RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 ZNF562Q6V9R5 426 aa11.28□□□□□ -0.6
CCDC43-203ENST00000588210 Q6ZSV7 163 aa11.28□□□□□ -0.6
CCDC43-203ENST00000588210 COX8CQ7Z4L0 72 aa11.28□□□□□ -0.6
CCDC43-203ENST00000588210 TTC9CQ8N5M4 171 aa11.28□□□□□ -0.6
CCDC43-203ENST00000588210 ARL6IP6Q8N6S5 226 aa11.28□□□□□ -0.6
CCDC43-203ENST00000588210 AP5S1Q9NUS5 200 aa11.28□□□□□ -0.6
CCDC43-203ENST00000588210 hDV102S1A0JD36 115 aa11.27□□□□□ -0.61
CCDC43-203ENST00000588210 PSG9Q00887 426 aa11.27□□□□□ -0.61
CCDC43-203ENST00000588210 LINC01545Q5VT33 79 aa11.27□□□□□ -0.61
CCDC43-203ENST00000588210 C8orf49Q96NF6 230 aa11.27□□□□□ -0.61
CCDC43-203ENST00000588210 C16orf95Q9H693 158 aa11.27□□□□□ -0.61
CCDC43-203ENST00000588210 COX11Q9Y6N1 276 aa11.27□□□□□ -0.61
CCDC43-203ENST00000588210 S4R3C0 116 aa11.27□□□□□ -0.61
CCDC43-203ENST00000588210 HSBP1L1C9JCN9 74 aa11.26□□□□□ -0.61
CCDC43-203ENST00000588210 CSN1S1P47710 185 aa11.26□□□□□ -0.61
CCDC43-203ENST00000588210 NDPQ00604 133 aa11.26□□□□□ -0.61
CCDC43-203ENST00000588210 UNQ5815/PRO19632Q6UWF5 114 aa11.26□□□□□ -0.61
CCDC43-203ENST00000588210 Q8N6K4 173 aa11.26□□□□□ -0.61
CCDC43-203ENST00000588210 C21orf62Q9NYP8 219 aa11.26□□□□□ -0.61
CCDC43-203ENST00000588210 FBLL1A6NHQ2 334 aaKnown RBP11.26□□□□□ -0.61
CCDC43-203ENST00000588210 CSN3P07498 182 aa11.26□□□□□ -0.61
CCDC43-203ENST00000588210 SPATA3Q8NHX4 192 aa11.26□□□□□ -0.61
CCDC43-203ENST00000588210 MS4A6AQ9H2W1 248 aa11.26□□□□□ -0.61
CCDC43-203ENST00000588210 SCRT2Q9NQ03 307 aa11.26□□□□□ -0.61
CCDC43-203ENST00000588210 MOB4Q9Y3A3 225 aa11.26□□□□□ -0.61
CCDC43-203ENST00000588210 COL6A5A8TX70 2615 aa11.25□□□□□ -0.61
CCDC43-203ENST00000588210 CLPSL1A2RUU4 121 aa11.25□□□□□ -0.61
CCDC43-203ENST00000588210 SH2D1AO60880 128 aa11.25□□□□□ -0.61
CCDC43-203ENST00000588210 RPL7P18124 248 aaKnown RBP11.25□□□□□ -0.61
CCDC43-203ENST00000588210 SLC25A34Q6PIV7 304 aa11.25□□□□□ -0.61
CCDC43-203ENST00000588210 FA2HQ7L5A8 372 aa11.25□□□□□ -0.61
CCDC43-203ENST00000588210 ZNF738Q8NE65 137 aa11.25□□□□□ -0.61
CCDC43-203ENST00000588210 LINC01006Q8NI28 216 aa11.25□□□□□ -0.61
CCDC43-203ENST00000588210 THYN1Q9P016 225 aa11.25□□□□□ -0.61
CCDC43-203ENST00000588210 U3KQK5 164 aa11.25□□□□□ -0.61
CCDC43-203ENST00000588210 TMEM189A5PLL7 270 aa11.24□□□□□ -0.61
CCDC43-203ENST00000588210 C12orf54Q6X4T0 127 aa11.24□□□□□ -0.61
CCDC43-203ENST00000588210 OR10AG1Q8NH19 301 aa11.24□□□□□ -0.61
CCDC43-203ENST00000588210 SCGB2A1O75556 95 aa11.24□□□□□ -0.61
CCDC43-203ENST00000588210 BLCAPP62952 87 aa11.24□□□□□ -0.61
CCDC43-203ENST00000588210 SAPCD1Q5SSQ6 148 aa11.24□□□□□ -0.61
CCDC43-203ENST00000588210 Q8N2B8 174 aa11.24□□□□□ -0.61
CCDC43-203ENST00000588210 ZNF747Q9BV97 191 aa11.24□□□□□ -0.61
CCDC43-203ENST00000588210 TPPP3Q9BW30 176 aa11.24□□□□□ -0.61
CCDC43-203ENST00000588210 TP73-AS1Q9UF72 201 aa11.24□□□□□ -0.61
CCDC43-203ENST00000588210 LYZL1Q6UWQ5 148 aa11.23□□□□□ -0.61
CCDC43-203ENST00000588210 PRSS3P2Q8NHM4 247 aa11.23□□□□□ -0.61
CCDC43-203ENST00000588210 ZNF702PQ9H963 129 aa11.23□□□□□ -0.61
CCDC43-203ENST00000588210 NCBP2LA6PVI3 153 aaKnown RBP11.23□□□□□ -0.61
CCDC43-203ENST00000588210 PRB4P10163 310 aaPredicted RBP11.23□□□□□ -0.61
CCDC43-203ENST00000588210 FAM104BQ5XKR9 115 aa11.23□□□□□ -0.61
CCDC43-203ENST00000588210 C5orf56Q8N8D9 126 aa11.23□□□□□ -0.61
CCDC43-203ENST00000588210 IGKV2-40A0A087WW87 121 aaPredicted RBP11.22□□□□□ -0.61
CCDC43-203ENST00000588210 IGKV2D-40P01614 121 aaPredicted RBP11.22□□□□□ -0.61
CCDC43-203ENST00000588210 RPS20P60866 119 aaKnown RBP11.22□□□□□ -0.61
CCDC43-203ENST00000588210 PRR25Q96S07 402 aa11.22□□□□□ -0.61
CCDC43-203ENST00000588210 RABAC1Q9UI14 185 aa11.22□□□□□ -0.61
CCDC43-203ENST00000588210 D6R8Y8 96 aa11.21□□□□□ -0.61
CCDC43-203ENST00000588210 CCL25O15444 150 aa11.21□□□□□ -0.61
CCDC43-203ENST00000588210 UBE2V1Q13404 147 aa11.21□□□□□ -0.61
CCDC43-203ENST00000588210 MPV17L2Q567V2 206 aa11.21□□□□□ -0.61
CCDC43-203ENST00000588210 Q6ZVH6 145 aa11.21□□□□□ -0.61
CCDC43-203ENST00000588210 Q8N9W7 124 aa11.21□□□□□ -0.61
CCDC43-203ENST00000588210 A0A096LNJ9 63 aa11.21□□□□□ -0.62
CCDC43-203ENST00000588210 TMEM213A2RRL7 107 aa11.21□□□□□ -0.62
CCDC43-203ENST00000588210 CTSGP08311 255 aa11.21□□□□□ -0.62
CCDC43-203ENST00000588210 S100A7P31151 101 aa11.21□□□□□ -0.62
CCDC43-203ENST00000588210 IFI27P40305 119 aaPredicted RBP11.21□□□□□ -0.62
CCDC43-203ENST00000588210 PTTG1IPP53801 180 aa11.21□□□□□ -0.62
CCDC43-203ENST00000588210 RELQ04864 619 aaPredicted RBP11.21□□□□□ -0.62
CCDC43-203ENST00000588210 BVES-AS1Q5T3Y7 98 aa11.21□□□□□ -0.62
CCDC43-203ENST00000588210 ORMDL3Q8N138 153 aa11.21□□□□□ -0.62
CCDC43-203ENST00000588210 C3orf56Q8N813 242 aa11.21□□□□□ -0.62
CCDC43-203ENST00000588210 PRELID3AQ96N28 172 aa11.21□□□□□ -0.62
CCDC43-203ENST00000588210 SIGLEC8Q9NYZ4 499 aa11.21□□□□□ -0.62
CCDC43-203ENST00000588210 TMSB15BA0A087X1C1 80 aa11.2□□□□□ -0.62
CCDC43-203ENST00000588210 OR2T8A6NH00 312 aa11.2□□□□□ -0.62
CCDC43-203ENST00000588210 H0Y8G0 127 aa11.2□□□□□ -0.62
CCDC43-203ENST00000588210 EGR2P11161 476 aaPredicted RBP11.2□□□□□ -0.62
CCDC43-203ENST00000588210 PROK1P58294 105 aa11.2□□□□□ -0.62
CCDC43-203ENST00000588210 Q6ZS46 218 aa11.2□□□□□ -0.62
CCDC43-203ENST00000588210 AMN1Q8IY45 258 aa11.2□□□□□ -0.62
CCDC43-203ENST00000588210 MCRIP2Q9BUT9 160 aaKnown RBP11.2□□□□□ -0.62
CCDC43-203ENST00000588210 SMAD5-AS1Q9Y6J3 95 aa11.2□□□□□ -0.62
CCDC43-203ENST00000588210 IGHV7-81A0A0B4J1V7 117 aa11.2□□□□□ -0.62
CCDC43-203ENST00000588210 IGHV3-23P01764 117 aa11.2□□□□□ -0.62
CCDC43-203ENST00000588210 HIST1H1AQ02539 215 aaPredicted RBP11.2□□□□□ -0.62
CCDC43-203ENST00000588210 DPF1Q92782 380 aa11.2□□□□□ -0.62
CCDC43-203ENST00000588210 PMCHL2Q9BQD1 86 aa11.2□□□□□ -0.62
CCDC43-203ENST00000588210 TIMM8BQ9Y5J9 83 aaPredicted RBP11.2□□□□□ -0.62
CCDC43-203ENST00000588210 NUDT3O95989 172 aa11.19□□□□□ -0.62
CCDC43-203ENST00000588210 IGLC6P0CF74 106 aa11.19□□□□□ -0.62
CCDC43-203ENST00000588210 COX8AP10176 69 aa11.19□□□□□ -0.62
CCDC43-203ENST00000588210 BMI1P35226 326 aa11.19□□□□□ -0.62
CCDC43-203ENST00000588210 MRPL51Q4U2R6 128 aaKnown RBP11.19□□□□□ -0.62
CCDC43-203ENST00000588210 DNHD1Q96M86 4753 aa11.19□□□□□ -0.62
CCDC43-203ENST00000588210 NCR2O95944 276 aa11.18□□□□□ -0.62
CCDC43-203ENST00000588210 IGHG4P01861 327 aa11.18□□□□□ -0.62
CCDC43-203ENST00000588210 KLK9Q2XQG4 91 aa11.18□□□□□ -0.62
CCDC43-203ENST00000588210 FAM106AQ4KMX7 169 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms