RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 SS18Q15532 418 aa1.62□□□□□ -2.15
SVIP-203ENST00000529848 VMA21Q3ZAQ7 101 aa1.62□□□□□ -2.15
SVIP-203ENST00000529848 Q6Q795 121 aa1.62□□□□□ -2.15
SVIP-203ENST00000529848 PRR15Q8IV56 129 aa1.62□□□□□ -2.15
SVIP-203ENST00000529848 DCANP1Q8TF63 244 aa1.62□□□□□ -2.15
SVIP-203ENST00000529848 BORCS8Q96FH0 119 aa1.62□□□□□ -2.15
SVIP-203ENST00000529848 GPX7Q96SL4 187 aaPredicted RBP1.62□□□□□ -2.15
SVIP-203ENST00000529848 SLC25A21Q9BQT8 299 aaPredicted RBP1.62□□□□□ -2.15
SVIP-203ENST00000529848 TMEM70Q9BUB7 260 aa1.62□□□□□ -2.15
SVIP-203ENST00000529848 C11orf68Q9H3H3 251 aaKnown RBP1.62□□□□□ -2.15
SVIP-203ENST00000529848 TP73-AS1Q9UF72 201 aa1.62□□□□□ -2.15
SVIP-203ENST00000529848 SOX21Q9Y651 276 aaPredicted RBP1.62□□□□□ -2.15
SVIP-203ENST00000529848 A0A0G2JMZ2 1700 aa1.62□□□□□ -2.15
SVIP-203ENST00000529848 PLXNA1Q9UIW2 1896 aa1.62□□□□□ -2.15
SVIP-203ENST00000529848 TTC28Q96AY4 2481 aa1.62□□□□□ -2.15
SVIP-203ENST00000529848 RANBP2P49792 3224 aaKnown RBP1.62□□□□□ -2.15
SVIP-203ENST00000529848 CHD3Q12873 2000 aaKnown RBP1.61□□□□□ -2.15
SVIP-203ENST00000529848 UNC80Q8N2C7 3258 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 IGHV3-15A0A0B4J1V0 119 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 IGKV1D-43A0A0B4J1Z2 117 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 TRAV41A0A0B4J266 112 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 A8MUN3 132 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 LST1O00453 97 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 PIRO00625 290 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 CD14P08571 375 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 SMIM10L2AP0DMW4 78 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 SMIM10L2BP0DMW5 78 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 ETV6P41212 452 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 XCL1P47992 114 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 ARPP19P56211 112 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 RTL8BQ17RB0 113 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 C6orf52Q5T4I8 152 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 LYRM7Q5U5X0 104 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 LCN15Q6UWW0 184 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 GTF2H5Q6ZYL4 71 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 KTN1-AS1Q86SY8 53 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 TTC9CQ8N5M4 171 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 OR4X2Q8NGF9 303 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 OR5D14Q8NGL3 314 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 SGMS2Q8NHU3 365 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 NMNAT3Q96T66 252 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 Q9BRP9 147 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 RTL8AQ9BWD3 113 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 ZNF471Q9BX82 626 aaPredicted RBP1.61□□□□□ -2.15
SVIP-203ENST00000529848 CXCL16Q9H2A7 254 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 SAR1AQ9NR31 198 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 RNF11Q9Y3C5 154 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 IER3IP1Q9Y5U9 82 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 SPTBN5Q9NRC6 3674 aaKnown RBP1.61□□□□□ -2.15
SVIP-203ENST00000529848 BAHCC1Q9P281 2608 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 ZNF236Q9UL36 1845 aa1.61□□□□□ -2.15
SVIP-203ENST00000529848 NYNRINQ9P2P1 1898 aaKnown RBP1.6□□□□□ -2.15
SVIP-203ENST00000529848 MUC6Q6W4X9 2439 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 PNMA8CA0A1B0GUJ8 204 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 MDFIC2A0A1B0GVS7 189 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 ODAMA1E959 279 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 J3QR89 54 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 M0R129 80 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 CDC42EP2O14613 210 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 APOMO95445 188 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 NCR2O95944 276 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 TRGC2P03986 189 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 SPINK8P0C7L1 97 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 IGLC1P0CG04 106 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 PPIBP23284 216 aaKnown RBP1.6□□□□□ -2.15
SVIP-203ENST00000529848 PSMB8P28062 276 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 RPL27AP46776 148 aaKnown RBP1.6□□□□□ -2.15
SVIP-203ENST00000529848 AQP4P55087 323 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 TPPP2P59282 170 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 KRTAP12-1P59990 96 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 RPL26P61254 145 aaKnown RBP1.6□□□□□ -2.15
SVIP-203ENST00000529848 UBA52P62987 128 aaKnown RBP1.6□□□□□ -2.15
SVIP-203ENST00000529848 GNGT1P63211 74 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 MYL5Q02045 173 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 HES1Q14469 280 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 KRTAP5-7Q6L8G8 165 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 Q6ZS49 121 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 ZNF720Q7Z2F6 126 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 SPATA12Q7Z6I5 190 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 TRAPPC6BQ86SZ2 158 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 RPP25LQ8N5L8 163 aaKnown RBP1.6□□□□□ -2.15
SVIP-203ENST00000529848 PPTC7Q8NI37 304 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 DPH3Q96FX2 82 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 AP1S3Q96PC3 154 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 MRPL32Q9BYC8 188 aaKnown RBP1.6□□□□□ -2.15
SVIP-203ENST00000529848 WDR61Q9GZS3 305 aaKnown RBP1.6□□□□□ -2.15
SVIP-203ENST00000529848 TMEM191AQ9H0A3 160 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 RPRMQ9NS64 109 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 FBXL12Q9NXK8 326 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 FAM215AQ9Y5M1 114 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 COL11A1P12107 1806 aaPredicted RBP1.6□□□□□ -2.15
SVIP-203ENST00000529848 COL4A2P08572 1712 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 MYH4Q9Y623 1939 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 CACNA1AO00555 2505 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 PIEZO1Q92508 2521 aa1.6□□□□□ -2.15
SVIP-203ENST00000529848 VCANP13611 3396 aa1.59□□□□□ -2.15
SVIP-203ENST00000529848 NCOR1O75376 2440 aa1.59□□□□□ -2.15
SVIP-203ENST00000529848 TANC1Q9C0D5 1861 aa1.59□□□□□ -2.15
SVIP-203ENST00000529848 A0A087X0T9 212 aa1.59□□□□□ -2.15
SVIP-203ENST00000529848 IGHV1-69-2A0A0G2JMI3 117 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms