RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 NDUFS8O00217 210 aa10.01□□□□□ -0.81
TRAPPC9-208ENST00000520857 SCGB1C2P0DMR2 95 aa10.01□□□□□ -0.81
TRAPPC9-208ENST00000520857 FOXI2Q6ZQN5 318 aa10.01□□□□□ -0.81
TRAPPC9-208ENST00000520857 U3KQK5 164 aa10.01□□□□□ -0.81
TRAPPC9-208ENST00000520857 WI2-2373I1.2A0A1W2PRP0 233 aa10□□□□□ -0.81
TRAPPC9-208ENST00000520857 E7EQL1 145 aa10□□□□□ -0.81
TRAPPC9-208ENST00000520857 TRGV3P03979 118 aa10□□□□□ -0.81
TRAPPC9-208ENST00000520857 HOXB4P17483 251 aaPredicted RBP10□□□□□ -0.81
TRAPPC9-208ENST00000520857 PSMB2P49721 201 aa10□□□□□ -0.81
TRAPPC9-208ENST00000520857 C3orf36Q3SXR2 165 aa10□□□□□ -0.81
TRAPPC9-208ENST00000520857 SMPXQ9UHP9 88 aa10□□□□□ -0.81
TRAPPC9-208ENST00000520857 PRAC2D3DTV9 90 aa10□□□□□ -0.81
TRAPPC9-208ENST00000520857 F8W1H4 67 aa10□□□□□ -0.81
TRAPPC9-208ENST00000520857 CEACAM4O75871 244 aa10□□□□□ -0.81
TRAPPC9-208ENST00000520857 CRYGBP07316 175 aa10□□□□□ -0.81
TRAPPC9-208ENST00000520857 PSMG4Q5JS54 123 aa10□□□□□ -0.81
TRAPPC9-208ENST00000520857 MAPKAPK5-AS1Q8N8E1 139 aa10□□□□□ -0.81
TRAPPC9-208ENST00000520857 PGPEP1Q9NXJ5 209 aa10□□□□□ -0.81
TRAPPC9-208ENST00000520857 RAXQ9Y2V3 346 aa10□□□□□ -0.81
TRAPPC9-208ENST00000520857 CLEC3BP05452 202 aa9.99□□□□□ -0.81
TRAPPC9-208ENST00000520857 C5orf64Q2M2E5 130 aa9.99□□□□□ -0.81
TRAPPC9-208ENST00000520857 SPAG8Q99932 426 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC9-208ENST00000520857 HOXA3O43365 443 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC9-208ENST00000520857 Q8N8P6 123 aa9.99□□□□□ -0.81
TRAPPC9-208ENST00000520857 LINC01560Q8TB33 94 aa9.99□□□□□ -0.81
TRAPPC9-208ENST00000520857 ATP6V0BQ99437 205 aa9.99□□□□□ -0.81
TRAPPC9-208ENST00000520857 CHTOPQ9Y3Y2 248 aaKnown RBP9.99□□□□□ -0.81
TRAPPC9-208ENST00000520857 KALRNO60229 2985 aa9.99□□□□□ -0.81
TRAPPC9-208ENST00000520857 FAM90A27PA6NNH2 459 aa9.98□□□□□ -0.81
TRAPPC9-208ENST00000520857 RAB9AP51151 201 aa9.98□□□□□ -0.81
TRAPPC9-208ENST00000520857 CFHR4Q92496 578 aa9.98□□□□□ -0.81
TRAPPC9-208ENST00000520857 HIGD1BQ9P298 99 aa9.98□□□□□ -0.81
TRAPPC9-208ENST00000520857 HHLA3Q9XRX5 114 aa9.98□□□□□ -0.81
TRAPPC9-208ENST00000520857 SRSF1Q07955 248 aaKnown RBP eCLIP9.98□□□□□ -0.81
TRAPPC9-208ENST00000520857 PLA2G2CQ5R387 149 aa9.98□□□□□ -0.81
TRAPPC9-208ENST00000520857 NOTCH3Q9UM47 2321 aa9.98□□□□□ -0.81
TRAPPC9-208ENST00000520857 THBDP07204 575 aa9.98□□□□□ -0.81
TRAPPC9-208ENST00000520857 INSL3P51460 131 aa9.98□□□□□ -0.81
TRAPPC9-208ENST00000520857 EMP1P54849 157 aa9.98□□□□□ -0.81
TRAPPC9-208ENST00000520857 RNF185Q96GF1 192 aa9.98□□□□□ -0.81
TRAPPC9-208ENST00000520857 TIMD4Q96H15 378 aa9.98□□□□□ -0.81
TRAPPC9-208ENST00000520857 KAAG1Q9UBP8 84 aa9.98□□□□□ -0.81
TRAPPC9-208ENST00000520857 CUL9Q8IWT3 2517 aa9.98□□□□□ -0.81
TRAPPC9-208ENST00000520857 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC9-208ENST00000520857 SPANXB1Q9NS25 103 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC9-208ENST00000520857 ZNF815PA8K554 130 aa9.97□□□□□ -0.81
TRAPPC9-208ENST00000520857 GATD1Q8NB37 220 aa9.97□□□□□ -0.81
TRAPPC9-208ENST00000520857 CEP295Q9C0D2 2601 aa9.97□□□□□ -0.81
TRAPPC9-208ENST00000520857 IGLC6P0CF74 106 aa9.97□□□□□ -0.81
TRAPPC9-208ENST00000520857 CLEC19AQ6UXS0 136 aa9.97□□□□□ -0.81
TRAPPC9-208ENST00000520857 H7C2G1 150 aa9.96□□□□□ -0.81
TRAPPC9-208ENST00000520857 Q6ZS92 163 aa9.96□□□□□ -0.81
TRAPPC9-208ENST00000520857 CFAP47Q6ZTR5 3102 aa9.96□□□□□ -0.81
TRAPPC9-208ENST00000520857 RRN3P1Q2M238 152 aa9.96□□□□□ -0.81
TRAPPC9-208ENST00000520857 C15orf32Q32M92 178 aa9.96□□□□□ -0.81
TRAPPC9-208ENST00000520857 SYT8Q8NBV8 401 aa9.96□□□□□ -0.81
TRAPPC9-208ENST00000520857 C16orf92Q96LL3 132 aa9.96□□□□□ -0.81
TRAPPC9-208ENST00000520857 E9PLD3 99 aa9.96□□□□□ -0.82
TRAPPC9-208ENST00000520857 OVOL3O00110 214 aa9.96□□□□□ -0.82
TRAPPC9-208ENST00000520857 FANCD2OSQ96PS1 177 aa9.96□□□□□ -0.82
TRAPPC9-208ENST00000520857 C20orf78Q9BR46 151 aa9.96□□□□□ -0.82
TRAPPC9-208ENST00000520857 TMEM238LA0A1B0GVL6 79 aa9.95□□□□□ -0.82
TRAPPC9-208ENST00000520857 LINC01549A6NIU2 74 aa9.95□□□□□ -0.82
TRAPPC9-208ENST00000520857 A6NJY4 79 aa9.95□□□□□ -0.82
TRAPPC9-208ENST00000520857 B9A039 149 aa9.95□□□□□ -0.82
TRAPPC9-208ENST00000520857 PLNP26678 52 aa9.95□□□□□ -0.82
TRAPPC9-208ENST00000520857 RNF5Q99942 180 aa9.95□□□□□ -0.82
TRAPPC9-208ENST00000520857 SPG11Q96JI7 2443 aa9.95□□□□□ -0.82
TRAPPC9-208ENST00000520857 H7C1H1 209 aa9.95□□□□□ -0.82
TRAPPC9-208ENST00000520857 MRPS12O15235 138 aaKnown RBP9.95□□□□□ -0.82
TRAPPC9-208ENST00000520857 NDPQ00604 133 aa9.95□□□□□ -0.82
TRAPPC9-208ENST00000520857 TM2D2Q9BX73 214 aa9.95□□□□□ -0.82
TRAPPC9-208ENST00000520857 PHLDA3Q9Y5J5 127 aa9.95□□□□□ -0.82
TRAPPC9-208ENST00000520857 A0A087WX48 190 aa9.94□□□□□ -0.82
TRAPPC9-208ENST00000520857 CLUHP3Q96NS8 147 aa9.94□□□□□ -0.82
TRAPPC9-208ENST00000520857 F5H697 171 aa9.94□□□□□ -0.82
TRAPPC9-208ENST00000520857 CCDC144NLQ6NUI1 221 aa9.94□□□□□ -0.82
TRAPPC9-208ENST00000520857 SRSF8Q9BRL6 282 aaKnown RBP9.94□□□□□ -0.82
TRAPPC9-208ENST00000520857 AGPAT4-IT1Q9H0P7 198 aa9.94□□□□□ -0.82
TRAPPC9-208ENST00000520857 IGLV11-55A0A075B6I3 123 aa9.94□□□□□ -0.82
TRAPPC9-208ENST00000520857 SPINK8P0C7L1 97 aa9.94□□□□□ -0.82
TRAPPC9-208ENST00000520857 ZNF672Q499Z4 452 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC9-208ENST00000520857 MYMXA0A1B0GTQ4 84 aa9.93□□□□□ -0.82
TRAPPC9-208ENST00000520857 SHISA9B4DS77 424 aa9.93□□□□□ -0.82
TRAPPC9-208ENST00000520857 CTSGP08311 255 aa9.93□□□□□ -0.82
TRAPPC9-208ENST00000520857 HLA-DRB4P13762 266 aa9.93□□□□□ -0.82
TRAPPC9-208ENST00000520857 C14orf178Q8N769 122 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC9-208ENST00000520857 PRO3102Q9H379 93 aa9.93□□□□□ -0.82
TRAPPC9-208ENST00000520857 HLA-DRB4X5D2U9 266 aa9.93□□□□□ -0.82
TRAPPC9-208ENST00000520857 F8VRH5 84 aa9.93□□□□□ -0.82
TRAPPC9-208ENST00000520857 LINC01559Q495D7 138 aa9.93□□□□□ -0.82
TRAPPC9-208ENST00000520857 GLMPQ8WWB7 406 aa9.93□□□□□ -0.82
TRAPPC9-208ENST00000520857 TMEM190Q8WZ59 177 aa9.93□□□□□ -0.82
TRAPPC9-208ENST00000520857 METTL26Q96S19 204 aa9.93□□□□□ -0.82
TRAPPC9-208ENST00000520857 PRADC1Q9BSG0 188 aa9.93□□□□□ -0.82
TRAPPC9-208ENST00000520857 GEMIN7Q9H840 131 aaKnown RBP9.93□□□□□ -0.82
TRAPPC9-208ENST00000520857 ATRXP46100 2492 aa9.92□□□□□ -0.82
TRAPPC9-208ENST00000520857 SLC25A16P16260 332 aa9.92□□□□□ -0.82
TRAPPC9-208ENST00000520857 DLX4Q92988 240 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC9-208ENST00000520857 PTH2Q96A98 100 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms