RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 ZNF138P52744 262 aa5.86□□□□□ -1.47
CTDNEP1-203ENST00000570385 XGP55808 180 aa5.86□□□□□ -1.47
CTDNEP1-203ENST00000570385 KRTAP10-1P60331 282 aa5.86□□□□□ -1.47
CTDNEP1-203ENST00000570385 ERVFC1-1P60608 527 aa5.86□□□□□ -1.47
CTDNEP1-203ENST00000570385 PDE6HQ13956 83 aa5.86□□□□□ -1.47
CTDNEP1-203ENST00000570385 MRPL23Q16540 153 aaKnown RBP5.86□□□□□ -1.47
CTDNEP1-203ENST00000570385 ATP6V1FQ16864 119 aa5.86□□□□□ -1.47
CTDNEP1-203ENST00000570385 LRRC37A5PQ49AS3 106 aa5.86□□□□□ -1.47
CTDNEP1-203ENST00000570385 IBA57Q5T440 356 aaKnown RBP5.86□□□□□ -1.47
CTDNEP1-203ENST00000570385 OR5C1Q8NGR4 320 aa5.86□□□□□ -1.47
CTDNEP1-203ENST00000570385 CHAC2Q8WUX2 184 aa5.86□□□□□ -1.47
CTDNEP1-203ENST00000570385 PHYHIPLQ96FC7 376 aa5.86□□□□□ -1.47
CTDNEP1-203ENST00000570385 ZNF479Q96JC4 524 aa5.86□□□□□ -1.47
CTDNEP1-203ENST00000570385 PAXXQ9BUH6 204 aa5.86□□□□□ -1.47
CTDNEP1-203ENST00000570385 OR51M1Q9H341 326 aa5.86□□□□□ -1.47
CTDNEP1-203ENST00000570385 PGPEP1Q9NXJ5 209 aa5.86□□□□□ -1.47
CTDNEP1-203ENST00000570385 A0A087WTM6 91 aa5.85□□□□□ -1.47
CTDNEP1-203ENST00000570385 FAM240BA0A1B0GVZ2 78 aa5.85□□□□□ -1.47
CTDNEP1-203ENST00000570385 RANP62826 216 aaKnown RBP5.85□□□□□ -1.47
CTDNEP1-203ENST00000570385 HAMPP81172 84 aa5.85□□□□□ -1.47
CTDNEP1-203ENST00000570385 ZNF415Q09FC8 603 aa5.85□□□□□ -1.47
CTDNEP1-203ENST00000570385 NEGR1Q7Z3B1 354 aa5.85□□□□□ -1.47
CTDNEP1-203ENST00000570385 WFDC10BQ8IUB3 73 aa5.85□□□□□ -1.47
CTDNEP1-203ENST00000570385 FXYD5Q96DB9 178 aa5.85□□□□□ -1.47
CTDNEP1-203ENST00000570385 PTTG2Q9NZH5 202 aa5.85□□□□□ -1.47
CTDNEP1-203ENST00000570385 OR5AC2Q9NZP5 309 aa5.85□□□□□ -1.47
CTDNEP1-203ENST00000570385 NAGKQ9UJ70 344 aa5.85□□□□□ -1.47
CTDNEP1-203ENST00000570385 K7EQD1 137 aa5.84□□□□□ -1.47
CTDNEP1-203ENST00000570385 OR7C2O60412 319 aa5.84□□□□□ -1.47
CTDNEP1-203ENST00000570385 SMR3BP02814 79 aaPredicted RBP5.84□□□□□ -1.47
CTDNEP1-203ENST00000570385 NMBP08949 121 aa5.84□□□□□ -1.47
CTDNEP1-203ENST00000570385 INAFM2P0DMQ5 153 aa5.84□□□□□ -1.47
CTDNEP1-203ENST00000570385 GYPEP15421 78 aa5.84□□□□□ -1.47
CTDNEP1-203ENST00000570385 SRIP30626 198 aa5.84□□□□□ -1.47
CTDNEP1-203ENST00000570385 TMEM183BQ1AE95 376 aa5.84□□□□□ -1.47
CTDNEP1-203ENST00000570385 TMEM183AQ8IXX5 376 aa5.84□□□□□ -1.47
CTDNEP1-203ENST00000570385 LYPD1Q8N2G4 141 aa5.84□□□□□ -1.47
CTDNEP1-203ENST00000570385 HYLS1Q96M11 299 aa5.84□□□□□ -1.47
CTDNEP1-203ENST00000570385 MRPL32Q9BYC8 188 aaKnown RBP5.84□□□□□ -1.47
CTDNEP1-203ENST00000570385 SLC25A31Q9H0C2 315 aa5.84□□□□□ -1.47
CTDNEP1-203ENST00000570385 RPH3ALQ9UNE2 315 aa5.84□□□□□ -1.47
CTDNEP1-203ENST00000570385 LY96Q9Y6Y9 160 aa5.84□□□□□ -1.47
CTDNEP1-203ENST00000570385 TRAV9-2A0A087WT02 112 aa5.83□□□□□ -1.48
CTDNEP1-203ENST00000570385 IGHV3-16A0A0C4DH30 117 aa5.83□□□□□ -1.48
CTDNEP1-203ENST00000570385 LOC100131303A0A0U1RQF7 123 aa5.83□□□□□ -1.48
CTDNEP1-203ENST00000570385 H0YIZ8 118 aa5.83□□□□□ -1.48
CTDNEP1-203ENST00000570385 IFNA5P01569 189 aa5.83□□□□□ -1.48
CTDNEP1-203ENST00000570385 CSN1S1P47710 185 aa5.83□□□□□ -1.48
CTDNEP1-203ENST00000570385 UBE2L3P68036 154 aaKnown RBP5.83□□□□□ -1.48
CTDNEP1-203ENST00000570385 SLAQ13239 276 aa5.83□□□□□ -1.48
CTDNEP1-203ENST00000570385 ZNF266Q14584 549 aa5.83□□□□□ -1.48
CTDNEP1-203ENST00000570385 NFE4Q86UQ8 179 aa5.83□□□□□ -1.48
CTDNEP1-203ENST00000570385 PCNPQ8WW12 178 aaKnown RBP5.83□□□□□ -1.48
CTDNEP1-203ENST00000570385 WDR61Q9GZS3 305 aaKnown RBP5.83□□□□□ -1.48
CTDNEP1-203ENST00000570385 MSRB1Q9NZV6 116 aa5.83□□□□□ -1.48
CTDNEP1-203ENST00000570385 GNRH2O43555 120 aa5.82□□□□□ -1.48
CTDNEP1-203ENST00000570385 EVI2AP22794 236 aa5.82□□□□□ -1.48
CTDNEP1-203ENST00000570385 FFAR4Q5NUL3 377 aa5.82□□□□□ -1.48
CTDNEP1-203ENST00000570385 Q5VSD8 79 aa5.82□□□□□ -1.48
CTDNEP1-203ENST00000570385 FAM159AQ6UWV7 190 aa5.82□□□□□ -1.48
CTDNEP1-203ENST00000570385 CCDC32Q9BV29 185 aa5.82□□□□□ -1.48
CTDNEP1-203ENST00000570385 SMIM3Q9BZL3 60 aa5.82□□□□□ -1.48
CTDNEP1-203ENST00000570385 HERC1Q15751 4861 aa5.82□□□□□ -1.48
CTDNEP1-203ENST00000570385 DIRC3C9JPN6 131 aa5.81□□□□□ -1.48
CTDNEP1-203ENST00000570385 C17orf112F2Z3M2 114 aa5.81□□□□□ -1.48
CTDNEP1-203ENST00000570385 F6UZH7 168 aa5.81□□□□□ -1.48
CTDNEP1-203ENST00000570385 CRYGDP07320 174 aa5.81□□□□□ -1.48
CTDNEP1-203ENST00000570385 CDPF1Q6NVV7 123 aa5.81□□□□□ -1.48
CTDNEP1-203ENST00000570385 MZT2BQ6NZ67 158 aa5.81□□□□□ -1.48
CTDNEP1-203ENST00000570385 NHLRC2Q8NBF2 726 aa5.81□□□□□ -1.48
CTDNEP1-203ENST00000570385 OR4C5Q8NGB2 326 aa5.81□□□□□ -1.48
CTDNEP1-203ENST00000570385 OR10G4Q8NGN3 311 aa5.81□□□□□ -1.48
CTDNEP1-203ENST00000570385 RASL10AQ92737 203 aa5.81□□□□□ -1.48
CTDNEP1-203ENST00000570385 FRZBQ92765 325 aa5.81□□□□□ -1.48
CTDNEP1-203ENST00000570385 TRGV11A0A075B6L2 103 aa5.8□□□□□ -1.48
CTDNEP1-203ENST00000570385 TRAV8-1A0A0A6YYK1 113 aa5.8□□□□□ -1.48
CTDNEP1-203ENST00000570385 TRBV7-9A0A0J9YWB2 115 aa5.8□□□□□ -1.48
CTDNEP1-203ENST00000570385 RBAKDNA6NC62 111 aa5.8□□□□□ -1.48
CTDNEP1-203ENST00000570385 PGPA6NDG6 321 aa5.8□□□□□ -1.48
CTDNEP1-203ENST00000570385 C9JCJ5 164 aa5.8□□□□□ -1.48
CTDNEP1-203ENST00000570385 HMGB3O15347 200 aaKnown RBP5.8□□□□□ -1.48
CTDNEP1-203ENST00000570385 GCSHP23434 173 aa5.8□□□□□ -1.48
CTDNEP1-203ENST00000570385 Q6AWC8 147 aa5.8□□□□□ -1.48
CTDNEP1-203ENST00000570385 GOLT1AQ6ZVE7 132 aa5.8□□□□□ -1.48
CTDNEP1-203ENST00000570385 IQCF2Q8IXL9 164 aa5.8□□□□□ -1.48
CTDNEP1-203ENST00000570385 CMTM2Q8TAZ6 248 aa5.8□□□□□ -1.48
CTDNEP1-203ENST00000570385 ENKURQ8TC29 256 aa5.8□□□□□ -1.48
CTDNEP1-203ENST00000570385 SGK494Q96LW2 274 aa5.8□□□□□ -1.48
CTDNEP1-203ENST00000570385 ATP5SQ99766 215 aa5.8□□□□□ -1.48
CTDNEP1-203ENST00000570385 TXNDC17Q9BRA2 123 aa5.8□□□□□ -1.48
CTDNEP1-203ENST00000570385 SPXQ9BT56 116 aa5.8□□□□□ -1.48
CTDNEP1-203ENST00000570385 NMES1Q9C002 83 aa5.8□□□□□ -1.48
CTDNEP1-203ENST00000570385 Q9HAA7 133 aa5.8□□□□□ -1.48
CTDNEP1-203ENST00000570385 KCNIP2Q9NS61 270 aa5.8□□□□□ -1.48
CTDNEP1-203ENST00000570385 IGLV5-52A0A0A0MRZ9 124 aa5.79□□□□□ -1.48
CTDNEP1-203ENST00000570385 IGHV3-73A0A0B4J1V6 119 aa5.79□□□□□ -1.48
CTDNEP1-203ENST00000570385 TRAV4A0A0B4J268 109 aa5.79□□□□□ -1.48
CTDNEP1-203ENST00000570385 M0R2P5 195 aa5.79□□□□□ -1.48
CTDNEP1-203ENST00000570385 PSCAO43653 123 aa5.79□□□□□ -1.48
CTDNEP1-203ENST00000570385 ORM1P02763 201 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms