RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 EIF3GO75821 320 aaKnown RBP eCLIP7.2□□□□□ -1.26
USE1-203ENST00000593597 SIX6O95475 246 aa7.2□□□□□ -1.26
USE1-203ENST00000593597 H2AFB2P0C5Z0 115 aa7.2□□□□□ -1.26
USE1-203ENST00000593597 NBEAP1P0C6P0 100 aa7.2□□□□□ -1.26
USE1-203ENST00000593597 ERVFC1-1P60608 527 aa7.2□□□□□ -1.26
USE1-203ENST00000593597 HAMPP81172 84 aa7.2□□□□□ -1.26
USE1-203ENST00000593597 ATP6V1FQ16864 119 aa7.2□□□□□ -1.26
USE1-203ENST00000593597 MUC21Q5SSG8 566 aa7.2□□□□□ -1.26
USE1-203ENST00000593597 TMEM78Q5T7P6 136 aa7.2□□□□□ -1.26
USE1-203ENST00000593597 Q5VSD8 79 aa7.2□□□□□ -1.26
USE1-203ENST00000593597 STX12Q86Y82 276 aa7.2□□□□□ -1.26
USE1-203ENST00000593597 HHLA3Q9XRX5 114 aa7.2□□□□□ -1.26
USE1-203ENST00000593597 LOC100131303A0A0U1RQF7 123 aa7.19□□□□□ -1.26
USE1-203ENST00000593597 PVALBP20472 110 aaPredicted RBP7.19□□□□□ -1.26
USE1-203ENST00000593597 ZNF138P52744 262 aa7.19□□□□□ -1.26
USE1-203ENST00000593597 HBG1P69891 147 aa7.19□□□□□ -1.26
USE1-203ENST00000593597 HBG2P69892 147 aa7.19□□□□□ -1.26
USE1-203ENST00000593597 ZNF415Q09FC8 603 aa7.19□□□□□ -1.26
USE1-203ENST00000593597 ZNF266Q14584 549 aa7.19□□□□□ -1.26
USE1-203ENST00000593597 CDPF1Q6NVV7 123 aa7.19□□□□□ -1.26
USE1-203ENST00000593597 OR5C1Q8NGR4 320 aa7.19□□□□□ -1.26
USE1-203ENST00000593597 OR51M1Q9H341 326 aa7.19□□□□□ -1.26
USE1-203ENST00000593597 AAMDCQ9H7C9 122 aa7.19□□□□□ -1.26
USE1-203ENST00000593597 PGPEP1Q9NXJ5 209 aa7.19□□□□□ -1.26
USE1-203ENST00000593597 E5RGE8 158 aa7.18□□□□□ -1.26
USE1-203ENST00000593597 INAFM2P0DMQ5 153 aa7.18□□□□□ -1.26
USE1-203ENST00000593597 MRPL23Q16540 153 aaKnown RBP7.18□□□□□ -1.26
USE1-203ENST00000593597 Q6AWC8 147 aa7.18□□□□□ -1.26
USE1-203ENST00000593597 NEGR1Q7Z3B1 354 aa7.18□□□□□ -1.26
USE1-203ENST00000593597 IQCF2Q8IXL9 164 aa7.18□□□□□ -1.26
USE1-203ENST00000593597 OR10G4Q8NGN3 311 aa7.18□□□□□ -1.26
USE1-203ENST00000593597 ARPC5LQ9BPX5 153 aa7.18□□□□□ -1.26
USE1-203ENST00000593597 PAXXQ9BUH6 204 aa7.18□□□□□ -1.26
USE1-203ENST00000593597 MRPL32Q9BYC8 188 aaKnown RBP7.18□□□□□ -1.26
USE1-203ENST00000593597 WDR61Q9GZS3 305 aaKnown RBP7.18□□□□□ -1.26
USE1-203ENST00000593597 LRP1Q07954 4544 aaKnown RBP7.18□□□□□ -1.26
USE1-203ENST00000593597 TRBV7-9A0A0J9YWB2 115 aa7.17□□□□□ -1.26
USE1-203ENST00000593597 SMR3BP02814 79 aaPredicted RBP7.17□□□□□ -1.26
USE1-203ENST00000593597 GYPEP15421 78 aa7.17□□□□□ -1.26
USE1-203ENST00000593597 TMEM183BQ1AE95 376 aa7.17□□□□□ -1.26
USE1-203ENST00000593597 TMEM183AQ8IXX5 376 aa7.17□□□□□ -1.26
USE1-203ENST00000593597 RASL10AQ92737 203 aa7.17□□□□□ -1.26
USE1-203ENST00000593597 MSRB1Q9NZV6 116 aa7.17□□□□□ -1.26
USE1-203ENST00000593597 LY96Q9Y6Y9 160 aa7.17□□□□□ -1.26
USE1-203ENST00000593597 FAT3Q8TDW7 4589 aa7.17□□□□□ -1.26
USE1-203ENST00000593597 TRGV4A0A0C4DH28 118 aa7.16□□□□□ -1.26
USE1-203ENST00000593597 RBAKDNA6NC62 111 aa7.16□□□□□ -1.26
USE1-203ENST00000593597 LRCOL1A6NCL2 159 aa7.16□□□□□ -1.26
USE1-203ENST00000593597 TVP23CQ96ET8 276 aa7.16□□□□□ -1.26
USE1-203ENST00000593597 DIRC3C9JPN6 131 aa7.15□□□□□ -1.26
USE1-203ENST00000593597 GNRH2O43555 120 aa7.15□□□□□ -1.26
USE1-203ENST00000593597 SRIP30626 198 aa7.15□□□□□ -1.26
USE1-203ENST00000593597 RANP62826 216 aaKnown RBP7.15□□□□□ -1.26
USE1-203ENST00000593597 UBE2L3P68036 154 aaKnown RBP7.15□□□□□ -1.26
USE1-203ENST00000593597 IFITM3Q01628 133 aa7.15□□□□□ -1.26
USE1-203ENST00000593597 SLAQ13239 276 aa7.15□□□□□ -1.26
USE1-203ENST00000593597 LRRC37A5PQ49AS3 106 aa7.15□□□□□ -1.26
USE1-203ENST00000593597 NFE4Q86UQ8 179 aa7.15□□□□□ -1.26
USE1-203ENST00000593597 CCDC32Q9BV29 185 aa7.15□□□□□ -1.26
USE1-203ENST00000593597 HMCN2Q8NDA2 5059 aa7.15□□□□□ -1.27
USE1-203ENST00000593597 TRAV4A0A0B4J268 109 aa7.14□□□□□ -1.27
USE1-203ENST00000593597 IGHV3-16A0A0C4DH30 117 aa7.14□□□□□ -1.27
USE1-203ENST00000593597 FAM240BA0A1B0GVZ2 78 aa7.14□□□□□ -1.27
USE1-203ENST00000593597 F6UZH7 168 aa7.14□□□□□ -1.27
USE1-203ENST00000593597 EREGO14944 169 aa7.14□□□□□ -1.27
USE1-203ENST00000593597 OR7C2O60412 319 aa7.14□□□□□ -1.27
USE1-203ENST00000593597 TYMSP04818 313 aa7.14□□□□□ -1.27
USE1-203ENST00000593597 H2BFSP57053 126 aa7.14□□□□□ -1.27
USE1-203ENST00000593597 ASAH1Q13510 395 aa7.14□□□□□ -1.27
USE1-203ENST00000593597 TDRG1Q3Y452 100 aa7.14□□□□□ -1.27
USE1-203ENST00000593597 PKHD1L1Q86WI1 4243 aa7.13□□□□□ -1.27
USE1-203ENST00000593597 TRAV8-1A0A0A6YYK1 113 aa7.13□□□□□ -1.27
USE1-203ENST00000593597 CRYGDP07320 174 aa7.13□□□□□ -1.27
USE1-203ENST00000593597 GATA1P15976 413 aaPredicted RBP7.13□□□□□ -1.27
USE1-203ENST00000593597 GCSHP23434 173 aa7.13□□□□□ -1.27
USE1-203ENST00000593597 WFDC2Q14508 124 aa7.13□□□□□ -1.27
USE1-203ENST00000593597 FFAR4Q5NUL3 377 aa7.13□□□□□ -1.27
USE1-203ENST00000593597 DPPA3Q6W0C5 159 aa7.13□□□□□ -1.27
USE1-203ENST00000593597 ATP5SQ99766 215 aa7.13□□□□□ -1.27
USE1-203ENST00000593597 SPXQ9BT56 116 aa7.13□□□□□ -1.27
USE1-203ENST00000593597 NMES1Q9C002 83 aa7.13□□□□□ -1.27
USE1-203ENST00000593597 SLC25A31Q9H0C2 315 aa7.13□□□□□ -1.27
USE1-203ENST00000593597 WFDC1Q9HC57 220 aa7.13□□□□□ -1.27
USE1-203ENST00000593597 FAM30AQ9NZY2 134 aa7.13□□□□□ -1.27
USE1-203ENST00000593597 C11orf21Q9P2W6 132 aa7.13□□□□□ -1.27
USE1-203ENST00000593597 NAGKQ9UJ70 344 aa7.13□□□□□ -1.27
USE1-203ENST00000593597 LENEPQ9Y5L5 61 aa7.13□□□□□ -1.27
USE1-203ENST00000593597 TRGV11A0A075B6L2 103 aa7.12□□□□□ -1.27
USE1-203ENST00000593597 ORM1P02763 201 aa7.12□□□□□ -1.27
USE1-203ENST00000593597 EVI2AP22794 236 aa7.12□□□□□ -1.27
USE1-203ENST00000593597 GNG5P63218 68 aa7.12□□□□□ -1.27
USE1-203ENST00000593597 FAM159AQ6UWV7 190 aa7.12□□□□□ -1.27
USE1-203ENST00000593597 Q8N3U1 123 aa7.12□□□□□ -1.27
USE1-203ENST00000593597 TMED6Q8WW62 240 aa7.12□□□□□ -1.27
USE1-203ENST00000593597 FRZBQ92765 325 aa7.12□□□□□ -1.27
USE1-203ENST00000593597 RPH3ALQ9UNE2 315 aa7.12□□□□□ -1.27
USE1-203ENST00000593597 HSPB11Q9Y547 144 aa7.12□□□□□ -1.27
USE1-203ENST00000593597 TRAV9-2A0A087WT02 112 aa7.11□□□□□ -1.27
USE1-203ENST00000593597 M0R2P5 195 aa7.11□□□□□ -1.27
USE1-203ENST00000593597 IFNA5P01569 189 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms