RNA–Protein interactions for RNA: ENST00000517910.1

AP003356.1-202, humanhuman

TSL 2 BASIC

Gene AP003356.1, Length 2,770 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003356.1-202ENST00000517910 IGHG3P01860 377 aa15.12■□□□□ 0.01
AP003356.1-202ENST00000517910 HLA-DMBP28068 263 aa15.12■□□□□ 0.01
AP003356.1-202ENST00000517910 DLX1P56177 255 aa15.12■□□□□ 0.01
AP003356.1-202ENST00000517910 CITED1Q99966 193 aa15.12■□□□□ 0.01
AP003356.1-202ENST00000517910 C8orf31Q8N9H6 132 aa15.12■□□□□ 0.01
AP003356.1-202ENST00000517910 PLEKHB2Q96CS7 222 aa15.12■□□□□ 0.01
AP003356.1-202ENST00000517910 VKORC1Q9BQB6 163 aa15.12■□□□□ 0.01
AP003356.1-202ENST00000517910 PRADC1Q9BSG0 188 aa15.12■□□□□ 0.01
AP003356.1-202ENST00000517910 TRBV20-1A0A075B6N2 111 aa15.11■□□□□ 0.01
AP003356.1-202ENST00000517910 LYPD2Q6UXB3 125 aa15.11■□□□□ 0.01
AP003356.1-202ENST00000517910 NRACQ8N912 160 aa15.11■□□□□ 0.01
AP003356.1-202ENST00000517910 CNIH1O95406 144 aa15.1■□□□□ 0.01
AP003356.1-202ENST00000517910 SMIM20Q8N5G0 67 aa15.1■□□□□ 0.01
AP003356.1-202ENST00000517910 TRAV12-1A0A0B4J245 112 aa15.1■□□□□ 0.01
AP003356.1-202ENST00000517910 ZZEF1O43149 2961 aa15.09■□□□□ 0.01
AP003356.1-202ENST00000517910 NDUFB3O43676 98 aa15.09■□□□□ 0.01
AP003356.1-202ENST00000517910 GAGE2BQ13066 116 aa15.09■□□□□ 0.01
AP003356.1-202ENST00000517910 GAGE2EQ4V326 116 aa15.09■□□□□ 0.01
AP003356.1-202ENST00000517910 GAGE2DQ9UEU5 116 aa15.09■□□□□ 0.01
AP003356.1-202ENST00000517910 PRTN3P24158 256 aa15.09■□□□□ 0.01
AP003356.1-202ENST00000517910 PSMG3-AS1Q96PY0 264 aa15.09■□□□□ 0.01
AP003356.1-202ENST00000517910 GAGE12JA6NER3 117 aa15.08■□□□□ 0.01
AP003356.1-202ENST00000517910 CCDC179H3BU77 68 aa15.08■□□□□ 0.01
AP003356.1-202ENST00000517910 RHODO00212 210 aa15.08■□□□□ 0.01
AP003356.1-202ENST00000517910 GAGE7O76087 117 aa15.08■□□□□ 0.01
AP003356.1-202ENST00000517910 GAGE12FP0CL80 117 aa15.08■□□□□ 0.01
AP003356.1-202ENST00000517910 GAGE12GP0CL81 117 aa15.08■□□□□ 0.01
AP003356.1-202ENST00000517910 GAGE12IP0CL82 117 aa15.08■□□□□ 0.01
AP003356.1-202ENST00000517910 SRD5A1P18405 259 aa15.08■□□□□ 0.01
AP003356.1-202ENST00000517910 NDUFV3P56181 108 aaKnown RBP15.08■□□□□ 0.01
AP003356.1-202ENST00000517910 SRSF2Q01130 221 aaKnown RBP15.08■□□□□ 0.01
AP003356.1-202ENST00000517910 GAGE4Q13068 117 aa15.08■□□□□ 0.01
AP003356.1-202ENST00000517910 SCGB3A1Q96QR1 104 aa15.08■□□□□ 0.01
AP003356.1-202ENST00000517910 CD7P09564 240 aa15.08■□□□□ 0
AP003356.1-202ENST00000517910 IGHV1-8P0DP01 117 aa15.08■□□□□ 0
AP003356.1-202ENST00000517910 ERCC8Q13216 396 aa15.08■□□□□ 0
AP003356.1-202ENST00000517910 SBSPONQ8IVN8 264 aa15.08■□□□□ 0
AP003356.1-202ENST00000517910 OR11H6Q8NGC7 330 aa15.08■□□□□ 0
AP003356.1-202ENST00000517910 AJUBAQ96IF1 538 aa15.08■□□□□ 0
AP003356.1-202ENST00000517910 FAM110AQ9BQ89 295 aa15.08■□□□□ 0
AP003356.1-202ENST00000517910 SCGB1C2P0DMR2 95 aa15.07■□□□□ 0
AP003356.1-202ENST00000517910 SLC25A16P16260 332 aa15.07■□□□□ 0
AP003356.1-202ENST00000517910 NDUFA11Q86Y39 141 aa15.07■□□□□ 0
AP003356.1-202ENST00000517910 COL27A1Q8IZC6 1860 aaPredicted RBP15.07■□□□□ 0
AP003356.1-202ENST00000517910 CFHR4Q92496 578 aa15.07■□□□□ 0
AP003356.1-202ENST00000517910 RPL32P62910 135 aaKnown RBP15.07■□□□□ 0
AP003356.1-202ENST00000517910 KLHL30-AS1Q8NEE0 82 aa15.07■□□□□ 0
AP003356.1-202ENST00000517910 PRSS33Q8NF86 280 aa15.07■□□□□ 0
AP003356.1-202ENST00000517910 TRAV8-2A0A0B4J237 113 aa15.06■□□□□ 0
AP003356.1-202ENST00000517910 SNCGO76070 127 aa15.06■□□□□ 0
AP003356.1-202ENST00000517910 GFRALQ6UXV0 394 aa15.06■□□□□ 0
AP003356.1-202ENST00000517910 IGHV1-3A0A0C4DH29 117 aa15.06■□□□□ 0
AP003356.1-202ENST00000517910 IGHG4P01861 327 aa15.06■□□□□ 0
AP003356.1-202ENST00000517910 RPL7P18124 248 aaKnown RBP15.06■□□□□ 0
AP003356.1-202ENST00000517910 DLX6P56179 175 aa15.06■□□□□ 0
AP003356.1-202ENST00000517910 TRAV4A0A0B4J268 109 aa15.05■□□□□ 0
AP003356.1-202ENST00000517910 LOXP28300 417 aaPredicted RBP15.05■□□□□ 0
AP003356.1-202ENST00000517910 TTC32Q5I0X7 151 aa15.05■□□□□ 0
AP003356.1-202ENST00000517910 ZNF474Q6S9Z5 364 aaPredicted RBP15.05■□□□□ -0
AP003356.1-202ENST00000517910 NEXN-AS1Q8NBZ9 246 aa15.05■□□□□ -0
AP003356.1-202ENST00000517910 CCL17Q92583 94 aa15.05■□□□□ -0
AP003356.1-202ENST00000517910 RP1L1Q8IWN7 2480 aaPredicted RBP15.05■□□□□ -0
AP003356.1-202ENST00000517910 TPRP12270 2363 aaKnown RBP15.05■□□□□ -0
AP003356.1-202ENST00000517910 DYNAPQ8N1N2 210 aa15.04■□□□□ -0
AP003356.1-202ENST00000517910 IGKV3D-20A0A0C4DH25 116 aa15.04■□□□□ -0
AP003356.1-202ENST00000517910 TMEM95Q3KNT9 176 aa15.04■□□□□ -0
AP003356.1-202ENST00000517910 LAMA5O15230 3695 aa15.04■□□□□ -0
AP003356.1-202ENST00000517910 TACC2O95359 2948 aa15.03■□□□□ -0
AP003356.1-202ENST00000517910 CRLF1O75462 422 aa15.03■□□□□ -0
AP003356.1-202ENST00000517910 TMEM155Q4W5P6 130 aa15.03■□□□□ -0
AP003356.1-202ENST00000517910 IL17RELQ6ZVW7 336 aa15.03■□□□□ -0
AP003356.1-202ENST00000517910 TDHQ8IZJ6 230 aa15.03■□□□□ -0
AP003356.1-202ENST00000517910 RAB1BQ9H0U4 201 aa15.03■□□□□ -0
AP003356.1-202ENST00000517910 SLC25A20O43772 301 aa15.02■□□□□ -0
AP003356.1-202ENST00000517910 SMIM2Q9BVW6 85 aa15.02■□□□□ -0
AP003356.1-202ENST00000517910 ONECUT1Q9UBC0 465 aa15.02■□□□□ -0
AP003356.1-202ENST00000517910 PKDREJQ9NTG1 2253 aa15.02■□□□□ -0
AP003356.1-202ENST00000517910 PRAC2D3DTV9 90 aa15.02□□□□□ -0.01
AP003356.1-202ENST00000517910 IFITM1P13164 125 aa15.02□□□□□ -0.01
AP003356.1-202ENST00000517910 LPAL2Q16609 132 aa15.02□□□□□ -0.01
AP003356.1-202ENST00000517910 SEM1Q6ZVN7 128 aa15.02□□□□□ -0.01
AP003356.1-202ENST00000517910 C11orf21Q9P2W6 132 aa15.02□□□□□ -0.01
AP003356.1-202ENST00000517910 SMAD5-AS1Q9Y6J3 95 aa15.02□□□□□ -0.01
AP003356.1-202ENST00000517910 COX6B1P14854 86 aa15.02□□□□□ -0.01
AP003356.1-202ENST00000517910 ZNF672Q499Z4 452 aaPredicted RBP15.02□□□□□ -0.01
AP003356.1-202ENST00000517910 C22orf34Q6ZV56 151 aa15.02□□□□□ -0.01
AP003356.1-202ENST00000517910 RASL10AQ92737 203 aa15.02□□□□□ -0.01
AP003356.1-202ENST00000517910 C9JAW5 83 aa15.01□□□□□ -0.01
AP003356.1-202ENST00000517910 CFC1BP0CG36 223 aa15.01□□□□□ -0.01
AP003356.1-202ENST00000517910 CFC1P0CG37 223 aa15.01□□□□□ -0.01
AP003356.1-202ENST00000517910 TMEM178BH3BS89 294 aa15.01□□□□□ -0.01
AP003356.1-202ENST00000517910 SPANXN1Q5VSR9 72 aa15.01□□□□□ -0.01
AP003356.1-202ENST00000517910 TOMM6Q96B49 74 aa15.01□□□□□ -0.01
AP003356.1-202ENST00000517910 MAP1BP46821 2468 aaKnown RBP15□□□□□ -0.01
AP003356.1-202ENST00000517910 ASIPP42127 132 aa15□□□□□ -0.01
AP003356.1-202ENST00000517910 C10orf126Q8N4M7 172 aa15□□□□□ -0.01
AP003356.1-202ENST00000517910 BAALCQ8WXS3 180 aa15□□□□□ -0.01
AP003356.1-202ENST00000517910 IGHV3OR16-8A0A075B7F1 116 aa15□□□□□ -0.01
AP003356.1-202ENST00000517910 IGHV3-23P01764 117 aa15□□□□□ -0.01
AP003356.1-202ENST00000517910 MFAP4P55083 255 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms