RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 IFI27P40305 119 aaPredicted RBP4.13□□□□□ -1.75
GPHN-213ENST00000556501 LOXL1Q08397 574 aaPredicted RBP4.13□□□□□ -1.75
GPHN-213ENST00000556501 TMEM78Q5T7P6 136 aa4.13□□□□□ -1.75
GPHN-213ENST00000556501 SLC25A34Q6PIV7 304 aa4.13□□□□□ -1.75
GPHN-213ENST00000556501 BRD3OSQ6XYD6 125 aa4.13□□□□□ -1.75
GPHN-213ENST00000556501 DPF1Q92782 380 aa4.13□□□□□ -1.75
GPHN-213ENST00000556501 RNF185Q96GF1 192 aa4.13□□□□□ -1.75
GPHN-213ENST00000556501 TMEM208Q9BTX3 173 aa4.13□□□□□ -1.75
GPHN-213ENST00000556501 AGPAT4-IT1Q9H0P7 198 aa4.13□□□□□ -1.75
GPHN-213ENST00000556501 MS4A6AQ9H2W1 248 aa4.13□□□□□ -1.75
GPHN-213ENST00000556501 SCRT2Q9NQ03 307 aa4.13□□□□□ -1.75
GPHN-213ENST00000556501 C11orf21Q9P2W6 132 aa4.13□□□□□ -1.75
GPHN-213ENST00000556501 ZNF580Q9UK33 172 aa4.13□□□□□ -1.75
GPHN-213ENST00000556501 LENEPQ9Y5L5 61 aa4.13□□□□□ -1.75
GPHN-213ENST00000556501 CENPEQ02224 2701 aa4.13□□□□□ -1.75
GPHN-213ENST00000556501 SPTAN1Q13813 2472 aaKnown RBP4.13□□□□□ -1.75
GPHN-213ENST00000556501 MED13LQ71F56 2210 aa4.13□□□□□ -1.75
GPHN-213ENST00000556501 USP9XQ93008 2570 aaPredicted RBP4.12□□□□□ -1.75
GPHN-213ENST00000556501 IGHV3OR16-13A0A075B7E8 117 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 IGHV4-30-2A0A087WSY4 118 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 IGHV3-49A0A0A0MS15 119 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 IGHV3-74A0A0B4J1X5 117 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 IGKV3D-20A0A0C4DH25 116 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 IGHV3-66A0A0C4DH42 116 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 MUC21A0A0G2JKD1 596 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 MUC21A0A140T8X8 626 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 hDV102S1A0JD36 115 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 SMKR1H3BMG3 65 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 FAM229AH3BQW9 127 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 ZNF207O43670 478 aaKnown RBP4.12□□□□□ -1.75
GPHN-213ENST00000556501 NCR2O95944 276 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 HBDP02042 147 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 MSMBP08118 114 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 LORP23490 312 aaPredicted RBP4.12□□□□□ -1.75
GPHN-213ENST00000556501 PPIFP30405 207 aaKnown RBP4.12□□□□□ -1.75
GPHN-213ENST00000556501 CKS2P33552 79 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 TFPI2P48307 235 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 ATP5J2P56134 94 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 TWIST1Q15672 202 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 LGALS9BQ3B8N2 356 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 FAM106AQ4KMX7 169 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 MUC21Q5SSG8 566 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 LGALS9CQ6DKI2 356 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 Q6ZS46 218 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 USMG5Q96IX5 58 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 C16orf92Q96LL3 132 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 MAP1LC3AQ9H492 121 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 AKAP6Q13023 2319 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 ADGRG4Q8IZF6 3080 aa4.12□□□□□ -1.75
GPHN-213ENST00000556501 UBR5O95071 2799 aaPredicted RBP4.12□□□□□ -1.75
GPHN-213ENST00000556501 DCHS2Q6V1P9 2916 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 IGHV4-4A0A075B6R2 117 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 IGHV7-4-1A0A0J9YVY3 117 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 LOC389332A0A1B0GUA5 103 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 H3BUX3 64 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 SOCS3O14543 225 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 OVOL1O14753 267 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 SNAI2O43623 268 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 TCF21O43680 179 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 TRBV12-3P01733 135 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 HINT1P49773 126 aaPredicted RBP4.11□□□□□ -1.75
GPHN-213ENST00000556501 DSCR9P59020 149 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 CACNG7P62955 275 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 LY6EQ16553 131 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 PRR9Q5T870 116 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 SHISA2Q6UWI4 295 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 GPHB5Q86YW7 130 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 Q8N1Y9 231 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 ZNF738Q8NE65 137 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 OR8A1Q8NGG7 326 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 ORAOV1Q8WV07 137 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 RAX2Q96IS3 184 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 C20orf173Q96LM9 149 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 PMCHL2Q9BQD1 86 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 NXT2Q9NPJ8 142 aaKnown RBP4.11□□□□□ -1.75
GPHN-213ENST00000556501 MSRB1Q9NZV6 116 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 TP73-AS1Q9UF72 201 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 LINC00527Q9UJ94 153 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 GOLT1BQ9Y3E0 138 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 X6R8D5 127 aa4.11□□□□□ -1.75
GPHN-213ENST00000556501 UTP20O75691 2785 aaKnown RBP4.11□□□□□ -1.75
GPHN-213ENST00000556501 HELZ2Q9BYK8 2649 aaKnown RBP4.1□□□□□ -1.75
GPHN-213ENST00000556501 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.1□□□□□ -1.75
GPHN-213ENST00000556501 TRBV7-9A0A0J9YWB2 115 aa4.1□□□□□ -1.75
GPHN-213ENST00000556501 B4DSR2 109 aa4.1□□□□□ -1.75
GPHN-213ENST00000556501 H0Y8G0 127 aa4.1□□□□□ -1.75
GPHN-213ENST00000556501 TNFRSF6BO95407 300 aa4.1□□□□□ -1.75
GPHN-213ENST00000556501 IGLV1-40P01703 118 aa4.1□□□□□ -1.75
GPHN-213ENST00000556501 NPSP0C0P6 89 aa4.1□□□□□ -1.75
GPHN-213ENST00000556501 MED14OSP0DP75 135 aa4.1□□□□□ -1.75
GPHN-213ENST00000556501 COX8AP10176 69 aa4.1□□□□□ -1.75
GPHN-213ENST00000556501 GATA3P23771 443 aa4.1□□□□□ -1.75
GPHN-213ENST00000556501 FCER1GP30273 86 aa4.1□□□□□ -1.75
GPHN-213ENST00000556501 CFHR3Q02985 330 aa4.1□□□□□ -1.75
GPHN-213ENST00000556501 FOXE3Q13461 319 aa4.1□□□□□ -1.75
GPHN-213ENST00000556501 PRSS57Q6UWY2 283 aa4.1□□□□□ -1.75
GPHN-213ENST00000556501 UNQ9165/PRO28630Q6UXU0 137 aa4.1□□□□□ -1.75
GPHN-213ENST00000556501 APRG1Q8IVJ8 170 aa4.1□□□□□ -1.75
GPHN-213ENST00000556501 DEFB125Q8N687 156 aa4.1□□□□□ -1.75
GPHN-213ENST00000556501 ZFAND2AQ8N6M9 145 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms