RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 UBE2G1P62253 170 aa3.99□□□□□ -1.77
CAPN3-214ENST00000565274 PRCDQ00LT1 54 aa3.99□□□□□ -1.77
CAPN3-214ENST00000565274 C17orf58Q2M2W7 97 aa3.99□□□□□ -1.77
CAPN3-214ENST00000565274 C2orf83Q53S99 150 aa3.99□□□□□ -1.77
CAPN3-214ENST00000565274 KLF17Q5JT82 389 aaPredicted RBP3.99□□□□□ -1.77
CAPN3-214ENST00000565274 LYRM7Q5U5X0 104 aa3.99□□□□□ -1.77
CAPN3-214ENST00000565274 PVRIGQ6DKI7 326 aa3.99□□□□□ -1.77
CAPN3-214ENST00000565274 MIR17HGQ75NE6 70 aa3.99□□□□□ -1.77
CAPN3-214ENST00000565274 ATP5L2Q7Z4Y8 100 aa3.99□□□□□ -1.77
CAPN3-214ENST00000565274 C18orf32Q8TCD1 76 aa3.99□□□□□ -1.77
CAPN3-214ENST00000565274 CLEC7AQ9BXN2 247 aa3.99□□□□□ -1.77
CAPN3-214ENST00000565274 CALYQ9NYX4 217 aa3.99□□□□□ -1.77
CAPN3-214ENST00000565274 RBM12B-AS1Q9P1G2 102 aa3.99□□□□□ -1.77
CAPN3-214ENST00000565274 RPUSD1Q9UJJ7 312 aaKnown RBP3.99□□□□□ -1.77
CAPN3-214ENST00000565274 SPCS1Q9Y6A9 102 aa3.99□□□□□ -1.77
CAPN3-214ENST00000565274 USP34Q70CQ2 3546 aa3.99□□□□□ -1.77
CAPN3-214ENST00000565274 IGHV3-43A0A0B4J1X8 118 aa3.98□□□□□ -1.77
CAPN3-214ENST00000565274 MUC21A0A140T8X8 626 aa3.98□□□□□ -1.77
CAPN3-214ENST00000565274 A0A1B0GWB2 263 aa3.98□□□□□ -1.77
CAPN3-214ENST00000565274 UPK2O00526 184 aa3.98□□□□□ -1.77
CAPN3-214ENST00000565274 UQCRQO14949 82 aa3.98□□□□□ -1.77
CAPN3-214ENST00000565274 SLC25A5P05141 298 aaKnown RBP3.98□□□□□ -1.77
CAPN3-214ENST00000565274 IGHV3-43DP0DP04 118 aa3.98□□□□□ -1.77
CAPN3-214ENST00000565274 SUB1P53999 127 aaKnown RBP eCLIP3.98□□□□□ -1.77
CAPN3-214ENST00000565274 EBI3Q14213 229 aa3.98□□□□□ -1.77
CAPN3-214ENST00000565274 FXYD3Q14802 87 aa3.98□□□□□ -1.77
CAPN3-214ENST00000565274 RRN3P1Q2M238 152 aa3.98□□□□□ -1.77
CAPN3-214ENST00000565274 BEAN1Q3B7T3 259 aa3.98□□□□□ -1.77
CAPN3-214ENST00000565274 VMA21Q3ZAQ7 101 aa3.98□□□□□ -1.77
CAPN3-214ENST00000565274 MPV17L2Q567V2 206 aa3.98□□□□□ -1.77
CAPN3-214ENST00000565274 MUC21Q5SSG8 566 aa3.98□□□□□ -1.77
CAPN3-214ENST00000565274 FAM120AOSQ5T036 256 aa3.98□□□□□ -1.77
CAPN3-214ENST00000565274 C9orf153Q5TBE3 101 aa3.98□□□□□ -1.77
CAPN3-214ENST00000565274 FAM53AQ6NSI3 398 aaPredicted RBP3.98□□□□□ -1.77
CAPN3-214ENST00000565274 EBLN2Q6P2I7 272 aa3.98□□□□□ -1.77
CAPN3-214ENST00000565274 LINC00311Q8N616 119 aa3.98□□□□□ -1.77
CAPN3-214ENST00000565274 NUP37Q8NFH4 326 aa3.98□□□□□ -1.77
CAPN3-214ENST00000565274 FDCSPQ8NFU4 85 aa3.98□□□□□ -1.77
CAPN3-214ENST00000565274 OR4X2Q8NGF9 303 aa3.98□□□□□ -1.77
CAPN3-214ENST00000565274 OR10AG1Q8NH19 301 aa3.98□□□□□ -1.77
CAPN3-214ENST00000565274 RFESDQ8TAC1 157 aa3.98□□□□□ -1.77
CAPN3-214ENST00000565274 IGFBPL1Q8WX77 278 aa3.98□□□□□ -1.77
CAPN3-214ENST00000565274 NABP2Q9BQ15 211 aa3.98□□□□□ -1.77
CAPN3-214ENST00000565274 C16orf95Q9H693 158 aa3.98□□□□□ -1.77
CAPN3-214ENST00000565274 PTPRBP23467 1997 aa3.98□□□□□ -1.77
CAPN3-214ENST00000565274 CACNA1DQ01668 2161 aa3.97□□□□□ -1.77
CAPN3-214ENST00000565274 TRAV3A0A0B4J244 114 aa3.97□□□□□ -1.77
CAPN3-214ENST00000565274 A0A1B0GXF2 115 aa3.97□□□□□ -1.77
CAPN3-214ENST00000565274 A0A1W2PPM0 123 aa3.97□□□□□ -1.77
CAPN3-214ENST00000565274 C2orf70A6NJV1 201 aa3.97□□□□□ -1.77
CAPN3-214ENST00000565274 OOSP1A8MZH6 123 aa3.97□□□□□ -1.77
CAPN3-214ENST00000565274 FSTL3O95633 263 aa3.97□□□□□ -1.77
CAPN3-214ENST00000565274 CRYGAP11844 174 aa3.97□□□□□ -1.77
CAPN3-214ENST00000565274 IGLL1P15814 213 aa3.97□□□□□ -1.77
CAPN3-214ENST00000565274 ZNF137PP52743 207 aa3.97□□□□□ -1.77
CAPN3-214ENST00000565274 LPAL2Q16609 132 aa3.97□□□□□ -1.77
CAPN3-214ENST00000565274 ZNF833PQ6ZTB9 187 aa3.97□□□□□ -1.77
CAPN3-214ENST00000565274 PRR15Q8IV56 129 aa3.97□□□□□ -1.77
CAPN3-214ENST00000565274 C10orf126Q8N4M7 172 aa3.97□□□□□ -1.77
CAPN3-214ENST00000565274 ANKRD29Q8N6D5 301 aa3.97□□□□□ -1.77
CAPN3-214ENST00000565274 CNEP1R1Q8N9A8 125 aa3.97□□□□□ -1.77
CAPN3-214ENST00000565274 FAM19A4Q96LR4 140 aa3.97□□□□□ -1.77
CAPN3-214ENST00000565274 ZNF714Q96N38 554 aa3.97□□□□□ -1.77
CAPN3-214ENST00000565274 PRR25Q96S07 402 aa3.97□□□□□ -1.77
CAPN3-214ENST00000565274 PLEKHA3Q9HB20 300 aa3.97□□□□□ -1.77
CAPN3-214ENST00000565274 OTORQ9NRC9 128 aa3.97□□□□□ -1.77
CAPN3-214ENST00000565274 TNFRSF19Q9NS68 423 aa3.97□□□□□ -1.77
CAPN3-214ENST00000565274 ZNF256Q9Y2P7 627 aaPredicted RBP3.97□□□□□ -1.77
CAPN3-214ENST00000565274 WASHC3Q9Y3C0 194 aa3.97□□□□□ -1.77
CAPN3-214ENST00000565274 AMMECR1Q9Y4X0 333 aaPredicted RBP3.97□□□□□ -1.77
CAPN3-214ENST00000565274 LAMA1P25391 3075 aa3.97□□□□□ -1.77
CAPN3-214ENST00000565274 GTF3C1Q12789 2109 aa3.97□□□□□ -1.77
CAPN3-214ENST00000565274 WDR87Q6ZQQ6 2873 aa3.96□□□□□ -1.78
CAPN3-214ENST00000565274 PLAC8L1A1L4L8 177 aa3.96□□□□□ -1.78
CAPN3-214ENST00000565274 PCNX2A6NKB5 2137 aa3.96□□□□□ -1.78
CAPN3-214ENST00000565274 KNCNA6PVL3 124 aa3.96□□□□□ -1.78
CAPN3-214ENST00000565274 DEFB108AA8MXU0 73 aa3.96□□□□□ -1.78
CAPN3-214ENST00000565274 PEX7O00628 323 aa3.96□□□□□ -1.78
CAPN3-214ENST00000565274 SPINK4O60575 86 aa3.96□□□□□ -1.78
CAPN3-214ENST00000565274 SAA2P0DJI9 122 aaPredicted RBP3.96□□□□□ -1.78
CAPN3-214ENST00000565274 RNASE2P10153 161 aaKnown RBP3.96□□□□□ -1.78
CAPN3-214ENST00000565274 MGST1P10620 155 aaKnown RBP3.96□□□□□ -1.78
CAPN3-214ENST00000565274 LINC00205P59089 165 aa3.96□□□□□ -1.78
CAPN3-214ENST00000565274 UBE2L3P68036 154 aaKnown RBP3.96□□□□□ -1.78
CAPN3-214ENST00000565274 ESPL1Q14674 2120 aa3.96□□□□□ -1.78
CAPN3-214ENST00000565274 Q56UQ5 140 aa3.96□□□□□ -1.78
CAPN3-214ENST00000565274 RPL39P5Q59GN2 51 aa3.96□□□□□ -1.78
CAPN3-214ENST00000565274 ATP1A1-AS1Q5TC04 95 aa3.96□□□□□ -1.78
CAPN3-214ENST00000565274 GDF5OSQ5U4N7 250 aa3.96□□□□□ -1.78
CAPN3-214ENST00000565274 ZNF493Q6ZR52 646 aa3.96□□□□□ -1.78
CAPN3-214ENST00000565274 SPATA12Q7Z6I5 190 aa3.96□□□□□ -1.78
CAPN3-214ENST00000565274 FAM19A2Q8N3H0 131 aa3.96□□□□□ -1.78
CAPN3-214ENST00000565274 TMEM167AQ8TBQ9 72 aa3.96□□□□□ -1.78
CAPN3-214ENST00000565274 CHCHD1Q96BP2 118 aaKnown RBP3.96□□□□□ -1.78
CAPN3-214ENST00000565274 URB1-AS1Q96HZ7 61 aa3.96□□□□□ -1.78
CAPN3-214ENST00000565274 DOCK7Q96N67 2140 aa3.96□□□□□ -1.78
CAPN3-214ENST00000565274 GAFA1Q96PS6 74 aa3.96□□□□□ -1.78
CAPN3-214ENST00000565274 VGLL1Q99990 258 aa3.96□□□□□ -1.78
CAPN3-214ENST00000565274 MRPL20Q9BYC9 149 aaKnown RBP3.96□□□□□ -1.78
CAPN3-214ENST00000565274 NDUFA4L2Q9NRX3 87 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms