RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 BUB1B-PAK6H3BSN5 160 aa13.2□□□□□ -0.3
PPP4R3A-202ENST00000554390 I3L2K1 104 aa13.2□□□□□ -0.3
PPP4R3A-202ENST00000554390 GFRALQ6UXV0 394 aa13.2□□□□□ -0.3
PPP4R3A-202ENST00000554390 MSRB1Q9NZV6 116 aa13.2□□□□□ -0.3
PPP4R3A-202ENST00000554390 IGHV3-66A0A0C4DH42 116 aa13.2□□□□□ -0.3
PPP4R3A-202ENST00000554390 A0A1B0GWB2 263 aa13.2□□□□□ -0.3
PPP4R3A-202ENST00000554390 DPM2O94777 84 aa13.2□□□□□ -0.3
PPP4R3A-202ENST00000554390 TRAV40A0A0B4J280 105 aa13.2□□□□□ -0.3
PPP4R3A-202ENST00000554390 K7EIM0 57 aa13.2□□□□□ -0.3
PPP4R3A-202ENST00000554390 LYPD1Q8N2G4 141 aa13.2□□□□□ -0.3
PPP4R3A-202ENST00000554390 EGR2P11161 476 aaPredicted RBP13.19□□□□□ -0.3
PPP4R3A-202ENST00000554390 H3BRN7 92 aa13.19□□□□□ -0.3
PPP4R3A-202ENST00000554390 TNFRSF13BO14836 293 aaPredicted RBP13.19□□□□□ -0.3
PPP4R3A-202ENST00000554390 CRYBG3Q68DQ2 2970 aa13.19□□□□□ -0.3
PPP4R3A-202ENST00000554390 IGLV1-47P01700 117 aa13.18□□□□□ -0.3
PPP4R3A-202ENST00000554390 RRN3P1Q2M238 152 aa13.18□□□□□ -0.3
PPP4R3A-202ENST00000554390 RNF185Q96GF1 192 aa13.18□□□□□ -0.3
PPP4R3A-202ENST00000554390 MRPL16Q9NX20 251 aaKnown RBP13.18□□□□□ -0.3
PPP4R3A-202ENST00000554390 APOMO95445 188 aa13.18□□□□□ -0.3
PPP4R3A-202ENST00000554390 TTC9CQ8N5M4 171 aa13.18□□□□□ -0.3
PPP4R3A-202ENST00000554390 ZNF491Q8N8L2 437 aa13.18□□□□□ -0.3
PPP4R3A-202ENST00000554390 TMEM158Q8WZ71 300 aa13.18□□□□□ -0.3
PPP4R3A-202ENST00000554390 HIST1H4GQ99525 98 aa13.18□□□□□ -0.3
PPP4R3A-202ENST00000554390 SPTBN4Q9H254 2564 aa13.18□□□□□ -0.3
PPP4R3A-202ENST00000554390 IGHV3-49A0A0A0MS15 119 aa13.17□□□□□ -0.3
PPP4R3A-202ENST00000554390 CRYGBP07316 175 aa13.17□□□□□ -0.3
PPP4R3A-202ENST00000554390 IGFL3Q6UXB1 125 aa13.17□□□□□ -0.3
PPP4R3A-202ENST00000554390 LINC00311Q8N616 119 aa13.17□□□□□ -0.3
PPP4R3A-202ENST00000554390 RNF125Q96EQ8 232 aa13.17□□□□□ -0.3
PPP4R3A-202ENST00000554390 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.17□□□□□ -0.3
PPP4R3A-202ENST00000554390 MRPS12O15235 138 aaKnown RBP13.17□□□□□ -0.3
PPP4R3A-202ENST00000554390 TNFRSF6BO95407 300 aa13.17□□□□□ -0.3
PPP4R3A-202ENST00000554390 TAL2Q16559 108 aa13.17□□□□□ -0.3
PPP4R3A-202ENST00000554390 SYT8Q8NBV8 401 aa13.17□□□□□ -0.3
PPP4R3A-202ENST00000554390 ZNF48Q96MX3 618 aaPredicted RBP13.17□□□□□ -0.3
PPP4R3A-202ENST00000554390 MRPL35Q9NZE8 188 aaKnown RBP13.17□□□□□ -0.3
PPP4R3A-202ENST00000554390 LINC01546A6NGU7 62 aa13.16□□□□□ -0.3
PPP4R3A-202ENST00000554390 ATP5LO75964 103 aa13.16□□□□□ -0.3
PPP4R3A-202ENST00000554390 GATA1P15976 413 aaPredicted RBP13.16□□□□□ -0.3
PPP4R3A-202ENST00000554390 LCNL1Q6ZST4 164 aa13.16□□□□□ -0.3
PPP4R3A-202ENST00000554390 C8orf86Q6ZUL3 223 aa13.16□□□□□ -0.3
PPP4R3A-202ENST00000554390 FAM90A27PA6NNH2 459 aa13.16□□□□□ -0.3
PPP4R3A-202ENST00000554390 NCBP2LA6PVI3 153 aaKnown RBP13.16□□□□□ -0.3
PPP4R3A-202ENST00000554390 HLA-DRB4P13762 266 aa13.16□□□□□ -0.3
PPP4R3A-202ENST00000554390 ZNF80P51504 273 aaPredicted RBP13.16□□□□□ -0.3
PPP4R3A-202ENST00000554390 AAMDCQ9H7C9 122 aa13.16□□□□□ -0.3
PPP4R3A-202ENST00000554390 NXT2Q9NPJ8 142 aaKnown RBP13.16□□□□□ -0.3
PPP4R3A-202ENST00000554390 HLA-DRB4X5D2U9 266 aa13.16□□□□□ -0.3
PPP4R3A-202ENST00000554390 FOXI1Q12951 378 aa13.15□□□□□ -0.3
PPP4R3A-202ENST00000554390 CDIP1Q9H305 208 aa13.15□□□□□ -0.3
PPP4R3A-202ENST00000554390 SPRY2O43597 315 aa13.15□□□□□ -0.3
PPP4R3A-202ENST00000554390 SPINK8P0C7L1 97 aa13.15□□□□□ -0.3
PPP4R3A-202ENST00000554390 TMEM190Q8WZ59 177 aa13.15□□□□□ -0.3
PPP4R3A-202ENST00000554390 IGLC6P0CF74 106 aa13.14□□□□□ -0.31
PPP4R3A-202ENST00000554390 NDPQ00604 133 aa13.14□□□□□ -0.31
PPP4R3A-202ENST00000554390 ZNF418Q8TF45 676 aaPredicted RBP13.14□□□□□ -0.31
PPP4R3A-202ENST00000554390 ERCC8Q13216 396 aa13.14□□□□□ -0.31
PPP4R3A-202ENST00000554390 Q6ZQT7 251 aa13.14□□□□□ -0.31
PPP4R3A-202ENST00000554390 Q8NA96 180 aa13.14□□□□□ -0.31
PPP4R3A-202ENST00000554390 PRR25Q96S07 402 aa13.14□□□□□ -0.31
PPP4R3A-202ENST00000554390 ZNF575Q86XF7 245 aa13.13□□□□□ -0.31
PPP4R3A-202ENST00000554390 CYSLTR1Q9Y271 337 aa13.13□□□□□ -0.31
PPP4R3A-202ENST00000554390 MT-ATP8P03928 68 aa13.13□□□□□ -0.31
PPP4R3A-202ENST00000554390 TRBV7-3A0A075B6L6 115 aa13.12□□□□□ -0.31
PPP4R3A-202ENST00000554390 C8orf31Q8N9H6 132 aa13.12□□□□□ -0.31
PPP4R3A-202ENST00000554390 C1QTNF4Q9BXJ3 329 aa13.12□□□□□ -0.31
PPP4R3A-202ENST00000554390 ASCL5Q7RTU5 278 aa13.12□□□□□ -0.31
PPP4R3A-202ENST00000554390 RNF182Q8N6D2 247 aa13.12□□□□□ -0.31
PPP4R3A-202ENST00000554390 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.12□□□□□ -0.317e-7■■■■□ 26.2
PPP4R3A-202ENST00000554390 NDUFA3O95167 84 aa13.11□□□□□ -0.31
PPP4R3A-202ENST00000554390 ORM1P02763 201 aa13.11□□□□□ -0.31
PPP4R3A-202ENST00000554390 SMCPP49901 116 aaPredicted RBP13.11□□□□□ -0.31
PPP4R3A-202ENST00000554390 LINC01559Q495D7 138 aa13.11□□□□□ -0.31
PPP4R3A-202ENST00000554390 MORN3Q6PF18 240 aaPredicted RBP13.11□□□□□ -0.31
PPP4R3A-202ENST00000554390 NFE4Q86UQ8 179 aa13.11□□□□□ -0.31
PPP4R3A-202ENST00000554390 DEFB104AQ8WTQ1 72 aa13.11□□□□□ -0.31
PPP4R3A-202ENST00000554390 CELSR2Q9HCU4 2923 aa13.11□□□□□ -0.31
PPP4R3A-202ENST00000554390 DYNAPQ8N1N2 210 aa13.11□□□□□ -0.31
PPP4R3A-202ENST00000554390 FHL3Q13643 280 aa13.11□□□□□ -0.31
PPP4R3A-202ENST00000554390 CDSNQ15517 529 aa13.11□□□□□ -0.31
PPP4R3A-202ENST00000554390 J3KRW8 73 aa13.1□□□□□ -0.31
PPP4R3A-202ENST00000554390 CFAP126Q5VTH2 177 aa13.1□□□□□ -0.31
PPP4R3A-202ENST00000554390 Q8N8P6 123 aa13.1□□□□□ -0.31
PPP4R3A-202ENST00000554390 MYOZ3Q8TDC0 251 aa13.1□□□□□ -0.31
PPP4R3A-202ENST00000554390 PRAC2D3DTV9 90 aa13.1□□□□□ -0.31
PPP4R3A-202ENST00000554390 PDE6HQ13956 83 aa13.1□□□□□ -0.31
PPP4R3A-202ENST00000554390 COX8CQ7Z4L0 72 aa13.1□□□□□ -0.31
PPP4R3A-202ENST00000554390 GLMPQ8WWB7 406 aa13.1□□□□□ -0.31
PPP4R3A-202ENST00000554390 CSMD2Q7Z408 3487 aa13.09□□□□□ -0.31
PPP4R3A-202ENST00000554390 HOXA3O43365 443 aaPredicted RBP13.09□□□□□ -0.31
PPP4R3A-202ENST00000554390 PGPEP1Q9NXJ5 209 aa13.09□□□□□ -0.31
PPP4R3A-202ENST00000554390 IGLV2-18A0A075B6J9 118 aa13.09□□□□□ -0.31
PPP4R3A-202ENST00000554390 XGP55808 180 aa13.09□□□□□ -0.31
PPP4R3A-202ENST00000554390 A0A087WX48 190 aa13.08□□□□□ -0.31
PPP4R3A-202ENST00000554390 GATA3P23771 443 aa13.08□□□□□ -0.31
PPP4R3A-202ENST00000554390 Q6ZUT4 128 aa13.08□□□□□ -0.31
PPP4R3A-202ENST00000554390 DTX2Q86UW9 622 aa13.08□□□□□ -0.31
PPP4R3A-202ENST00000554390 FANCD2OSQ96PS1 177 aa13.08□□□□□ -0.31
PPP4R3A-202ENST00000554390 KAAG1Q9UBP8 84 aa13.08□□□□□ -0.31
PPP4R3A-202ENST00000554390 ZNF672Q499Z4 452 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms