RNA–Protein interactions for RNA: ENST00000553876.2

RBM23-208, Transcript of RNA binding motif protein 23, humanhuman

TSL 3

Gene RBM23, Length 267 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM23-208ENST00000553876 AEBP2Q6ZN18 517 aaPredicted RBP24.14■■□□□ 1.45
RBM23-208ENST00000553876 CHIC1Q5VXU3 224 aa23.31■■□□□ 1.32
RBM23-208ENST00000553876 PHF23Q9BUL5 403 aaPredicted RBP20.55■□□□□ 0.88
RBM23-208ENST00000553876 SENP3Q9H4L4 574 aaPredicted RBP20.38■□□□□ 0.85
RBM23-208ENST00000553876 FOXD1Q16676 465 aa19.01■□□□□ 0.63
RBM23-208ENST00000553876 PLPPR3Q6T4P5 718 aa18.79■□□□□ 0.6
RBM23-208ENST00000553876 PPP6R1Q9UPN7 881 aa18.19■□□□□ 0.5
RBM23-208ENST00000553876 ADRA2BP18089 450 aa18.13■□□□□ 0.49
RBM23-208ENST00000553876 PIAS4Q8N2W9 510 aaPredicted RBP17.84■□□□□ 0.45
RBM23-208ENST00000553876 MSH5O43196 834 aa17.5■□□□□ 0.39
RBM23-208ENST00000553876 PPP4R3CPQ6ZMV5 832 aa16.57■□□□□ 0.24
RBM23-208ENST00000553876 MAPK8IP2Q13387 824 aaPredicted RBP16.51■□□□□ 0.23
RBM23-208ENST00000553876 SCAF1Q9H7N4 1312 aaKnown RBP16.42■□□□□ 0.22
RBM23-208ENST00000553876 POTEDQ86YR6 584 aa16.33■□□□□ 0.2
RBM23-208ENST00000553876 DMRT2Q9Y5R5 561 aa16.28■□□□□ 0.2
RBM23-208ENST00000553876 CNKSR2Q8WXI2 1034 aa16.11■□□□□ 0.17
RBM23-208ENST00000553876 KCNA4P22459 653 aa16.06■□□□□ 0.16
RBM23-208ENST00000553876 NCBP3Q53F19 620 aaKnown RBP15.99■□□□□ 0.15
RBM23-208ENST00000553876 NPM3O75607 178 aaKnown RBP15.89■□□□□ 0.13
RBM23-208ENST00000553876 HOXD11P31277 338 aaPredicted RBP15.87■□□□□ 0.13
RBM23-208ENST00000553876 RNF216Q9NWF9 866 aaPredicted RBP15.86■□□□□ 0.13
RBM23-208ENST00000553876 DCAF8L1A6NGE4 600 aa15.52■□□□□ 0.08
RBM23-208ENST00000553876 DNAJC5BQ9UF47 199 aa15.43■□□□□ 0.06
RBM23-208ENST00000553876 SLC4A1APQ9BWU0 796 aaKnown RBP15.19■□□□□ 0.02
RBM23-208ENST00000553876 SLC4A2P04920 1241 aa15.09■□□□□ 0.01
RBM23-208ENST00000553876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.05■□□□□ -0
RBM23-208ENST00000553876 RNF39Q9H2S5 420 aa15.05■□□□□ -0
RBM23-208ENST00000553876 U3KPZ7 1027 aaPredicted RBP14.9□□□□□ -0.02
RBM23-208ENST00000553876 ZBTB22O15209 634 aa14.84□□□□□ -0.03
RBM23-208ENST00000553876 C1QBPQ07021 282 aaKnown RBP14.79□□□□□ -0.04
RBM23-208ENST00000553876 FOXD4L1Q9NU39 408 aa14.76□□□□□ -0.05
RBM23-208ENST00000553876 CACNB1Q02641 598 aaPredicted RBP14.71□□□□□ -0.05
RBM23-208ENST00000553876 MYCNP04198 464 aaPredicted RBP14.63□□□□□ -0.07
RBM23-208ENST00000553876 EHMT2Q96KQ7 1210 aa14.6□□□□□ -0.07
RBM23-208ENST00000553876 SPINK5Q9NQ38 1064 aaPredicted RBP14.54□□□□□ -0.08
RBM23-208ENST00000553876 CSRNP3Q8WYN3 585 aa14.53□□□□□ -0.08
RBM23-208ENST00000553876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.49□□□□□ -0.09
RBM23-208ENST00000553876 HNRNPUL2Q1KMD3 747 aaKnown RBP14.49□□□□□ -0.09
RBM23-208ENST00000553876 SAMD1Q6SPF0 538 aaPredicted RBP14.47□□□□□ -0.09
RBM23-208ENST00000553876 CAPN15O75808 1086 aa14.4□□□□□ -0.1
RBM23-208ENST00000553876 ATF5Q9Y2D1 282 aaPredicted RBP14.36□□□□□ -0.11
RBM23-208ENST00000553876 APLP2Q06481 763 aa14.35□□□□□ -0.11
RBM23-208ENST00000553876 TRHP20396 242 aaPredicted RBP14.3□□□□□ -0.12
RBM23-208ENST00000553876 DSG3P32926 999 aa14.26□□□□□ -0.13
RBM23-208ENST00000553876 ZNF219Q9P2Y4 722 aaPredicted RBP14.26□□□□□ -0.13
RBM23-208ENST00000553876 ATXN8OSP0DMR3 200 aa14.21□□□□□ -0.13
RBM23-208ENST00000553876 ABCB7O75027 752 aa14.17□□□□□ -0.14
RBM23-208ENST00000553876 POLA2Q14181 598 aa14.03□□□□□ -0.16
RBM23-208ENST00000553876 MKRN4PQ13434 485 aaPredicted RBP13.73□□□□□ -0.21
RBM23-208ENST00000553876 ZBTB12Q9Y330 459 aaPredicted RBP13.73□□□□□ -0.21
RBM23-208ENST00000553876 OSCARQ8IYS5 282 aa13.64□□□□□ -0.23
RBM23-208ENST00000553876 FBLN2P98095 1184 aa13.61□□□□□ -0.23
RBM23-208ENST00000553876 RBM42Q9BTD8 480 aaKnown RBP13.49□□□□□ -0.25
RBM23-208ENST00000553876 SPDYE2BA6NHP3 402 aa13.39□□□□□ -0.27
RBM23-208ENST00000553876 SPDYE6P0CI01 402 aa13.39□□□□□ -0.27
RBM23-208ENST00000553876 SPDYE2Q495Y8 402 aa13.39□□□□□ -0.27
RBM23-208ENST00000553876 SSUH2Q9Y2M2 353 aa13.34□□□□□ -0.27
RBM23-208ENST00000553876 AKT1S1Q96B36 256 aa13.32□□□□□ -0.28
RBM23-208ENST00000553876 ZNF692Q9BU19 519 aaPredicted RBP13.29□□□□□ -0.28
RBM23-208ENST00000553876 SPDYE4A6NLX3 237 aa13.24□□□□□ -0.29
RBM23-208ENST00000553876 REM2Q8IYK8 340 aaPredicted RBP13.24□□□□□ -0.29
RBM23-208ENST00000553876 PABPN1Q86U42 306 aaKnown RBP eCLIP13.15□□□□□ -0.3
RBM23-208ENST00000553876 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
RBM23-208ENST00000553876 FKBP8Q14318 412 aa13.11□□□□□ -0.31
RBM23-208ENST00000553876 PROM2Q8N271 834 aa13.08□□□□□ -0.32
RBM23-208ENST00000553876 CHRDL2Q6WN34 429 aa13.07□□□□□ -0.32
RBM23-208ENST00000553876 SPDYE1Q8NFV5 336 aaPredicted RBP13.01□□□□□ -0.33
RBM23-208ENST00000553876 CLEC11AQ9Y240 323 aa12.97□□□□□ -0.33
RBM23-208ENST00000553876 FXR2P51116 673 aaKnown RBP eCLIP12.89□□□□□ -0.35
RBM23-208ENST00000553876 PIP4P2Q8N4L2 257 aa12.89□□□□□ -0.35
RBM23-208ENST00000553876 POTEHQ6S545 545 aa12.86□□□□□ -0.35
RBM23-208ENST00000553876 PRR29P0C7W0 189 aa12.81□□□□□ -0.36
RBM23-208ENST00000553876 STAG3Q9UJ98 1225 aa12.8□□□□□ -0.36
RBM23-208ENST00000553876 CHADLQ6NUI6 762 aa12.75□□□□□ -0.37
RBM23-208ENST00000553876 PRKAR2AP13861 404 aaKnown RBP12.74□□□□□ -0.37
RBM23-208ENST00000553876 CREBZFQ9NS37 354 aa12.71□□□□□ -0.37
RBM23-208ENST00000553876 MNX1P50219 401 aaPredicted RBP12.59□□□□□ -0.39
RBM23-208ENST00000553876 FBXO3Q9UK99 471 aa12.59□□□□□ -0.39
RBM23-208ENST00000553876 FARP1Q9Y4F1 1045 aaPredicted RBP12.57□□□□□ -0.4
RBM23-208ENST00000553876 VASPP50552 380 aaPredicted RBP12.53□□□□□ -0.4
RBM23-208ENST00000553876 MIER1Q8N108 512 aa12.51□□□□□ -0.41
RBM23-208ENST00000553876 PLCD3Q8N3E9 789 aa12.48□□□□□ -0.41
RBM23-208ENST00000553876 EVX2Q03828 476 aa12.46□□□□□ -0.41
RBM23-208ENST00000553876 C19orf67A6NJJ6 358 aa12.45□□□□□ -0.42
RBM23-208ENST00000553876 HAX1O00165 279 aa12.45□□□□□ -0.42
RBM23-208ENST00000553876 PLEKHG5O94827 1062 aa12.38□□□□□ -0.43
RBM23-208ENST00000553876 CD44P16070 742 aaKnown RBP12.37□□□□□ -0.43
RBM23-208ENST00000553876 IFNLR1Q8IU57 520 aaPredicted RBP12.37□□□□□ -0.43
RBM23-208ENST00000553876 NPM1P06748 294 aaKnown RBP eCLIP12.35□□□□□ -0.43
RBM23-208ENST00000553876 RASEFQ8IZ41 740 aa12.32□□□□□ -0.44
RBM23-208ENST00000553876 NUBP1P53384 320 aa12.31□□□□□ -0.44
RBM23-208ENST00000553876 ZBTB47Q9UFB7 747 aaPredicted RBP12.31□□□□□ -0.44
RBM23-208ENST00000553876 SP7Q8TDD2 431 aaPredicted RBP12.29□□□□□ -0.44
RBM23-208ENST00000553876 ZRANB1Q9UGI0 708 aa12.26□□□□□ -0.45
RBM23-208ENST00000553876 KLHL34Q8N239 644 aa12.25□□□□□ -0.45
RBM23-208ENST00000553876 ZNF579Q8NAF0 562 aaKnown RBP12.23□□□□□ -0.45
RBM23-208ENST00000553876 TSPYL2Q9H2G4 693 aaPredicted RBP12.23□□□□□ -0.45
RBM23-208ENST00000553876 PHF12Q96QT6 1004 aa12.2□□□□□ -0.46
RBM23-208ENST00000553876 CCDC61Q9Y6R9 512 aa12.2□□□□□ -0.46
RBM23-208ENST00000553876 PAK3O75914 559 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms