RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 ICOSQ9Y6W8 199 aa6.1□□□□□ -1.43
GGA3-207ENST00000578896 DMBT1Q9UGM3 2413 aaPredicted RBP6.09□□□□□ -1.43
GGA3-207ENST00000578896 DNAH10OSP0CZ25 163 aa6.09□□□□□ -1.43
GGA3-207ENST00000578896 ZNF138P52744 262 aa6.09□□□□□ -1.43
GGA3-207ENST00000578896 CRYBA4P53673 196 aa6.09□□□□□ -1.43
GGA3-207ENST00000578896 RANP62826 216 aaKnown RBP6.09□□□□□ -1.43
GGA3-207ENST00000578896 LYPD5Q6UWN5 251 aa6.09□□□□□ -1.43
GGA3-207ENST00000578896 ZNF479Q96JC4 524 aa6.09□□□□□ -1.43
GGA3-207ENST00000578896 C18orf15Q96N68 181 aa6.09□□□□□ -1.43
GGA3-207ENST00000578896 PRO0255Q9UI72 69 aa6.09□□□□□ -1.43
GGA3-207ENST00000578896 HHLA3Q9XRX5 114 aa6.09□□□□□ -1.43
GGA3-207ENST00000578896 MYCBP2O75592 4640 aa6.08□□□□□ -1.44
GGA3-207ENST00000578896 OR7C2O60412 319 aa6.08□□□□□ -1.44
GGA3-207ENST00000578896 TMEM183BQ1AE95 376 aa6.08□□□□□ -1.44
GGA3-207ENST00000578896 IBA57Q5T440 356 aaKnown RBP6.08□□□□□ -1.44
GGA3-207ENST00000578896 WFDC10BQ8IUB3 73 aa6.08□□□□□ -1.44
GGA3-207ENST00000578896 TMEM183AQ8IXX5 376 aa6.08□□□□□ -1.44
GGA3-207ENST00000578896 CCDC32Q9BV29 185 aa6.08□□□□□ -1.44
GGA3-207ENST00000578896 SMIM3Q9BZL3 60 aa6.08□□□□□ -1.44
GGA3-207ENST00000578896 WDR61Q9GZS3 305 aaKnown RBP6.08□□□□□ -1.44
GGA3-207ENST00000578896 RPH3ALQ9UNE2 315 aa6.08□□□□□ -1.44
GGA3-207ENST00000578896 TRGV4A0A0C4DH28 118 aa6.07□□□□□ -1.44
GGA3-207ENST00000578896 LOC100131303A0A0U1RQF7 123 aa6.07□□□□□ -1.44
GGA3-207ENST00000578896 GNRH2O43555 120 aa6.07□□□□□ -1.44
GGA3-207ENST00000578896 NMBP08949 121 aa6.07□□□□□ -1.44
GGA3-207ENST00000578896 KRTAP10-1P60331 282 aa6.07□□□□□ -1.44
GGA3-207ENST00000578896 IFITM3Q01628 133 aa6.07□□□□□ -1.44
GGA3-207ENST00000578896 ZNF415Q09FC8 603 aa6.07□□□□□ -1.44
GGA3-207ENST00000578896 ASAH1Q13510 395 aa6.07□□□□□ -1.44
GGA3-207ENST00000578896 FFAR4Q5NUL3 377 aa6.07□□□□□ -1.44
GGA3-207ENST00000578896 MZT2BQ6NZ67 158 aa6.07□□□□□ -1.44
GGA3-207ENST00000578896 HYLS1Q96M11 299 aa6.07□□□□□ -1.44
GGA3-207ENST00000578896 SLC25A31Q9H0C2 315 aa6.07□□□□□ -1.44
GGA3-207ENST00000578896 NAGKQ9UJ70 344 aa6.07□□□□□ -1.44
GGA3-207ENST00000578896 IGHV3-16A0A0C4DH30 117 aa6.06□□□□□ -1.44
GGA3-207ENST00000578896 DIRC3C9JPN6 131 aa6.06□□□□□ -1.44
GGA3-207ENST00000578896 K7EQD1 137 aa6.06□□□□□ -1.44
GGA3-207ENST00000578896 GYPEP15421 78 aa6.06□□□□□ -1.44
GGA3-207ENST00000578896 CSN1S1P47710 185 aa6.06□□□□□ -1.44
GGA3-207ENST00000578896 XGP55808 180 aa6.06□□□□□ -1.44
GGA3-207ENST00000578896 ERVFC1-1P60608 527 aa6.06□□□□□ -1.44
GGA3-207ENST00000578896 UBE2L3P68036 154 aaKnown RBP6.06□□□□□ -1.44
GGA3-207ENST00000578896 HAMPP81172 84 aa6.06□□□□□ -1.44
GGA3-207ENST00000578896 ZNF266Q14584 549 aa6.06□□□□□ -1.44
GGA3-207ENST00000578896 MRPL23Q16540 153 aaKnown RBP6.06□□□□□ -1.44
GGA3-207ENST00000578896 NEGR1Q7Z3B1 354 aa6.06□□□□□ -1.44
GGA3-207ENST00000578896 ENKURQ8TC29 256 aa6.06□□□□□ -1.44
GGA3-207ENST00000578896 MRPL32Q9BYC8 188 aaKnown RBP6.06□□□□□ -1.44
GGA3-207ENST00000578896 A0A087WTM6 91 aa6.05□□□□□ -1.44
GGA3-207ENST00000578896 EPM2AB3EWF7 344 aa6.05□□□□□ -1.44
GGA3-207ENST00000578896 F6UZH7 168 aa6.05□□□□□ -1.44
GGA3-207ENST00000578896 HMGB3O15347 200 aaKnown RBP6.05□□□□□ -1.44
GGA3-207ENST00000578896 SRIP30626 198 aa6.05□□□□□ -1.44
GGA3-207ENST00000578896 H2BFSP57053 126 aa6.05□□□□□ -1.44
GGA3-207ENST00000578896 PPP1R1CQ8WVI7 109 aa6.05□□□□□ -1.44
GGA3-207ENST00000578896 SGK494Q96LW2 274 aa6.05□□□□□ -1.44
GGA3-207ENST00000578896 ATP5SQ99766 215 aa6.05□□□□□ -1.44
GGA3-207ENST00000578896 NMES1Q9C002 83 aa6.05□□□□□ -1.44
GGA3-207ENST00000578896 WFDC1Q9HC57 220 aa6.05□□□□□ -1.44
GGA3-207ENST00000578896 PGPEP1Q9NXJ5 209 aa6.05□□□□□ -1.44
GGA3-207ENST00000578896 NDUFA13Q9P0J0 144 aa6.05□□□□□ -1.44
GGA3-207ENST00000578896 LY96Q9Y6Y9 160 aa6.05□□□□□ -1.44
GGA3-207ENST00000578896 SRRM2Q9UQ35 2752 aaKnown RBP6.04□□□□□ -1.44
GGA3-207ENST00000578896 TRAV8-1A0A0A6YYK1 113 aa6.04□□□□□ -1.44
GGA3-207ENST00000578896 PGPA6NDG6 321 aa6.04□□□□□ -1.44
GGA3-207ENST00000578896 C17orf112F2Z3M2 114 aa6.04□□□□□ -1.44
GGA3-207ENST00000578896 INMT-MINDY4F8WBC2 141 aa6.04□□□□□ -1.44
GGA3-207ENST00000578896 EREGO14944 169 aa6.04□□□□□ -1.44
GGA3-207ENST00000578896 SMR3BP02814 79 aaPredicted RBP6.04□□□□□ -1.44
GGA3-207ENST00000578896 GNG5P63218 68 aa6.04□□□□□ -1.44
GGA3-207ENST00000578896 SLAQ13239 276 aa6.04□□□□□ -1.44
GGA3-207ENST00000578896 Q6AWC8 147 aa6.04□□□□□ -1.44
GGA3-207ENST00000578896 FAM159AQ6UWV7 190 aa6.04□□□□□ -1.44
GGA3-207ENST00000578896 GOLT1AQ6ZVE7 132 aa6.04□□□□□ -1.44
GGA3-207ENST00000578896 LYPD1Q8N2G4 141 aa6.04□□□□□ -1.44
GGA3-207ENST00000578896 OR10G4Q8NGN3 311 aa6.04□□□□□ -1.44
GGA3-207ENST00000578896 RASL10AQ92737 203 aa6.04□□□□□ -1.44
GGA3-207ENST00000578896 TVP23CQ96ET8 276 aa6.04□□□□□ -1.44
GGA3-207ENST00000578896 MSRB1Q9NZV6 116 aa6.04□□□□□ -1.44
GGA3-207ENST00000578896 HSPB11Q9Y547 144 aa6.04□□□□□ -1.44
GGA3-207ENST00000578896 TRBV7-9A0A0J9YWB2 115 aa6.03□□□□□ -1.44
GGA3-207ENST00000578896 RBAKDNA6NC62 111 aa6.03□□□□□ -1.44
GGA3-207ENST00000578896 UPK1BO75841 260 aa6.03□□□□□ -1.44
GGA3-207ENST00000578896 MPC2O95563 127 aa6.03□□□□□ -1.44
GGA3-207ENST00000578896 INAFM2P0DMQ5 153 aa6.03□□□□□ -1.44
GGA3-207ENST00000578896 RAB2AP61019 212 aa6.03□□□□□ -1.44
GGA3-207ENST00000578896 OR4C5Q8NGB2 326 aa6.03□□□□□ -1.44
GGA3-207ENST00000578896 SCGB1C1Q8TD33 95 aa6.03□□□□□ -1.44
GGA3-207ENST00000578896 PCNPQ8WW12 178 aaKnown RBP6.03□□□□□ -1.44
GGA3-207ENST00000578896 SPXQ9BT56 116 aa6.03□□□□□ -1.44
GGA3-207ENST00000578896 KCNIP2Q9NS61 270 aa6.03□□□□□ -1.44
GGA3-207ENST00000578896 MBD2Q9UBB5 411 aa6.03□□□□□ -1.44
GGA3-207ENST00000578896 TRGV11A0A075B6L2 103 aa6.02□□□□□ -1.45
GGA3-207ENST00000578896 TRAV9-2A0A087WT02 112 aa6.02□□□□□ -1.45
GGA3-207ENST00000578896 IGHV3-73A0A0B4J1V6 119 aa6.02□□□□□ -1.45
GGA3-207ENST00000578896 TRAV4A0A0B4J268 109 aa6.02□□□□□ -1.45
GGA3-207ENST00000578896 C9JCJ5 164 aa6.02□□□□□ -1.45
GGA3-207ENST00000578896 M0R2P5 195 aa6.02□□□□□ -1.45
GGA3-207ENST00000578896 SSNA1O43805 119 aa6.02□□□□□ -1.45
GGA3-207ENST00000578896 IFNA5P01569 189 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms