RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 Q6ZQT7 251 aa11.2□□□□□ -0.62
IGHV3-42-201ENST00000520410 LINC00467Q9BRT7 94 aa11.2□□□□□ -0.62
IGHV3-42-201ENST00000520410 ICOSQ9Y6W8 199 aa11.2□□□□□ -0.62
IGHV3-42-201ENST00000520410 H3BNG1 76 aa11.19□□□□□ -0.62
IGHV3-42-201ENST00000520410 SPINK4O60575 86 aa11.19□□□□□ -0.62
IGHV3-42-201ENST00000520410 NMBP08949 121 aa11.19□□□□□ -0.62
IGHV3-42-201ENST00000520410 FAM159AQ6UWV7 190 aa11.19□□□□□ -0.62
IGHV3-42-201ENST00000520410 MRPS16Q9Y3D3 137 aaKnown RBP11.19□□□□□ -0.62
IGHV3-42-201ENST00000520410 TRGV4A0A0C4DH28 118 aa11.18□□□□□ -0.62
IGHV3-42-201ENST00000520410 HMGB3O15347 200 aaKnown RBP11.18□□□□□ -0.62
IGHV3-42-201ENST00000520410 TMEM183BQ1AE95 376 aa11.18□□□□□ -0.62
IGHV3-42-201ENST00000520410 TMEM183AQ8IXX5 376 aa11.18□□□□□ -0.62
IGHV3-42-201ENST00000520410 LYPD1Q8N2G4 141 aa11.18□□□□□ -0.62
IGHV3-42-201ENST00000520410 VSIG2Q96IQ7 327 aa11.18□□□□□ -0.62
IGHV3-42-201ENST00000520410 ST6GAL2Q96JF0 529 aa11.18□□□□□ -0.62
IGHV3-42-201ENST00000520410 C8orf49Q96NF6 230 aa11.18□□□□□ -0.62
IGHV3-42-201ENST00000520410 RBAKDNA6NC62 111 aa11.17□□□□□ -0.62
IGHV3-42-201ENST00000520410 PGPA6NDG6 321 aa11.17□□□□□ -0.62
IGHV3-42-201ENST00000520410 DIRC3C9JPN6 131 aa11.17□□□□□ -0.62
IGHV3-42-201ENST00000520410 PCNPQ8WW12 178 aaKnown RBP11.17□□□□□ -0.62
IGHV3-42-201ENST00000520410 TRGV11A0A075B6L2 103 aa11.16□□□□□ -0.62
IGHV3-42-201ENST00000520410 RAB2AP61019 212 aa11.16□□□□□ -0.62
IGHV3-42-201ENST00000520410 GOLT1AQ6ZVE7 132 aa11.16□□□□□ -0.62
IGHV3-42-201ENST00000520410 UPK3BQ9BT76 320 aa11.16□□□□□ -0.62
IGHV3-42-201ENST00000520410 WFDC1Q9HC57 220 aa11.16□□□□□ -0.62
IGHV3-42-201ENST00000520410 OTORQ9NRC9 128 aa11.16□□□□□ -0.62
IGHV3-42-201ENST00000520410 ALG5Q9Y673 324 aa11.16□□□□□ -0.62
IGHV3-42-201ENST00000520410 HERC2O95714 4834 aa11.16□□□□□ -0.62
IGHV3-42-201ENST00000520410 F6UZH7 168 aa11.15□□□□□ -0.62
IGHV3-42-201ENST00000520410 ZNF266Q14584 549 aa11.15□□□□□ -0.62
IGHV3-42-201ENST00000520410 SPATA12Q7Z6I5 190 aa11.15□□□□□ -0.62
IGHV3-42-201ENST00000520410 HSD17B11Q8NBQ5 300 aa11.15□□□□□ -0.62
IGHV3-42-201ENST00000520410 OR10G4Q8NGN3 311 aa11.15□□□□□ -0.62
IGHV3-42-201ENST00000520410 OR10G9Q8NGN4 311 aa11.15□□□□□ -0.62
IGHV3-42-201ENST00000520410 OR10G7Q8NGN6 311 aa11.15□□□□□ -0.62
IGHV3-42-201ENST00000520410 C18orf15Q96N68 181 aa11.15□□□□□ -0.62
IGHV3-42-201ENST00000520410 KRTAP1-5Q9BYS1 174 aa11.15□□□□□ -0.62
IGHV3-42-201ENST00000520410 PRO0255Q9UI72 69 aa11.15□□□□□ -0.62
IGHV3-42-201ENST00000520410 HHLA3Q9XRX5 114 aa11.15□□□□□ -0.62
IGHV3-42-201ENST00000520410 TRBV7-9A0A0J9YWB2 115 aa11.14□□□□□ -0.63
IGHV3-42-201ENST00000520410 SIVA1O15304 175 aa11.14□□□□□ -0.63
IGHV3-42-201ENST00000520410 NXPH4O95158 308 aa11.14□□□□□ -0.63
IGHV3-42-201ENST00000520410 SFTA3P0C7M3 94 aa11.14□□□□□ -0.63
IGHV3-42-201ENST00000520410 GNG5P63218 68 aa11.14□□□□□ -0.63
IGHV3-42-201ENST00000520410 PQLC2Q6ZP29 291 aa11.14□□□□□ -0.63
IGHV3-42-201ENST00000520410 IQCF2Q8IXL9 164 aa11.14□□□□□ -0.63
IGHV3-42-201ENST00000520410 MDFICQ9P1T7 246 aa11.14□□□□□ -0.63
IGHV3-42-201ENST00000520410 DNAH2Q9P225 4427 aa11.14□□□□□ -0.63
IGHV3-42-201ENST00000520410 FAT2Q9NYQ8 4349 aa11.13□□□□□ -0.63
IGHV3-42-201ENST00000520410 SRIP30626 198 aa11.13□□□□□ -0.63
IGHV3-42-201ENST00000520410 CDC34P49427 236 aaPredicted RBP11.13□□□□□ -0.63
IGHV3-42-201ENST00000520410 SLAQ13239 276 aa11.13□□□□□ -0.63
IGHV3-42-201ENST00000520410 NDFIP1Q9BT67 221 aa11.13□□□□□ -0.63
IGHV3-42-201ENST00000520410 MED28Q9H204 178 aa11.13□□□□□ -0.63
IGHV3-42-201ENST00000520410 A0A1W2PPQ1 181 aa11.12□□□□□ -0.63
IGHV3-42-201ENST00000520410 ARL14EPLP0DKL9 152 aa11.12□□□□□ -0.63
IGHV3-42-201ENST00000520410 CRYBA4P53673 196 aa11.12□□□□□ -0.63
IGHV3-42-201ENST00000520410 LINC00315P59091 139 aa11.12□□□□□ -0.63
IGHV3-42-201ENST00000520410 MRPL23Q16540 153 aaKnown RBP11.12□□□□□ -0.63
IGHV3-42-201ENST00000520410 Q6AWC8 147 aa11.12□□□□□ -0.63
IGHV3-42-201ENST00000520410 SGK494Q96LW2 274 aa11.12□□□□□ -0.63
IGHV3-42-201ENST00000520410 SPXQ9BT56 116 aa11.12□□□□□ -0.63
IGHV3-42-201ENST00000520410 TREM1Q9NP99 234 aa11.12□□□□□ -0.63
IGHV3-42-201ENST00000520410 LENEPQ9Y5L5 61 aa11.12□□□□□ -0.63
IGHV3-42-201ENST00000520410 TRAV8-1A0A0A6YYK1 113 aa11.11□□□□□ -0.63
IGHV3-42-201ENST00000520410 TRAV21A0A0B4J279 112 aa11.11□□□□□ -0.63
IGHV3-42-201ENST00000520410 FHL2Q14192 279 aa11.11□□□□□ -0.63
IGHV3-42-201ENST00000520410 ZNF479Q96JC4 524 aa11.11□□□□□ -0.63
IGHV3-42-201ENST00000520410 BATF3Q9NR55 127 aa11.11□□□□□ -0.63
IGHV3-42-201ENST00000520410 KIAA1109Q2LD37 5005 aa11.11□□□□□ -0.63
IGHV3-42-201ENST00000520410 DNAH17Q9UFH2 4485 aa11.1□□□□□ -0.63
IGHV3-42-201ENST00000520410 K7EQM0 130 aa11.1□□□□□ -0.63
IGHV3-42-201ENST00000520410 NEGR1Q7Z3B1 354 aa11.1□□□□□ -0.63
IGHV3-42-201ENST00000520410 OR4C5Q8NGB2 326 aa11.1□□□□□ -0.63
IGHV3-42-201ENST00000520410 SDF2L1Q9HCN8 221 aa11.1□□□□□ -0.63
IGHV3-42-201ENST00000520410 GNRH2O43555 120 aa11.09□□□□□ -0.63
IGHV3-42-201ENST00000520410 GYPEP15421 78 aa11.09□□□□□ -0.63
IGHV3-42-201ENST00000520410 TMED6Q8WW62 240 aa11.09□□□□□ -0.63
IGHV3-42-201ENST00000520410 C9JCJ5 164 aa11.08□□□□□ -0.64
IGHV3-42-201ENST00000520410 EREGO14944 169 aa11.08□□□□□ -0.64
IGHV3-42-201ENST00000520410 PTTG1O95997 202 aa11.08□□□□□ -0.64
IGHV3-42-201ENST00000520410 TYMSP04818 313 aa11.08□□□□□ -0.64
IGHV3-42-201ENST00000520410 ZFP69Q49AA0 526 aa11.08□□□□□ -0.64
IGHV3-42-201ENST00000520410 LYPD5Q6UWN5 251 aa11.08□□□□□ -0.64
IGHV3-42-201ENST00000520410 MAPKAPK5-AS1Q8N8E1 139 aa11.08□□□□□ -0.64
IGHV3-42-201ENST00000520410 NHLRC2Q8NBF2 726 aa11.08□□□□□ -0.64
IGHV3-42-201ENST00000520410 TRAV9-2A0A087WT02 112 aa11.07□□□□□ -0.64
IGHV3-42-201ENST00000520410 FXYD6-FXYD2A0A087WZ82 144 aa11.07□□□□□ -0.64
IGHV3-42-201ENST00000520410 IGHV3-16A0A0C4DH30 117 aa11.07□□□□□ -0.64
IGHV3-42-201ENST00000520410 K7EQD1 137 aa11.07□□□□□ -0.64
IGHV3-42-201ENST00000520410 M0R2P5 195 aa11.07□□□□□ -0.64
IGHV3-42-201ENST00000520410 ORM1P02763 201 aa11.07□□□□□ -0.64
IGHV3-42-201ENST00000520410 ATP6V0CP27449 155 aa11.07□□□□□ -0.64
IGHV3-42-201ENST00000520410 INO80EQ8NBZ0 244 aaPredicted RBP11.07□□□□□ -0.64
IGHV3-42-201ENST00000520410 ASB13Q8WXK3 278 aa11.07□□□□□ -0.64
IGHV3-42-201ENST00000520410 RAB24Q969Q5 203 aa11.07□□□□□ -0.64
IGHV3-42-201ENST00000520410 KCNS1Q96KK3 526 aa11.07□□□□□ -0.64
IGHV3-42-201ENST00000520410 TXNDC17Q9BRA2 123 aa11.07□□□□□ -0.64
IGHV3-42-201ENST00000520410 LY96Q9Y6Y9 160 aa11.07□□□□□ -0.64
IGHV3-42-201ENST00000520410 TRAV4A0A0B4J268 109 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms