RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 PIEZO1Q92508 2521 aa8.24□□□□□ -1.09
CHRNB1-205ENST00000573209 TET2Q6N021 2002 aaPredicted RBP8.24□□□□□ -1.09
CHRNB1-205ENST00000573209 CEMP1Q6PRD7 247 aaPredicted RBP8.24□□□□□ -1.09
CHRNB1-205ENST00000573209 MIR17HGQ75NE6 70 aa8.24□□□□□ -1.09
CHRNB1-205ENST00000573209 MAPKAPK5-AS1Q8N8E1 139 aa8.24□□□□□ -1.09
CHRNB1-205ENST00000573209 PRSS22Q9GZN4 317 aa8.24□□□□□ -1.09
CHRNB1-205ENST00000573209 CXXC4Q9H2H0 198 aa8.24□□□□□ -1.09
CHRNB1-205ENST00000573209 MED13Q9UHV7 2174 aa8.24□□□□□ -1.09
CHRNB1-205ENST00000573209 LOXL1Q08397 574 aaPredicted RBP8.24□□□□□ -1.09
CHRNB1-205ENST00000573209 APRG1Q8IVJ8 170 aa8.24□□□□□ -1.09
CHRNB1-205ENST00000573209 NABP2Q9BQ15 211 aa8.24□□□□□ -1.09
CHRNB1-205ENST00000573209 SPTBN2O15020 2390 aa8.23□□□□□ -1.09
CHRNB1-205ENST00000573209 TRGV5A0A0B4J1U4 118 aa8.23□□□□□ -1.09
CHRNB1-205ENST00000573209 TMEM89A2RUT3 159 aa8.23□□□□□ -1.09
CHRNB1-205ENST00000573209 LINC00473A8K010 186 aa8.23□□□□□ -1.09
CHRNB1-205ENST00000573209 PEX7O00628 323 aa8.23□□□□□ -1.09
CHRNB1-205ENST00000573209 SPINT2O43291 252 aa8.23□□□□□ -1.09
CHRNB1-205ENST00000573209 P01737 135 aa8.23□□□□□ -1.09
CHRNB1-205ENST00000573209 MYCNOSP40205 109 aa8.23□□□□□ -1.09
CHRNB1-205ENST00000573209 CXCL5P42830 114 aa8.23□□□□□ -1.09
CHRNB1-205ENST00000573209 PAX8Q06710 450 aa8.23□□□□□ -1.09
CHRNB1-205ENST00000573209 RIGQ13278 110 aa8.23□□□□□ -1.09
CHRNB1-205ENST00000573209 SFTA2Q6UW10 78 aa8.23□□□□□ -1.09
CHRNB1-205ENST00000573209 KLF14Q8TD94 323 aaPredicted RBP8.23□□□□□ -1.09
CHRNB1-205ENST00000573209 SSMEM1Q8WWF3 244 aa8.23□□□□□ -1.09
CHRNB1-205ENST00000573209 SPRR3Q9UBC9 169 aa8.23□□□□□ -1.09
CHRNB1-205ENST00000573209 AMMECR1Q9Y4X0 333 aaPredicted RBP8.23□□□□□ -1.09
CHRNB1-205ENST00000573209 CEP250Q9BV73 2442 aa8.23□□□□□ -1.09
CHRNB1-205ENST00000573209 TMEM178BH3BS89 294 aa8.22□□□□□ -1.09
CHRNB1-205ENST00000573209 ACYP1P07311 99 aa8.22□□□□□ -1.09
CHRNB1-205ENST00000573209 IGHV1-2P23083 117 aa8.22□□□□□ -1.09
CHRNB1-205ENST00000573209 SPTBN4Q9H254 2564 aa8.22□□□□□ -1.09
CHRNB1-205ENST00000573209 KNTC1P50748 2209 aa8.22□□□□□ -1.09
CHRNB1-205ENST00000573209 MRPS12O15235 138 aaKnown RBP8.22□□□□□ -1.09
CHRNB1-205ENST00000573209 PSMB8P28062 276 aa8.22□□□□□ -1.09
CHRNB1-205ENST00000573209 C3orf36Q3SXR2 165 aa8.22□□□□□ -1.09
CHRNB1-205ENST00000573209 ASPHD1Q5U4P2 390 aa8.22□□□□□ -1.09
CHRNB1-205ENST00000573209 TPSG1Q9NRR2 321 aa8.22□□□□□ -1.09
CHRNB1-205ENST00000573209 TEX49A0A1B0GTD5 131 aa8.21□□□□□ -1.09
CHRNB1-205ENST00000573209 SRRM4A7MD48 611 aaKnown RBP8.21□□□□□ -1.09
CHRNB1-205ENST00000573209 WNT9BO14905 357 aa8.21□□□□□ -1.09
CHRNB1-205ENST00000573209 FAM19A1Q7Z5A9 133 aa8.21□□□□□ -1.09
CHRNB1-205ENST00000573209 NDUFA11Q86Y39 141 aa8.21□□□□□ -1.09
CHRNB1-205ENST00000573209 TRGV8A0A0C4DH27 118 aa8.21□□□□□ -1.1
CHRNB1-205ENST00000573209 H7C1H1 209 aa8.21□□□□□ -1.1
CHRNB1-205ENST00000573209 DUTP33316 252 aaKnown RBP8.21□□□□□ -1.1
CHRNB1-205ENST00000573209 UBE2L3P68036 154 aaKnown RBP8.21□□□□□ -1.1
CHRNB1-205ENST00000573209 PRR20EP86478 221 aa8.21□□□□□ -1.1
CHRNB1-205ENST00000573209 PRR20CP86479 221 aa8.21□□□□□ -1.1
CHRNB1-205ENST00000573209 PRR20DP86480 221 aa8.21□□□□□ -1.1
CHRNB1-205ENST00000573209 PRR20BP86481 221 aa8.21□□□□□ -1.1
CHRNB1-205ENST00000573209 PRR20AP86496 221 aa8.21□□□□□ -1.1
CHRNB1-205ENST00000573209 HES3Q5TGS1 186 aa8.21□□□□□ -1.1
CHRNB1-205ENST00000573209 DEFB127Q9H1M4 99 aa8.21□□□□□ -1.1
CHRNB1-205ENST00000573209 DSCAML1Q8TD84 2053 aa8.21□□□□□ -1.1
CHRNB1-205ENST00000573209 PRSS46E5RG02 174 aa8.2□□□□□ -1.1
CHRNB1-205ENST00000573209 IGKV3-15P01624 115 aa8.2□□□□□ -1.1
CHRNB1-205ENST00000573209 ERVK-16P61578 105 aa8.2□□□□□ -1.1
CHRNB1-205ENST00000573209 FOXF2Q12947 444 aa8.2□□□□□ -1.1
CHRNB1-205ENST00000573209 SPINK9Q5DT21 86 aa8.2□□□□□ -1.1
CHRNB1-205ENST00000573209 ZNF826PQ6ZT77 177 aa8.2□□□□□ -1.1
CHRNB1-205ENST00000573209 IL17RELQ6ZVW7 336 aa8.2□□□□□ -1.1
CHRNB1-205ENST00000573209 FAM90A1Q86YD7 464 aa8.2□□□□□ -1.1
CHRNB1-205ENST00000573209 A0A1B0GUT8 65 aa8.2□□□□□ -1.1
CHRNB1-205ENST00000573209 PGPA6NDG6 321 aa8.2□□□□□ -1.1
CHRNB1-205ENST00000573209 NDUFC2-KCTD14E9PQ53 114 aa8.2□□□□□ -1.1
CHRNB1-205ENST00000573209 HERVK_113P61574 105 aa8.2□□□□□ -1.1
CHRNB1-205ENST00000573209 ATXN8Q156A1 80 aa8.2□□□□□ -1.1
CHRNB1-205ENST00000573209 DEFB121Q5J5C9 76 aa8.2□□□□□ -1.1
CHRNB1-205ENST00000573209 FAM53AQ6NSI3 398 aaPredicted RBP8.2□□□□□ -1.1
CHRNB1-205ENST00000573209 TMEM190Q8WZ59 177 aa8.2□□□□□ -1.1
CHRNB1-205ENST00000573209 U3KQK5 164 aa8.2□□□□□ -1.1
CHRNB1-205ENST00000573209 CACNA1DQ01668 2161 aa8.19□□□□□ -1.1
CHRNB1-205ENST00000573209 IGHV3-43A0A0B4J1X8 118 aa8.19□□□□□ -1.1
CHRNB1-205ENST00000573209 IGHV3-64DA0A0J9YX35 117 aa8.19□□□□□ -1.1
CHRNB1-205ENST00000573209 TRBV10-2A0A0K0K1G8 114 aa8.19□□□□□ -1.1
CHRNB1-205ENST00000573209 A8MZ25 164 aa8.19□□□□□ -1.1
CHRNB1-205ENST00000573209 LYZL6O75951 148 aa8.19□□□□□ -1.1
CHRNB1-205ENST00000573209 NDUFC2O95298 119 aa8.19□□□□□ -1.1
CHRNB1-205ENST00000573209 IGHV3-43DP0DP04 118 aa8.19□□□□□ -1.1
CHRNB1-205ENST00000573209 LINC00643Q86TS7 51 aa8.19□□□□□ -1.1
CHRNB1-205ENST00000573209 CXorf67Q86X51 503 aaPredicted RBP8.19□□□□□ -1.1
CHRNB1-205ENST00000573209 IL17DQ8TAD2 202 aa8.19□□□□□ -1.1
CHRNB1-205ENST00000573209 CNOT1A5YKK6 2376 aaKnown RBP8.19□□□□□ -1.1
CHRNB1-205ENST00000573209 LOC389332A0A1B0GUA5 103 aa8.19□□□□□ -1.1
CHRNB1-205ENST00000573209 A0A1W2PNU3 283 aaPredicted RBP8.19□□□□□ -1.1
CHRNB1-205ENST00000573209 INS-IGF2F8WCM5 200 aa8.19□□□□□ -1.1
CHRNB1-205ENST00000573209 GFRA3O60609 400 aa8.19□□□□□ -1.1
CHRNB1-205ENST00000573209 FCGR3BO75015 233 aa8.19□□□□□ -1.1
CHRNB1-205ENST00000573209 PRSS1P07477 247 aa8.19□□□□□ -1.1
CHRNB1-205ENST00000573209 P0DMU3 169 aa8.19□□□□□ -1.1
CHRNB1-205ENST00000573209 FAM231AP0DMU4 169 aa8.19□□□□□ -1.1
CHRNB1-205ENST00000573209 FAM231CP0DMU5 169 aa8.19□□□□□ -1.1
CHRNB1-205ENST00000573209 COL8A2P25067 703 aa8.19□□□□□ -1.1
CHRNB1-205ENST00000573209 LINC00311Q8N616 119 aa8.19□□□□□ -1.1
CHRNB1-205ENST00000573209 RPUSD1Q9UJJ7 312 aaKnown RBP8.19□□□□□ -1.1
CHRNB1-205ENST00000573209 CACNA1GO43497 2377 aa8.18□□□□□ -1.1
CHRNB1-205ENST00000573209 LINC01620Q4KN68 170 aa8.18□□□□□ -1.1
CHRNB1-205ENST00000573209 DPH3P1Q9H4G8 78 aa8.18□□□□□ -1.1
CHRNB1-205ENST00000573209 PYYP10082 97 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms