0A075B7D4 117 aa2.57□□□□□ -2
VRK3-222ENST00000601324 TRAV1-2A0A0B4J238 106 aa2.57□□□□□ -2
VRK3-222ENST00000601324 RBFOX3A6NFN3 312 aa2.57□□□□□ -2
VRK3-222ENST00000601324 GPR31O00270 319 aa2.57□□□□□ -2
VRK3-222ENST00000601324 MRPS12O15235 138 aaKnown RBP2.57□□□□□ -2
VRK3-222ENST00000601324 HTR2BP41595 481 aa2.57□□□□□ -2
VRK3-222ENST00000601324 SUB1P53999 127 aaKnown RBP eCLIP2.57□□□□□ -2
VRK3-222ENST00000601324 TCL1AP56279 114 aa2.57□□□□□ -2
VRK3-222ENST00000601324 OR2F1Q13607 317 aa2.57□□□□□ -2
VRK3-222ENST00000601324 ZNF846Q147U1 533 aa2.57□□□□□ -2
VRK3-222ENST00000601324 PSG3Q16557 428 aa2.57□□□□□ -2
VRK3-222ENST00000601324 NMSQ5H8A3 153 aa2.57□□□□□ -2
VRK3-222ENST00000601324 SFXN4Q6P4A7 337 aa2.57□□□□□ -2
VRK3-222ENST00000601324 SDIM1Q6ZPB5 146 aa2.57□□□□□ -2
VRK3-222ENST00000601324 H2BFWTQ7Z2G1 175 aa2.57□□□□□ -2
VRK3-222ENST00000601324 ARRDC1Q8N5I2 433 aa2.57□□□□□ -2
VRK3-222ENST00000601324 ZNF431Q8TF32 576 aaPredicted RBP2.57□□□□□ -2
VRK3-222ENST00000601324 RBPMSQ93062 196 aaKnown RBP2.57□□□□□ -2
VRK3-222ENST00000601324 DNAJC30Q96LL9 226 aa2.57□□□□□ -2
VRK3-222ENST00000601324 RSG1Q9BU20 258 aa2.57□□□□□ -2
VRK3-222ENST00000601324 EXTL2Q9UBQ6 330 aa2.57□□□□□ -2
VRK3-222ENST00000601324 TRGV2A0A075B6R0 118 aa2.56□□□□□ -2
VRK3-222ENST00000601324 TRGV1A0A0A0MS02 117 aa2.56□□□□□ -2
VRK3-222ENST00000601324 LINC00854A0A1B0GVQ3 168 aa2.56□□□□□ -2
VRK3-222ENST00000601324 MYL12BO14950 172 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms