RNA–Protein interactions for RNA: ENST00000565113.5

DNAAF4-CCPG1-201, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene DNAAF4-CCPG1, Length 4,589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-201ENST00000565113 Q5PR19 223 aa3.88□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 GPHB5Q86YW7 130 aa3.88□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 NXT2Q9NPJ8 142 aaKnown RBP3.88□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 SPTBN1Q01082 2364 aaKnown RBP3.88□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 IGKV3-7A0A075B6H7 116 aa3.88□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 J3KRW8 73 aa3.88□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 EREGO14944 169 aa3.88□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 IGLC3P0DOY3 106 aa3.88□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 RNASE4P34096 147 aaKnown RBP3.88□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 SNRPD3P62318 126 aaKnown RBP3.88□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 OR8A1Q8NGG7 326 aa3.88□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 SNHG12Q9BXW3 62 aa3.88□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 SMG1Q96Q15 3661 aaKnown RBP3.88□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 KALRNO60229 2985 aa3.88□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 MS4A6AQ9H2W1 248 aa3.88□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 IGKV3D-20A0A0C4DH25 116 aa3.88□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 TRBV7-9A0A0J9YWB2 115 aa3.88□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 ELANEP08246 267 aa3.88□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 IGHV4-31P0DP07 118 aa3.88□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 PSMB8P28062 276 aa3.88□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 LEPP41159 167 aa3.88□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 COL5A1-AS1Q5SY13 56 aa3.88□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 LCNL1Q6ZST4 164 aa3.88□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 C20orf173Q96LM9 149 aa3.88□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 PHLDA3Q9Y5J5 127 aa3.88□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 NCR2O95944 276 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 NUTF2P61970 127 aaKnown RBP3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 Q6YL49 198 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 Q6ZS46 218 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 WFDC3Q8IUB2 231 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 MAPK1IP1LQ8NDC0 245 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 PMCHL2Q9BQD1 86 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 ZNF747Q9BV97 191 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 WNK2Q9Y3S1 2297 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 SMKR1H3BMG3 65 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 TNFRSF6BO95407 300 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 NPYP01303 97 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 TMEM95Q3KNT9 176 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 MRPS16Q9Y3D3 137 aaKnown RBP3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 CHD8Q9HCK8 2581 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 H3BVH4 76 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 SOCS3O14543 225 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 TCAPO15273 167 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 LGALS1P09382 135 aaKnown RBP3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 SLC25A34Q6PIV7 304 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 PRSS57Q6UWY2 283 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 MRAP2Q96G30 205 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 GOLT1BQ9Y3E0 138 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 SMIM17P0DL12 118 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 MED14OSP0DP75 135 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 IGLL1P15814 213 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 TSPOP30536 169 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 LINC01545Q5VT33 79 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 LINC00173Q6ZV60 143 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 SPATA12Q7Z6I5 190 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 OR2K2Q8NGT1 345 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 Q96MF0 132 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 BBC3Q96PG8 261 aaPredicted RBP3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 MSRB1Q9NZV6 116 aa3.87□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 SNAI2O43623 268 aa3.86□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 PPP1R17O96001 155 aa3.86□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 PSMG4Q5JS54 123 aa3.86□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 FAM159AQ6UWV7 190 aa3.86□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 Q8N8P6 123 aa3.86□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 RNF185Q96GF1 192 aa3.86□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 ABCA1O95477 2261 aa3.86□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 IGHV4-4A0A075B6R2 117 aa3.86□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 A0A096LNT2 108 aa3.86□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 HOXA3O43365 443 aaPredicted RBP3.86□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 SRD5A1P18405 259 aa3.86□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 EVI2AP22794 236 aa3.86□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 FCER1GP30273 86 aa3.86□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 MAJINQ3KP22 176 aa3.86□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 IFI27L1Q96BM0 104 aa3.86□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 PKD1L2Q7Z442 2459 aa3.86□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 HRNRQ86YZ3 2850 aaPredicted RBP3.86□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 M0R381 172 aa3.86□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 DUSP14O95147 198 aaKnown RBP3.86□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 TFPI2P48307 235 aa3.86□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 LINC00469Q8N7U9 141 aa3.86□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 MYOZ3Q8TDC0 251 aa3.86□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 UBE2E2Q96LR5 201 aa3.86□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 PSMG3-AS1Q96PY0 264 aa3.86□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 C11orf21Q9P2W6 132 aa3.86□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 hDV102S1A0JD36 115 aa3.85□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 LGALS9O00182 355 aa3.85□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 LGALS9BQ3B8N2 356 aa3.85□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 ANXA2RQ3ZCQ2 193 aa3.85□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 LGALS9CQ6DKI2 356 aa3.85□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 ZFAND2AQ8N6M9 145 aa3.85□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 OR1N2Q8NGR9 330 aa3.85□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 DPF1Q92782 380 aa3.85□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 AP1S3Q96PC3 154 aa3.85□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 DPH3P1Q9H4G8 78 aa3.85□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 ATP5LO75964 103 aa3.85□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 PRSS1P07477 247 aa3.85□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 MGPP08493 103 aa3.85□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 FOSL1P15407 271 aa3.85□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 SRSF1Q07955 248 aaKnown RBP eCLIP3.85□□□□□ -1.79
DNAAF4-CCPG1-201ENST00000565113 LAGE3Q14657 143 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms