RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	C11orf68	Q9H3H3	251 aa	Known RBP	3.4	□□□□□ -1.86
MACF1-231	ENST00000564288	IGHV3-13	P01766	116 aa		3.4	□□□□□ -1.86
MACF1-231	ENST00000564288	ARMS2	P0C7Q2	107 aa		3.4	□□□□□ -1.86
MACF1-231	ENST00000564288	COX7C	P15954	63 aa		3.4	□□□□□ -1.86
MACF1-231	ENST00000564288	CXorf67	Q86X51	503 aa	Predicted RBP	3.4	□□□□□ -1.86
MACF1-231	ENST00000564288	SERP2	Q8N6R1	65 aa		3.4	□□□□□ -1.86
MACF1-231	ENST00000564288	SIT1	Q9Y3P8	196 aa		3.4	□□□□□ -1.86
MACF1-231	ENST00000564288	HCFC1	P51610	2035 aa		3.4	□□□□□ -1.86
MACF1-231	ENST00000564288	C16orf97	H3BN30	126 aa		3.4	□□□□□ -1.86
MACF1-231	ENST00000564288	CECR9	P0C854	216 aa		3.4	□□□□□ -1.86
MACF1-231	ENST00000564288	GDF5OS	Q5U4N7	250 aa		3.4	□□□□□ -1.86
MACF1-231	ENST00000564288	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	3.4	□□□□□ -1.86
MACF1-231	ENST00000564288	SIGLEC15	Q6ZMC9	328 aa		3.4	□□□□□ -1.86
MACF1-231	ENST00000564288	C2orf91	Q6ZV80	131 aa		3.4	□□□□□ -1.86
MACF1-231	ENST00000564288	IGF2-AS	Q6U949	168 aa		3.4	□□□□□ -1.86
MACF1-231	ENST00000564288		B9A039	149 aa		3.4	□□□□□ -1.87
MACF1-231	ENST00000564288	RBM3	P98179	157 aa	Known RBP	3.4	□□□□□ -1.87
MACF1-231	ENST00000564288	TRAV8-3	A0A0A6YYJ7	113 aa		3.4	□□□□□ -1.87
MACF1-231	ENST00000564288	ODF1	Q14990	250 aa		3.4	□□□□□ -1.87
MACF1-231	ENST00000564288	RBMY1F	Q15415	496 aa	Known RBP	3.4	□□□□□ -1.87
MACF1-231	ENST00000564288	PLPPR2	Q96GM1	343 aa		3.4	□□□□□ -1.87
MACF1-231	ENST00000564288	KNCN	A6PVL3	124 aa		3.4	□□□□□ -1.87
MACF1-231	ENST00000564288		A4D1N5	150 aa		3.4	□□□□□ -1.87
MACF1-231	ENST00000564288	DENND4C	Q5VZ89	1909 aa		3.4	□□□□□ -1.87
MACF1-231	ENST00000564288	SRRM5	B3KS81	715 aa		3.4	□□□□□ -1.87
MACF1-231	ENST00000564288	CCL3	P10147	92 aa		3.4	□□□□□ -1.87
MACF1-231	ENST00000564288	ALKBH6	Q3KRA9	238 aa		3.4	□□□□□ -1.87
MACF1-231	ENST00000564288	SHISA2	Q6UWI4	295 aa		3.4	□□□□□ -1.87
MACF1-231	ENST00000564288	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		3.4	□□□□□ -1.87
MACF1-231	ENST00000564288	IGLC6	P0CF74	106 aa		3.4	□□□□□ -1.87
MACF1-231	ENST00000564288	ZNF826P	Q6ZT77	177 aa		3.4	□□□□□ -1.87
MACF1-231	ENST00000564288		P0C879	139 aa		3.4	□□□□□ -1.87
MACF1-231	ENST00000564288	HIST1H4A	P62805	103 aa	Known RBP	3.4	□□□□□ -1.87
MACF1-231	ENST00000564288	ZNF837	Q96EG3	531 aa	Predicted RBP	3.4	□□□□□ -1.87
MACF1-231	ENST00000564288	VSIG2	Q96IQ7	327 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	C19orf54	Q5BKX5	351 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	TRAV3	A0A0B4J244	114 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	C15orf65	H3BRN8	121 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	MUSTN1	Q8IVN3	82 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	TRIP6	Q15654	476 aa	Known RBP	3.39	□□□□□ -1.87
MACF1-231	ENST00000564288		M0R1W7	72 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	LINC00173	Q6ZV60	143 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	EXOC3-AS1	Q8N2X6	119 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	PEMT	Q9UBM1	199 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	PRO0628	Q9UI54	55 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	TRBV7-1	A0A0A6YYK4	115 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	TGFBR3L	H3BV60	316 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	JMJD8	Q96S16	334 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	CHCHD5	Q9BSY4	110 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	RNASE4	P34096	147 aa	Known RBP	3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	C9orf139	Q6ZV77	190 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	TRAV12-2	A0A075B6T6	113 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	CFAP126	Q5VTH2	177 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	IGHV1OR15-9	A0A0B4J2B8	117 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	FAM223B	A6NKX1	122 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	FAM223A	Q8IWN6	122 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	RASL10A	Q92737	203 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	EML6	Q6ZMW3	1958 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	TMEM240	Q5SV17	173 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	C2orf66	Q6UXQ4	117 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	IGHV5-10-1	A0A0J9YXX1	117 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	LINC00473	A8K010	186 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	RHOH	Q15669	191 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	C5orf63	A6NC05	138 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	CCL3L1	P16619	93 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	PPDPF	Q9H3Y8	114 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	ZMAT4	Q9H898	229 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	KAAG1	Q9UBP8	84 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	MGP	P08493	103 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	ZNRF2	Q8NHG8	242 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	AGPAT4-IT1	Q9H0P7	198 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	IGF2BP2-AS1	Q96M15	143 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	AJUBA	Q96IF1	538 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	SELENOK	Q9Y6D0	94 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	LYRM9	A8MSI8	78 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	JMJD7-PLA2G4B	H0Y9G9	81 aa		3.39	□□□□□ -1.87
MACF1-231	ENST00000564288	FRMD6-AS1	P0C7T7	363 aa		3.38	□□□□□ -1.87
MACF1-231	ENST00000564288	TOMM6	Q96B49	74 aa		3.38	□□□□□ -1.87
MACF1-231	ENST00000564288		K7ERJ3	54 aa		3.38	□□□□□ -1.87
MACF1-231	ENST00000564288	DAND5	Q8N907	189 aa		3.38	□□□□□ -1.87
MACF1-231	ENST00000564288	HELZ	P42694	1942 aa	Known RBP	3.38	□□□□□ -1.87
MACF1-231	ENST00000564288	THADA	Q6YHU6	1953 aa		3.38	□□□□□ -1.87
MACF1-231	ENST00000564288	COL4A1	P02462	1669 aa		3.38	□□□□□ -1.87
MACF1-231	ENST00000564288	IGFBP4	P22692	258 aa		3.38	□□□□□ -1.87
MACF1-231	ENST00000564288	FOXG1	P55316	489 aa	Predicted RBP	3.38	□□□□□ -1.87
MACF1-231	ENST00000564288	EEF1AKMT3	Q96AZ1	226 aa		3.38	□□□□□ -1.87
MACF1-231	ENST00000564288	CELA3B	P08861	270 aa		3.38	□□□□□ -1.87
MACF1-231	ENST00000564288	ODF3	Q96PU9	254 aa		3.38	□□□□□ -1.87
MACF1-231	ENST00000564288	PSPN	O60542	156 aa		3.38	□□□□□ -1.87
MACF1-231	ENST00000564288	SAA1	P0DJI8	122 aa	Predicted RBP	3.38	□□□□□ -1.87
MACF1-231	ENST00000564288	TMEM200B	Q69YZ2	307 aa		3.38	□□□□□ -1.87
MACF1-231	ENST00000564288	PLXND1	Q9Y4D7	1925 aa		3.38	□□□□□ -1.87
MACF1-231	ENST00000564288	SRRM4	A7MD48	611 aa	Known RBP	3.38	□□□□□ -1.87
MACF1-231	ENST00000564288		F5H768	121 aa		3.38	□□□□□ -1.87
MACF1-231	ENST00000564288	RNF125	Q96EQ8	232 aa		3.38	□□□□□ -1.87
MACF1-231	ENST00000564288	SERP1	Q9Y6X1	66 aa		3.38	□□□□□ -1.87
MACF1-231	ENST00000564288	LINC00694	P0DN24	101 aa		3.38	□□□□□ -1.87
MACF1-231	ENST00000564288	SEC61G	P60059	68 aa		3.38	□□□□□ -1.87
MACF1-231	ENST00000564288	SRXN1	Q9BYN0	137 aa		3.38	□□□□□ -1.87
MACF1-231	ENST00000564288	CSDC2	Q9Y534	153 aa	Known RBP	3.38	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 147 ms