RNA–Protein interactions for RNA: ENST00000553876.2

RBM23-208, Transcript of RNA binding motif protein 23, human

TSL 3

Gene RBM23, Length 267 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM23-208	ENST00000553876	ZDBF2	Q9HCK1	2354 aa		0.76	□□□□□ -2.29
RBM23-208	ENST00000553876	USP54	Q70EL1	1684 aa		0.76	□□□□□ -2.29
RBM23-208	ENST00000553876	RIMS1	Q86UR5	1692 aa	Known RBP	0.76	□□□□□ -2.29
RBM23-208	ENST00000553876	DEPDC5	O75140	1603 aa		0.76	□□□□□ -2.29
RBM23-208	ENST00000553876	KDM5C	P41229	1560 aa		0.76	□□□□□ -2.29
RBM23-208	ENST00000553876	FAM135A	Q9P2D6	1515 aa		0.76	□□□□□ -2.29
RBM23-208	ENST00000553876	ATP10B	O94823	1461 aa		0.76	□□□□□ -2.29
RBM23-208	ENST00000553876	PTPRM	P28827	1452 aa		0.76	□□□□□ -2.29
RBM23-208	ENST00000553876	GOLGA3	Q08378	1498 aa		0.76	□□□□□ -2.29
RBM23-208	ENST00000553876	PRX	Q9BXM0	1461 aa		0.76	□□□□□ -2.29
RBM23-208	ENST00000553876	WDR7	Q9Y4E6	1490 aa		0.76	□□□□□ -2.29
RBM23-208	ENST00000553876	PTPRG	P23470	1445 aa		0.76	□□□□□ -2.29
RBM23-208	ENST00000553876	TRAC	P01848	142 aa		0.76	□□□□□ -2.29
RBM23-208	ENST00000553876	FXYD4	P59646	89 aa		0.76	□□□□□ -2.29
RBM23-208	ENST00000553876	NEDD8	Q15843	81 aa		0.76	□□□□□ -2.29
RBM23-208	ENST00000553876	CASC2	Q6XLA1	102 aa		0.76	□□□□□ -2.29
RBM23-208	ENST00000553876	LINC00305	Q7Z4B0	112 aa		0.76	□□□□□ -2.29
RBM23-208	ENST00000553876	RMND5B	Q96G75	393 aa	Predicted RBP	0.76	□□□□□ -2.29
RBM23-208	ENST00000553876	SMPX	Q9UHP9	88 aa		0.76	□□□□□ -2.29
RBM23-208	ENST00000553876	MYH1	P12882	1939 aa		0.76	□□□□□ -2.29
RBM23-208	ENST00000553876	MARF1	Q9Y4F3	1742 aa	Known RBP	0.75	□□□□□ -2.29
RBM23-208	ENST00000553876	ZC3H13	Q5T200	1668 aa	Known RBP	0.75	□□□□□ -2.29
RBM23-208	ENST00000553876	ITSN2	Q9NZM3	1697 aa		0.75	□□□□□ -2.29
RBM23-208	ENST00000553876	RAPGEF6	Q8TEU7	1601 aa		0.75	□□□□□ -2.29
RBM23-208	ENST00000553876	MADD	Q8WXG6	1647 aa		0.75	□□□□□ -2.29
RBM23-208	ENST00000553876	EFCAB5	A4FU69	1503 aa		0.75	□□□□□ -2.29
RBM23-208	ENST00000553876	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	0.75	□□□□□ -2.29
RBM23-208	ENST00000553876	DLC1	Q96QB1	1528 aa		0.75	□□□□□ -2.29
RBM23-208	ENST00000553876	TCOF1	Q13428	1488 aa	Known RBP	0.75	□□□□□ -2.29
RBM23-208	ENST00000553876	MLH3	Q9UHC1	1453 aa		0.75	□□□□□ -2.29
RBM23-208	ENST00000553876	RAPGEF2	Q9Y4G8	1499 aa		0.75	□□□□□ -2.29
RBM23-208	ENST00000553876		A0A0J9YY99	117 aa		0.75	□□□□□ -2.29
RBM23-208	ENST00000553876	C3orf85	A0A1B0GTC6	90 aa		0.75	□□□□□ -2.29
RBM23-208	ENST00000553876	FAM107A	O95990	144 aa		0.75	□□□□□ -2.29
RBM23-208	ENST00000553876	TPT1	P13693	172 aa	Known RBP	0.75	□□□□□ -2.29
RBM23-208	ENST00000553876	HRCT1	Q6UXD1	115 aa		0.75	□□□□□ -2.29
RBM23-208	ENST00000553876	THEM6	Q8WUY1	208 aa		0.75	□□□□□ -2.29
RBM23-208	ENST00000553876	CLEC2B	Q92478	149 aa		0.75	□□□□□ -2.29
RBM23-208	ENST00000553876	LXN	Q9BS40	222 aa		0.75	□□□□□ -2.29
RBM23-208	ENST00000553876	NIT2	Q9NQR4	276 aa		0.75	□□□□□ -2.29
RBM23-208	ENST00000553876	MED31	Q9Y3C7	131 aa		0.75	□□□□□ -2.29
RBM23-208	ENST00000553876	TRPM7	Q96QT4	1865 aa		0.75	□□□□□ -2.29
RBM23-208	ENST00000553876	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	0.75	□□□□□ -2.29
RBM23-208	ENST00000553876	LAMC1	P11047	1609 aa		0.75	□□□□□ -2.29
RBM23-208	ENST00000553876	PREX2	Q70Z35	1606 aa		0.75	□□□□□ -2.29
RBM23-208	ENST00000553876	ALK	Q9UM73	1620 aa		0.75	□□□□□ -2.29
RBM23-208	ENST00000553876	PLXNC1	O60486	1568 aa		0.74	□□□□□ -2.29
RBM23-208	ENST00000553876	MED14	O60244	1454 aa		0.74	□□□□□ -2.29
RBM23-208	ENST00000553876	BCL9	O00512	1426 aa		0.74	□□□□□ -2.29
RBM23-208	ENST00000553876	ATG2A	Q2TAZ0	1938 aa		0.74	□□□□□ -2.29
RBM23-208	ENST00000553876	SBF2	Q86WG5	1849 aa		0.74	□□□□□ -2.29
RBM23-208	ENST00000553876	TRBV30	A0A0K0K1B3	111 aa		0.74	□□□□□ -2.29
RBM23-208	ENST00000553876	NUPR2	A6NF83	97 aa		0.74	□□□□□ -2.29
RBM23-208	ENST00000553876	ZNF727	A8MUV8	499 aa		0.74	□□□□□ -2.29
RBM23-208	ENST00000553876	IFNA21	P01568	189 aa		0.74	□□□□□ -2.29
RBM23-208	ENST00000553876	MAX	P61244	160 aa		0.74	□□□□□ -2.29
RBM23-208	ENST00000553876	TEX29	Q8N6K0	151 aa		0.74	□□□□□ -2.29
RBM23-208	ENST00000553876	GRPEL2	Q8TAA5	225 aa		0.74	□□□□□ -2.29
RBM23-208	ENST00000553876	UBR1	Q8IWV7	1749 aa		0.74	□□□□□ -2.29
RBM23-208	ENST00000553876	CLTC	Q00610	1675 aa	Known RBP	0.74	□□□□□ -2.29
RBM23-208	ENST00000553876	KIF14	Q15058	1648 aa		0.74	□□□□□ -2.29
RBM23-208	ENST00000553876	ABCA6	Q8N139	1617 aa		0.74	□□□□□ -2.29
RBM23-208	ENST00000553876	RNF17	Q9BXT8	1623 aa	Known RBP	0.74	□□□□□ -2.29
RBM23-208	ENST00000553876	SAMD9L	Q8IVG5	1584 aa		0.74	□□□□□ -2.29
RBM23-208	ENST00000553876	INO80	Q9ULG1	1556 aa	Predicted RBP	0.74	□□□□□ -2.29
RBM23-208	ENST00000553876	DIP2C	Q9Y2E4	1556 aa		0.74	□□□□□ -2.29
RBM23-208	ENST00000553876	CPS1	P31327	1500 aa		0.74	□□□□□ -2.29
RBM23-208	ENST00000553876	FANCA	O15360	1455 aa		0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	NCOA2	Q15596	1464 aa		0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	EEA1	Q15075	1411 aa		0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	CNTLN	Q9NXG0	1405 aa		0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	RGPD8	O14715	1765 aa	Predicted RBP	0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	SPHKAP	Q2M3C7	1700 aa		0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	TET3	O43151	1660 aa		0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	IQGAP1	P46940	1657 aa		0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	SHPRH	Q149N8	1683 aa		0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	TRAV13-1	A0A0B4J241	112 aa		0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	TRBV27	A0A0K0K1C4	114 aa		0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	SAA1	P0DJI8	122 aa	Predicted RBP	0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	PDE6G	P18545	87 aa		0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	POLR2H	P52434	150 aa	Known RBP	0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	TFAM	Q00059	246 aa	Known RBP	0.73	□□□□□ -2.29
RBM23-208	ENST00000553876		Q6ZQY7	126 aa		0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	KRTAP19-3	Q7Z4W3	81 aa		0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	SELENOS	Q9BQE4	189 aa		0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	MYO3A	Q8NEV4	1616 aa		0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	EIF2AK4	Q9P2K8	1649 aa	Known RBP	0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	MAST1	Q9Y2H9	1570 aa		0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	SLIT1	O75093	1534 aa		0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	ABCC1	P33527	1531 aa		0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	MAP3K1	Q13233	1512 aa		0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	ZFYVE16	Q7Z3T8	1539 aa		0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	KDM5D	Q9BY66	1539 aa		0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	ZNF518A	Q6AHZ1	1483 aa		0.73	□□□□□ -2.29
RBM23-208	ENST00000553876	ARHGAP31	Q2M1Z3	1444 aa		0.72	□□□□□ -2.29
RBM23-208	ENST00000553876	NCOA3	Q9Y6Q9	1424 aa		0.72	□□□□□ -2.29
RBM23-208	ENST00000553876	CEP152	O94986	1710 aa		0.72	□□□□□ -2.29
RBM23-208	ENST00000553876	QSER1	Q2KHR3	1735 aa		0.72	□□□□□ -2.29

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms