RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 SRIP30626 198 aa10.3□□□□□ -0.76
HCFC2-202ENST00000544223 LINC00310P59036 64 aa10.3□□□□□ -0.76
HCFC2-202ENST00000544223 ZNF124Q15973 351 aa10.3□□□□□ -0.76
HCFC2-202ENST00000544223 TMEM78Q5T7P6 136 aa10.3□□□□□ -0.76
HCFC2-202ENST00000544223 LINC01006Q8NI28 216 aa10.3□□□□□ -0.76
HCFC2-202ENST00000544223 RCHY1Q96PM5 261 aa10.3□□□□□ -0.76
HCFC2-202ENST00000544223 GNB1LQ9BYB4 327 aa10.3□□□□□ -0.76
HCFC2-202ENST00000544223 TRBV6-1A0A0K0K1D8 114 aa10.3□□□□□ -0.76
HCFC2-202ENST00000544223 TMEM189A5PLL7 270 aa10.3□□□□□ -0.76
HCFC2-202ENST00000544223 C2orf70A6NJV1 201 aa10.3□□□□□ -0.76
HCFC2-202ENST00000544223 M0QZ24 198 aa10.3□□□□□ -0.76
HCFC2-202ENST00000544223 DCANP1Q8TF63 244 aa10.3□□□□□ -0.76
HCFC2-202ENST00000544223 CITED2Q99967 270 aaPredicted RBP10.3□□□□□ -0.76
HCFC2-202ENST00000544223 APCSP02743 223 aa10.29□□□□□ -0.76
HCFC2-202ENST00000544223 PSMG4Q5JS54 123 aa10.29□□□□□ -0.76
HCFC2-202ENST00000544223 LYZL1Q6UWQ5 148 aa10.29□□□□□ -0.76
HCFC2-202ENST00000544223 RBPMS2Q6ZRY4 209 aaKnown RBP10.29□□□□□ -0.76
HCFC2-202ENST00000544223 RNF152Q8N8N0 203 aa10.29□□□□□ -0.76
HCFC2-202ENST00000544223 HIST1H2BLQ99880 126 aa10.29□□□□□ -0.76
HCFC2-202ENST00000544223 MSRB1Q9NZV6 116 aa10.29□□□□□ -0.76
HCFC2-202ENST00000544223 NAGKQ9UJ70 344 aa10.29□□□□□ -0.76
HCFC2-202ENST00000544223 UFC1Q9Y3C8 167 aa10.29□□□□□ -0.76
HCFC2-202ENST00000544223 ZNF138P52744 262 aa10.29□□□□□ -0.76
HCFC2-202ENST00000544223 SAPCD1Q5SSQ6 148 aa10.29□□□□□ -0.76
HCFC2-202ENST00000544223 TIMM8BQ9Y5J9 83 aaPredicted RBP10.29□□□□□ -0.76
HCFC2-202ENST00000544223 TMEM89A2RUT3 159 aa10.28□□□□□ -0.76
HCFC2-202ENST00000544223 CRISP2P16562 243 aa10.28□□□□□ -0.76
HCFC2-202ENST00000544223 KLF5Q13887 457 aaPredicted RBP10.28□□□□□ -0.76
HCFC2-202ENST00000544223 OR1N2Q8NGR9 330 aa10.28□□□□□ -0.76
HCFC2-202ENST00000544223 TRAV9-1A0A075B6T8 112 aa10.28□□□□□ -0.76
HCFC2-202ENST00000544223 A0A1B0GXF2 115 aa10.28□□□□□ -0.76
HCFC2-202ENST00000544223 SERF1AO75920 110 aa10.28□□□□□ -0.76
HCFC2-202ENST00000544223 AMBPP02760 352 aa10.28□□□□□ -0.76
HCFC2-202ENST00000544223 S100A2P29034 98 aa10.28□□□□□ -0.76
HCFC2-202ENST00000544223 RAX2Q96IS3 184 aa10.28□□□□□ -0.76
HCFC2-202ENST00000544223 IGKV3D-20A0A0C4DH25 116 aa10.27□□□□□ -0.77
HCFC2-202ENST00000544223 K7EMT4 169 aa10.27□□□□□ -0.77
HCFC2-202ENST00000544223 S100A8P05109 93 aa10.27□□□□□ -0.77
HCFC2-202ENST00000544223 SMIM6P0DI80 62 aa10.27□□□□□ -0.77
HCFC2-202ENST00000544223 HBBP68871 147 aa10.27□□□□□ -0.77
HCFC2-202ENST00000544223 TMEM86BQ8N661 226 aa10.27□□□□□ -0.77
HCFC2-202ENST00000544223 DPF1Q92782 380 aa10.27□□□□□ -0.77
HCFC2-202ENST00000544223 SERTM2A0A1B0GWG4 89 aa10.27□□□□□ -0.77
HCFC2-202ENST00000544223 LINC01619G3V211 115 aa10.27□□□□□ -0.77
HCFC2-202ENST00000544223 NDFIP1Q9BT67 221 aa10.27□□□□□ -0.77
HCFC2-202ENST00000544223 RNASE4P34096 147 aaKnown RBP10.26□□□□□ -0.77
HCFC2-202ENST00000544223 C9orf47Q6ZRZ4 202 aa10.26□□□□□ -0.77
HCFC2-202ENST00000544223 BAGE3Q86Y29 109 aa10.26□□□□□ -0.77
HCFC2-202ENST00000544223 NBEAL2Q6ZNJ1 2754 aa10.26□□□□□ -0.77
HCFC2-202ENST00000544223 TRAV12-2A0A075B6T6 113 aa10.26□□□□□ -0.77
HCFC2-202ENST00000544223 RNASE1P07998 156 aaKnown RBP10.26□□□□□ -0.77
HCFC2-202ENST00000544223 CT83Q5H943 113 aa10.26□□□□□ -0.77
HCFC2-202ENST00000544223 PYY3Q5JQD4 70 aa10.26□□□□□ -0.77
HCFC2-202ENST00000544223 OR8A1Q8NGG7 326 aa10.26□□□□□ -0.77
HCFC2-202ENST00000544223 OR10J6PQ8NGY7 276 aa10.26□□□□□ -0.77
HCFC2-202ENST00000544223 C4orf3Q8WVX3 66 aa10.26□□□□□ -0.77
HCFC2-202ENST00000544223 PACRGQ96M98 296 aaPredicted RBP10.26□□□□□ -0.77
HCFC2-202ENST00000544223 WDR73Q6P4I2 378 aa10.25□□□□□ -0.77
HCFC2-202ENST00000544223 FBN1P35555 2871 aaKnown RBP10.25□□□□□ -0.77
HCFC2-202ENST00000544223 RBAKDNA6NC62 111 aa10.25□□□□□ -0.77
HCFC2-202ENST00000544223 FABP5P3A8MUU1 101 aa10.25□□□□□ -0.77
HCFC2-202ENST00000544223 A8MWP6 167 aa10.25□□□□□ -0.77
HCFC2-202ENST00000544223 HLA-DQA1P01909 254 aa10.25□□□□□ -0.77
HCFC2-202ENST00000544223 FXYD7P58549 80 aa10.25□□□□□ -0.77
HCFC2-202ENST00000544223 HILS1P60008 231 aa10.25□□□□□ -0.77
HCFC2-202ENST00000544223 FAM19A2Q8N3H0 131 aa10.25□□□□□ -0.77
HCFC2-202ENST00000544223 ZFAND2AQ8N6M9 145 aa10.25□□□□□ -0.77
HCFC2-202ENST00000544223 OR4B1Q8NGF8 309 aa10.25□□□□□ -0.77
HCFC2-202ENST00000544223 A0A1B0GUT8 65 aa10.24□□□□□ -0.77
HCFC2-202ENST00000544223 M0R2Z0 102 aa10.24□□□□□ -0.77
HCFC2-202ENST00000544223 NSUN5P1Q3KNT7 163 aa10.24□□□□□ -0.77
HCFC2-202ENST00000544223 ZNF418Q8TF45 676 aaPredicted RBP10.24□□□□□ -0.77
HCFC2-202ENST00000544223 PMCHL1Q16048 86 aa10.24□□□□□ -0.77
HCFC2-202ENST00000544223 TMEM61Q8N0U2 210 aa10.24□□□□□ -0.77
HCFC2-202ENST00000544223 OR9G4Q8NGQ1 327 aa10.24□□□□□ -0.77
HCFC2-202ENST00000544223 GFRA4Q9GZZ7 299 aa10.24□□□□□ -0.77
HCFC2-202ENST00000544223 GAS8-AS1O95177 125 aa10.23□□□□□ -0.77
HCFC2-202ENST00000544223 GPX1P07203 203 aa10.23□□□□□ -0.77
HCFC2-202ENST00000544223 NTF3P20783 257 aa10.23□□□□□ -0.77
HCFC2-202ENST00000544223 REC114Q7Z4M0 266 aa10.23□□□□□ -0.77
HCFC2-202ENST00000544223 TEX29Q8N6K0 151 aa10.23□□□□□ -0.77
HCFC2-202ENST00000544223 PKD1L1Q8TDX9 2849 aa10.23□□□□□ -0.77
HCFC2-202ENST00000544223 KNCNA6PVL3 124 aa10.23□□□□□ -0.77
HCFC2-202ENST00000544223 SMKR1H3BMG3 65 aa10.23□□□□□ -0.77
HCFC2-202ENST00000544223 KRTAP10-3P60369 221 aa10.23□□□□□ -0.77
HCFC2-202ENST00000544223 TWIST1Q15672 202 aa10.23□□□□□ -0.77
HCFC2-202ENST00000544223 AMN1Q8IY45 258 aa10.23□□□□□ -0.77
HCFC2-202ENST00000544223 FER1L6-AS1Q8NA97 138 aa10.23□□□□□ -0.77
HCFC2-202ENST00000544223 C18orf32Q8TCD1 76 aa10.23□□□□□ -0.77
HCFC2-202ENST00000544223 RNF114Q9Y508 228 aa10.23□□□□□ -0.77
HCFC2-202ENST00000544223 LGALS9O00182 355 aa10.22□□□□□ -0.77
HCFC2-202ENST00000544223 PRM2P04554 102 aa10.22□□□□□ -0.77
HCFC2-202ENST00000544223 CSN3P07498 182 aa10.22□□□□□ -0.77
HCFC2-202ENST00000544223 BMI1P35226 326 aa10.22□□□□□ -0.77
HCFC2-202ENST00000544223 COX8CQ7Z4L0 72 aa10.22□□□□□ -0.77
HCFC2-202ENST00000544223 OR10AG1Q8NH19 301 aa10.22□□□□□ -0.77
HCFC2-202ENST00000544223 K7EQG2 157 aa10.22□□□□□ -0.77
HCFC2-202ENST00000544223 GNRH2O43555 120 aa10.22□□□□□ -0.77
HCFC2-202ENST00000544223 MT-ND6P03923 174 aa10.22□□□□□ -0.77
HCFC2-202ENST00000544223 PMCHP20382 165 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms