RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 TCRAP04437 139 aa1.07□□□□□ -2.24
BRCA2-203ENST00000528762 DIAPH2-AS1Q14236 149 aa1.07□□□□□ -2.24
BRCA2-203ENST00000528762 CASC2Q6XLA1 102 aa1.07□□□□□ -2.24
BRCA2-203ENST00000528762 TCTE3Q8IZS6 198 aa1.07□□□□□ -2.24
BRCA2-203ENST00000528762 OR51A4Q8NGJ6 313 aa1.07□□□□□ -2.24
BRCA2-203ENST00000528762 HSPB8Q9UJY1 196 aa1.07□□□□□ -2.24
BRCA2-203ENST00000528762 C22orf24Q9Y442 160 aa1.07□□□□□ -2.24
BRCA2-203ENST00000528762 MED12Q93074 2177 aa1.07□□□□□ -2.24
BRCA2-203ENST00000528762 COL1A1P02452 1464 aaPredicted RBP1.06□□□□□ -2.24
BRCA2-203ENST00000528762 LOC107986453A0A1B0GWG9 222 aa1.06□□□□□ -2.24
BRCA2-203ENST00000528762 PPYP01298 95 aa1.06□□□□□ -2.24
BRCA2-203ENST00000528762 TRACP01848 142 aa1.06□□□□□ -2.24
BRCA2-203ENST00000528762 MPC1LP0DKB6 136 aa1.06□□□□□ -2.24
BRCA2-203ENST00000528762 CMPK1P30085 196 aa1.06□□□□□ -2.24
BRCA2-203ENST00000528762 BLCAPP62952 87 aa1.06□□□□□ -2.24
BRCA2-203ENST00000528762 PSPHP78330 225 aa1.06□□□□□ -2.24
BRCA2-203ENST00000528762 HIST1H1AQ02539 215 aaPredicted RBP1.06□□□□□ -2.24
BRCA2-203ENST00000528762 TNFSF18Q9UNG2 199 aa1.06□□□□□ -2.24
BRCA2-203ENST00000528762 KMT2BQ9UMN6 2715 aaPredicted RBP1.06□□□□□ -2.24
BRCA2-203ENST00000528762 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.05□□□□□ -2.24
BRCA2-203ENST00000528762 A6NN06 94 aa1.05□□□□□ -2.24
BRCA2-203ENST00000528762 PAEPP09466 180 aa1.05□□□□□ -2.24
BRCA2-203ENST00000528762 SMCO1Q147U7 214 aa1.05□□□□□ -2.24
BRCA2-203ENST00000528762 SMIM21Q3B7S5 101 aa1.05□□□□□ -2.24
BRCA2-203ENST00000528762 TMEM91Q6ZNR0 172 aa1.05□□□□□ -2.24
BRCA2-203ENST00000528762 OR4S1Q8NGB4 309 aa1.05□□□□□ -2.24
BRCA2-203ENST00000528762 DNAJC15Q9Y5T4 150 aa1.05□□□□□ -2.24
BRCA2-203ENST00000528762 ZDBF2Q9HCK1 2354 aa1.04□□□□□ -2.24
BRCA2-203ENST00000528762 C3orf85A0A1B0GTC6 90 aa1.04□□□□□ -2.24
BRCA2-203ENST00000528762 JMJD7-PLA2G4BH0Y9G9 81 aa1.04□□□□□ -2.24
BRCA2-203ENST00000528762 CD14P08571 375 aa1.04□□□□□ -2.24
BRCA2-203ENST00000528762 AKR1D1P51857 326 aa1.04□□□□□ -2.24
BRCA2-203ENST00000528762 LSM3P62310 102 aaKnown RBP1.04□□□□□ -2.24
BRCA2-203ENST00000528762 ASB16-AS1Q495Z4 193 aa1.04□□□□□ -2.24
BRCA2-203ENST00000528762 GLYATL3Q5SZD4 288 aa1.04□□□□□ -2.24
BRCA2-203ENST00000528762 GLIPR1L1Q6UWM5 242 aa1.04□□□□□ -2.24
BRCA2-203ENST00000528762 AP1S3Q96PC3 154 aa1.04□□□□□ -2.24
BRCA2-203ENST00000528762 MPC1Q9Y5U8 109 aa1.04□□□□□ -2.24
BRCA2-203ENST00000528762 CITO14578 2027 aa1.04□□□□□ -2.24
BRCA2-203ENST00000528762 ARHGAP31Q2M1Z3 1444 aa1.04□□□□□ -2.24
BRCA2-203ENST00000528762 ZCCHC6Q5VYS8 1495 aaKnown RBP1.04□□□□□ -2.24
BRCA2-203ENST00000528762 KLF7O75840 302 aaPredicted RBP1.03□□□□□ -2.24
BRCA2-203ENST00000528762 HMGN1P05114 100 aa1.03□□□□□ -2.24
BRCA2-203ENST00000528762 TSPAN19P0C672 248 aa1.03□□□□□ -2.24
BRCA2-203ENST00000528762 EVI2AP22794 236 aa1.03□□□□□ -2.24
BRCA2-203ENST00000528762 KRTAP10-4P60372 401 aaPredicted RBP1.03□□□□□ -2.24
BRCA2-203ENST00000528762 HSD17B12Q53GQ0 312 aa1.03□□□□□ -2.24
BRCA2-203ENST00000528762 IZUMO2Q6UXV1 221 aa1.03□□□□□ -2.24
BRCA2-203ENST00000528762 LINC00299Q6ZSB3 139 aa1.03□□□□□ -2.24
BRCA2-203ENST00000528762 OR8J3Q8NGG0 315 aa1.03□□□□□ -2.24
BRCA2-203ENST00000528762 ATG2AQ2TAZ0 1938 aa1.03□□□□□ -2.25
BRCA2-203ENST00000528762 A0A0J9YY99 117 aa1.02□□□□□ -2.25
BRCA2-203ENST00000528762 NDUFA2O43678 99 aa1.02□□□□□ -2.25
BRCA2-203ENST00000528762 CD3DP04234 171 aa1.02□□□□□ -2.25
BRCA2-203ENST00000528762 HLA-DRB4P13762 266 aa1.02□□□□□ -2.25
BRCA2-203ENST00000528762 ETV6P41212 452 aa1.02□□□□□ -2.25
BRCA2-203ENST00000528762 ABCA4P78363 2273 aa1.02□□□□□ -2.25
BRCA2-203ENST00000528762 KIAA0100Q14667 2235 aaKnown RBP1.02□□□□□ -2.25
BRCA2-203ENST00000528762 NEDD8Q15843 81 aa1.02□□□□□ -2.25
BRCA2-203ENST00000528762 FGD6Q6ZV73 1430 aa1.02□□□□□ -2.25
BRCA2-203ENST00000528762 OTOSQ8NHW6 89 aa1.02□□□□□ -2.25
BRCA2-203ENST00000528762 CIB3Q96Q77 187 aaPredicted RBP1.02□□□□□ -2.25
BRCA2-203ENST00000528762 AMELYQ99218 206 aa1.02□□□□□ -2.25
BRCA2-203ENST00000528762 WFDC10AQ9H1F0 79 aa1.02□□□□□ -2.25
BRCA2-203ENST00000528762 CALML5Q9NZT1 146 aa1.02□□□□□ -2.25
BRCA2-203ENST00000528762 METTL1Q9UBP6 276 aaKnown RBP1.02□□□□□ -2.25
BRCA2-203ENST00000528762 KIDINS220Q9ULH0 1771 aa1.02□□□□□ -2.25
BRCA2-203ENST00000528762 HLA-DRB4X5D2U9 266 aa1.02□□□□□ -2.25
BRCA2-203ENST00000528762 CTTNBP2Q8WZ74 1663 aa1.01□□□□□ -2.25
BRCA2-203ENST00000528762 SYNJ1O43426 1573 aa1.01□□□□□ -2.25
BRCA2-203ENST00000528762 BICRAQ9NZM4 1560 aa1.01□□□□□ -2.25
BRCA2-203ENST00000528762 OVOS2A0A0J9YW53 1432 aa1.01□□□□□ -2.25
BRCA2-203ENST00000528762 OVOS2Q6IE36 1432 aa1.01□□□□□ -2.25
BRCA2-203ENST00000528762 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.01□□□□□ -2.25
BRCA2-203ENST00000528762 EDF1O60869 148 aaKnown RBP1.01□□□□□ -2.25
BRCA2-203ENST00000528762 IGLV3-1P01715 115 aa1.01□□□□□ -2.25
BRCA2-203ENST00000528762 IGLC6P0CF74 106 aa1.01□□□□□ -2.25
BRCA2-203ENST00000528762 SNRPD3P62318 126 aaKnown RBP1.01□□□□□ -2.25
BRCA2-203ENST00000528762 CCSMST1Q4G0I0 132 aa1.01□□□□□ -2.25
BRCA2-203ENST00000528762 LZICQ8WZA0 190 aa1.01□□□□□ -2.25
BRCA2-203ENST00000528762 LIMD2Q9BT23 127 aa1.01□□□□□ -2.25
BRCA2-203ENST00000528762 SPAG17Q6Q759 2223 aa1□□□□□ -2.25
BRCA2-203ENST00000528762 PRG4Q92954 1404 aaPredicted RBP1□□□□□ -2.25
BRCA2-203ENST00000528762 TRAV23DV6A0A075B6W5 121 aa1□□□□□ -2.25
BRCA2-203ENST00000528762 PNMA8CA0A1B0GUJ8 204 aa1□□□□□ -2.25
BRCA2-203ENST00000528762 NCR3O14931 201 aa1□□□□□ -2.25
BRCA2-203ENST00000528762 SULT1C4O75897 302 aa1□□□□□ -2.25
BRCA2-203ENST00000528762 LINC00694P0DN24 101 aa1□□□□□ -2.25
BRCA2-203ENST00000528762 KDELR1P24390 212 aa1□□□□□ -2.25
BRCA2-203ENST00000528762 MAGOHBQ96A72 148 aaKnown RBP1□□□□□ -2.25
BRCA2-203ENST00000528762 LPAR5Q9H1C0 372 aa1□□□□□ -2.25
BRCA2-203ENST00000528762 BANF2Q9H503 90 aa1□□□□□ -2.25
BRCA2-203ENST00000528762 COMMD3Q9UBI1 195 aa1□□□□□ -2.25
BRCA2-203ENST00000528762 PLXNA2O75051 1894 aa1□□□□□ -2.25
BRCA2-203ENST00000528762 LAMA4Q16363 1823 aa1□□□□□ -2.25
BRCA2-203ENST00000528762 CNTRLQ7Z7A1 2325 aa1□□□□□ -2.25
BRCA2-203ENST00000528762 CASZ1Q86V15 1759 aa0.99□□□□□ -2.25
BRCA2-203ENST00000528762 IFITM5A6NNB3 132 aa0.99□□□□□ -2.25
BRCA2-203ENST00000528762 BBIP1A8MTZ0 92 aa0.99□□□□□ -2.25
BRCA2-203ENST00000528762 HIST1H1BP16401 226 aaKnown RBP0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms