RNA–Protein interactions for RNA: ENST00000577906.1

SNRPD1-202, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 2

Gene SNRPD1, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-202ENST00000577906 A2MP01023 1474 aa0.61□□□□□ -2.31
SNRPD1-202ENST00000577906 ARL5CA6NH57 179 aa0.6□□□□□ -2.31
SNRPD1-202ENST00000577906 BBIP1A8MTZ0 92 aa0.6□□□□□ -2.31
SNRPD1-202ENST00000577906 H0YJX3 145 aa0.6□□□□□ -2.31
SNRPD1-202ENST00000577906 GYPBP06028 91 aa0.6□□□□□ -2.31
SNRPD1-202ENST00000577906 CCL4P13236 92 aa0.6□□□□□ -2.31
SNRPD1-202ENST00000577906 DNAJB13P59910 316 aa0.6□□□□□ -2.31
SNRPD1-202ENST00000577906 B2MP61769 119 aa0.6□□□□□ -2.31
SNRPD1-202ENST00000577906 AP1S3Q96PC3 154 aa0.6□□□□□ -2.31
SNRPD1-202ENST00000577906 NUP210Q8TEM1 1887 aaPredicted RBP0.6□□□□□ -2.31
SNRPD1-202ENST00000577906 ASH1LQ9NR48 2969 aaKnown RBP0.59□□□□□ -2.31
SNRPD1-202ENST00000577906 HBDP02042 147 aa0.59□□□□□ -2.31
SNRPD1-202ENST00000577906 SPINT3P49223 89 aa0.59□□□□□ -2.31
SNRPD1-202ENST00000577906 SNRPD3P62318 126 aaKnown RBP0.59□□□□□ -2.31
SNRPD1-202ENST00000577906 CCSMST1Q4G0I0 132 aa0.59□□□□□ -2.31
SNRPD1-202ENST00000577906 OR5A2Q8NGI9 324 aa0.59□□□□□ -2.31
SNRPD1-202ENST00000577906 DSPPQ9NZW4 1301 aa0.59□□□□□ -2.32
SNRPD1-202ENST00000577906 PTPRDP23468 1912 aa0.58□□□□□ -2.32
SNRPD1-202ENST00000577906 MACF1Q9UPN3 7388 aaKnown RBP0.58□□□□□ -2.32
SNRPD1-202ENST00000577906 SPTBP11277 2137 aa0.58□□□□□ -2.32
SNRPD1-202ENST00000577906 ZFC3H1O60293 1989 aaKnown RBP0.58□□□□□ -2.32
SNRPD1-202ENST00000577906 NBEAP1P0C6P0 100 aa0.58□□□□□ -2.32
SNRPD1-202ENST00000577906 GTF2A1P52655 376 aaPredicted RBP0.58□□□□□ -2.32
SNRPD1-202ENST00000577906 ZNF137PP52743 207 aa0.58□□□□□ -2.32
SNRPD1-202ENST00000577906 RPS28P62857 69 aaKnown RBP0.58□□□□□ -2.32
SNRPD1-202ENST00000577906 C3orf62Q6ZUJ4 267 aa0.58□□□□□ -2.32
SNRPD1-202ENST00000577906 C19orf12Q9NSK7 152 aa0.58□□□□□ -2.32
SNRPD1-202ENST00000577906 COMMD3Q9UBI1 195 aa0.58□□□□□ -2.32
SNRPD1-202ENST00000577906 ANKRD31Q8N7Z5 1873 aa0.58□□□□□ -2.32
SNRPD1-202ENST00000577906 IFITM5A6NNB3 132 aa0.57□□□□□ -2.32
SNRPD1-202ENST00000577906 TSTD3H0UI37 97 aa0.57□□□□□ -2.32
SNRPD1-202ENST00000577906 UQCRQO14949 82 aa0.57□□□□□ -2.32
SNRPD1-202ENST00000577906 EDF1O60869 148 aaKnown RBP0.57□□□□□ -2.32
SNRPD1-202ENST00000577906 SLC25A5P05141 298 aaKnown RBP0.57□□□□□ -2.32
SNRPD1-202ENST00000577906 ETV6P41212 452 aa0.57□□□□□ -2.32
SNRPD1-202ENST00000577906 CAV3P56539 151 aa0.57□□□□□ -2.32
SNRPD1-202ENST00000577906 C6orf52Q5T4I8 152 aa0.57□□□□□ -2.32
SNRPD1-202ENST00000577906 XAF1Q6GPH4 301 aa0.57□□□□□ -2.32
SNRPD1-202ENST00000577906 Q6ZS92 163 aa0.57□□□□□ -2.32
SNRPD1-202ENST00000577906 SKA2Q8WVK7 121 aaPredicted RBP0.57□□□□□ -2.32
SNRPD1-202ENST00000577906 TANC2Q9HCD6 1990 aa0.57□□□□□ -2.32
SNRPD1-202ENST00000577906 GNG14A0A1W2PPG7 69 aa0.56□□□□□ -2.32
SNRPD1-202ENST00000577906 TMEM189A5PLL7 270 aa0.56□□□□□ -2.32
SNRPD1-202ENST00000577906 CDC42EP2O14613 210 aa0.56□□□□□ -2.32
SNRPD1-202ENST00000577906 LSM3P62310 102 aaKnown RBP0.56□□□□□ -2.32
SNRPD1-202ENST00000577906 LINC00208Q96KT6 92 aa0.56□□□□□ -2.32
SNRPD1-202ENST00000577906 SMIM7Q9BQ49 75 aa0.56□□□□□ -2.32
SNRPD1-202ENST00000577906 MRPL40Q9NQ50 206 aaKnown RBP0.56□□□□□ -2.32
SNRPD1-202ENST00000577906 MRPL36Q9P0J6 103 aaKnown RBP0.56□□□□□ -2.32
SNRPD1-202ENST00000577906 GINS2Q9Y248 185 aa0.56□□□□□ -2.32
SNRPD1-202ENST00000577906 PHGR1C9JFL3 82 aa0.55□□□□□ -2.32
SNRPD1-202ENST00000577906 TCRAP04437 139 aa0.55□□□□□ -2.32
SNRPD1-202ENST00000577906 CKS2P33552 79 aa0.55□□□□□ -2.32
SNRPD1-202ENST00000577906 Q5XG85 94 aa0.55□□□□□ -2.32
SNRPD1-202ENST00000577906 C10orf99Q6UWK7 81 aa0.55□□□□□ -2.32
SNRPD1-202ENST00000577906 LYPD5Q6UWN5 251 aa0.55□□□□□ -2.32
SNRPD1-202ENST00000577906 DEFB132Q7Z7B7 95 aa0.55□□□□□ -2.32
SNRPD1-202ENST00000577906 OTOSQ8NHW6 89 aa0.55□□□□□ -2.32
SNRPD1-202ENST00000577906 HSPB11Q9Y547 144 aa0.55□□□□□ -2.32
SNRPD1-202ENST00000577906 CTTNBP2Q8WZ74 1663 aa0.55□□□□□ -2.32
SNRPD1-202ENST00000577906 FRAS1Q86XX4 4008 aa0.55□□□□□ -2.32
SNRPD1-202ENST00000577906 MED23Q9ULK4 1368 aa0.55□□□□□ -2.32
SNRPD1-202ENST00000577906 MUC5ACP98088 5654 aa0.55□□□□□ -2.32
SNRPD1-202ENST00000577906 USP54Q70EL1 1684 aa0.54□□□□□ -2.32
SNRPD1-202ENST00000577906 NBDYA0A0U1RRE5 68 aa0.54□□□□□ -2.32
SNRPD1-202ENST00000577906 TMEM30CPA0ZSE6 113 aa0.54□□□□□ -2.32
SNRPD1-202ENST00000577906 J3KT08 172 aa0.54□□□□□ -2.32
SNRPD1-202ENST00000577906 IGF2P01344 180 aa0.54□□□□□ -2.32
SNRPD1-202ENST00000577906 IGKCP01834 107 aa0.54□□□□□ -2.32
SNRPD1-202ENST00000577906 RHOHQ15669 191 aa0.54□□□□□ -2.32
SNRPD1-202ENST00000577906 GLYATL3Q5SZD4 288 aa0.54□□□□□ -2.32
SNRPD1-202ENST00000577906 OR8J3Q8NGG0 315 aa0.54□□□□□ -2.32
SNRPD1-202ENST00000577906 MRPL35Q9NZE8 188 aaKnown RBP0.54□□□□□ -2.32
SNRPD1-202ENST00000577906 JPT1Q9UK76 154 aa0.54□□□□□ -2.32
SNRPD1-202ENST00000577906 KNTC1P50748 2209 aa0.53□□□□□ -2.32
SNRPD1-202ENST00000577906 IGHV1-24A0A0C4DH33 117 aa0.53□□□□□ -2.32
SNRPD1-202ENST00000577906 LOC101927531A0A1B0GV80 90 aa0.53□□□□□ -2.32
SNRPD1-202ENST00000577906 PRH1P02810 166 aa0.53□□□□□ -2.32
SNRPD1-202ENST00000577906 EVI2AP22794 236 aa0.53□□□□□ -2.32
SNRPD1-202ENST00000577906 SDC4P31431 198 aa0.53□□□□□ -2.32
SNRPD1-202ENST00000577906 FXYD6P3P58550 94 aa0.53□□□□□ -2.32
SNRPD1-202ENST00000577906 FXYD3Q14802 87 aa0.53□□□□□ -2.32
SNRPD1-202ENST00000577906 KRTAP21-1Q3LI58 79 aa0.53□□□□□ -2.32
SNRPD1-202ENST00000577906 ASB16-AS1Q495Z4 193 aa0.53□□□□□ -2.32
SNRPD1-202ENST00000577906 TAC4Q86UU9 113 aa0.53□□□□□ -2.32
SNRPD1-202ENST00000577906 FAM103A1Q9BTL3 118 aaKnown RBP0.53□□□□□ -2.32
SNRPD1-202ENST00000577906 APCP25054 2843 aa0.53□□□□□ -2.32
SNRPD1-202ENST00000577906 SYNE2Q8WXH0 6885 aaKnown RBP0.52□□□□□ -2.33
SNRPD1-202ENST00000577906 HIGD1CA8MV81 97 aa0.52□□□□□ -2.33
SNRPD1-202ENST00000577906 TPST1O60507 370 aa0.52□□□□□ -2.33
SNRPD1-202ENST00000577906 LY6G6CO95867 125 aa0.52□□□□□ -2.33
SNRPD1-202ENST00000577906 MT-ND4LP03901 98 aa0.52□□□□□ -2.33
SNRPD1-202ENST00000577906 IL7P13232 177 aa0.52□□□□□ -2.33
SNRPD1-202ENST00000577906 SPINK7P58062 85 aa0.52□□□□□ -2.33
SNRPD1-202ENST00000577906 ZNF56Q15929 161 aa0.52□□□□□ -2.33
SNRPD1-202ENST00000577906 IDO2Q6ZQW0 420 aa0.52□□□□□ -2.33
SNRPD1-202ENST00000577906 OR8I2Q8N0Y5 310 aa0.52□□□□□ -2.33
SNRPD1-202ENST00000577906 USP24Q9UPU5 2620 aa0.52□□□□□ -2.33
SNRPD1-202ENST00000577906 OVOS2A0A0G2JMS6 1433 aa0.52□□□□□ -2.33
SNRPD1-202ENST00000577906 FER1L6Q2WGJ9 1857 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms