RNA–Protein interactions for RNA: ENST00000514693.5

PROM1-217, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-217ENST00000514693 Q9H521 79 aa2.52□□□□□ -2.01
PROM1-217ENST00000514693 NIT2Q9NQR4 276 aa2.52□□□□□ -2.01
PROM1-217ENST00000514693 MED9Q9NWA0 146 aa2.52□□□□□ -2.01
PROM1-217ENST00000514693 NHP2Q9NX24 153 aaKnown RBP2.52□□□□□ -2.01
PROM1-217ENST00000514693 HS3ST2Q9Y278 367 aa2.52□□□□□ -2.01
PROM1-217ENST00000514693 USP34Q70CQ2 3546 aa2.51□□□□□ -2.01
PROM1-217ENST00000514693 MYH10P35580 1976 aa2.51□□□□□ -2.01
PROM1-217ENST00000514693 TCHHQ07283 1943 aa2.51□□□□□ -2.01
PROM1-217ENST00000514693 IGLV3-9A0A075B6K5 115 aa2.51□□□□□ -2.01
PROM1-217ENST00000514693 IGKV1D-17A0A075B6S4 117 aa2.51□□□□□ -2.01
PROM1-217ENST00000514693 K7EP13 123 aa2.51□□□□□ -2.01
PROM1-217ENST00000514693 HIST1H2BKO60814 126 aa2.51□□□□□ -2.01
PROM1-217ENST00000514693 TIMM17BO60830 172 aa2.51□□□□□ -2.01
PROM1-217ENST00000514693 HIST1H2BJP06899 126 aa2.51□□□□□ -2.01
PROM1-217ENST00000514693 FABP2P12104 132 aa2.51□□□□□ -2.01
PROM1-217ENST00000514693 SDC2P34741 201 aa2.51□□□□□ -2.01
PROM1-217ENST00000514693 HES1Q14469 280 aa2.51□□□□□ -2.01
PROM1-217ENST00000514693 TAF9Q16594 264 aa2.51□□□□□ -2.01
PROM1-217ENST00000514693 SMIM21Q3B7S5 101 aa2.51□□□□□ -2.01
PROM1-217ENST00000514693 PHF5AQ7RTV0 110 aaKnown RBP2.51□□□□□ -2.01
PROM1-217ENST00000514693 C4orf33Q8N1A6 199 aa2.51□□□□□ -2.01
PROM1-217ENST00000514693 OR8B3Q8NGG8 313 aa2.51□□□□□ -2.01
PROM1-217ENST00000514693 SFT2D1Q8WV19 159 aa2.51□□□□□ -2.01
PROM1-217ENST00000514693 ZNF714Q96N38 554 aa2.51□□□□□ -2.01
PROM1-217ENST00000514693 GGACTQ9BVM4 153 aa2.51□□□□□ -2.01
PROM1-217ENST00000514693 TCEAL2Q9H3H9 227 aaPredicted RBP2.51□□□□□ -2.01
PROM1-217ENST00000514693 AP4S1Q9Y587 144 aa2.51□□□□□ -2.01
PROM1-217ENST00000514693 ADGRB1O14514 1584 aa2.51□□□□□ -2.01
PROM1-217ENST00000514693 NUP98P52948 1817 aa2.51□□□□□ -2.01
PROM1-217ENST00000514693 ZNF292O60281 2723 aa2.51□□□□□ -2.01
PROM1-217ENST00000514693 WDFY4Q6ZS81 3184 aa2.51□□□□□ -2.01
PROM1-217ENST00000514693 SPEF2Q9C093 1822 aa2.5□□□□□ -2.01
PROM1-217ENST00000514693 TRAV3A0A0B4J244 114 aa2.5□□□□□ -2.01
PROM1-217ENST00000514693 DBIP07108 87 aaKnown RBP2.5□□□□□ -2.01
PROM1-217ENST00000514693 CMPK1P30085 196 aa2.5□□□□□ -2.01
PROM1-217ENST00000514693 SDC4P31431 198 aa2.5□□□□□ -2.01
PROM1-217ENST00000514693 VMA21Q3ZAQ7 101 aa2.5□□□□□ -2.01
PROM1-217ENST00000514693 C6orf52Q5T4I8 152 aa2.5□□□□□ -2.01
PROM1-217ENST00000514693 KRTAP5-5Q701N2 237 aaPredicted RBP2.5□□□□□ -2.01
PROM1-217ENST00000514693 OR8I2Q8N0Y5 310 aa2.5□□□□□ -2.01
PROM1-217ENST00000514693 LRRC18Q8N456 261 aa2.5□□□□□ -2.01
PROM1-217ENST00000514693 MMGT1Q8N4V1 131 aa2.5□□□□□ -2.01
PROM1-217ENST00000514693 ZNF418Q8TF45 676 aaPredicted RBP2.5□□□□□ -2.01
PROM1-217ENST00000514693 C1orf54Q8WWF1 131 aa2.5□□□□□ -2.01
PROM1-217ENST00000514693 SAR1AQ9NR31 198 aa2.5□□□□□ -2.01
PROM1-217ENST00000514693 TAS2R4Q9NYW5 299 aa2.5□□□□□ -2.01
PROM1-217ENST00000514693 COPZ2Q9P299 210 aa2.5□□□□□ -2.01
PROM1-217ENST00000514693 MYO9BQ13459 2157 aa2.5□□□□□ -2.01
PROM1-217ENST00000514693 CFAP47Q6ZTR5 3102 aa2.5□□□□□ -2.01
PROM1-217ENST00000514693 LTBP2Q14767 1821 aa2.49□□□□□ -2.01
PROM1-217ENST00000514693 CCDC88CQ9P219 2028 aa2.49□□□□□ -2.01
PROM1-217ENST00000514693 ANKRD11Q6UB99 2663 aaPredicted RBP2.49□□□□□ -2.01
PROM1-217ENST00000514693 DLEC1Q9Y238 1755 aa2.49□□□□□ -2.01
PROM1-217ENST00000514693 MON2Q7Z3U7 1717 aa2.49□□□□□ -2.01
PROM1-217ENST00000514693 NRXN2Q9P2S2 1712 aa2.49□□□□□ -2.01
PROM1-217ENST00000514693 EPG5Q9HCE0 2579 aa2.49□□□□□ -2.01
PROM1-217ENST00000514693 IGHV1-58A0A0C4DH39 117 aa2.49□□□□□ -2.01
PROM1-217ENST00000514693 A0A0G2JQZ4 141 aa2.49□□□□□ -2.01
PROM1-217ENST00000514693 ZNF705FA8MVS1 300 aaPredicted RBP2.49□□□□□ -2.01
PROM1-217ENST00000514693 SNAPC5O75971 98 aa2.49□□□□□ -2.01
PROM1-217ENST00000514693 TNFSF15O95150 251 aa2.49□□□□□ -2.01
PROM1-217ENST00000514693 NDUFA6P56556 154 aa2.49□□□□□ -2.01
PROM1-217ENST00000514693 ESRGQ1W209 222 aa2.49□□□□□ -2.01
PROM1-217ENST00000514693 CLLU1Q5K131 121 aa2.49□□□□□ -2.01
PROM1-217ENST00000514693 HCP5Q6MZN7 132 aa2.49□□□□□ -2.01
PROM1-217ENST00000514693 PATE2Q6UY27 113 aa2.49□□□□□ -2.01
PROM1-217ENST00000514693 ZNF826PQ6ZT77 177 aa2.49□□□□□ -2.01
PROM1-217ENST00000514693 LINC00305Q7Z4B0 112 aa2.49□□□□□ -2.01
PROM1-217ENST00000514693 LYPD1Q8N2G4 141 aa2.49□□□□□ -2.01
PROM1-217ENST00000514693 LXNQ9BS40 222 aa2.49□□□□□ -2.01
PROM1-217ENST00000514693 SCP2D1Q9UJQ7 156 aa2.49□□□□□ -2.01
PROM1-217ENST00000514693 HSPB8Q9UJY1 196 aa2.49□□□□□ -2.01
PROM1-217ENST00000514693 C5orf42Q9H799 3197 aa2.49□□□□□ -2.01
PROM1-217ENST00000514693 MRC1P22897 1456 aa2.49□□□□□ -2.01
PROM1-217ENST00000514693 ANKRD31Q8N7Z5 1873 aa2.49□□□□□ -2.01
PROM1-217ENST00000514693 AFDNP55196 1824 aaKnown RBP2.49□□□□□ -2.01
PROM1-217ENST00000514693 SPTBN4Q9H254 2564 aa2.49□□□□□ -2.01
PROM1-217ENST00000514693 CACNA1BQ00975 2339 aa2.48□□□□□ -2.01
PROM1-217ENST00000514693 NUMA1Q14980 2115 aa2.48□□□□□ -2.01
PROM1-217ENST00000514693 TRAV1-1A0A0B4J248 108 aa2.48□□□□□ -2.01
PROM1-217ENST00000514693 LOC107984640A0A0U1RRK4 108 aa2.48□□□□□ -2.01
PROM1-217ENST00000514693 A8MWV9 139 aa2.48□□□□□ -2.01
PROM1-217ENST00000514693 IBA57-AS1B1ANH7 110 aa2.48□□□□□ -2.01
PROM1-217ENST00000514693 C9JAW5 83 aa2.48□□□□□ -2.01
PROM1-217ENST00000514693 RER1O15258 196 aa2.48□□□□□ -2.01
PROM1-217ENST00000514693 MGST1P10620 155 aaKnown RBP2.48□□□□□ -2.01
PROM1-217ENST00000514693 IL7P13232 177 aa2.48□□□□□ -2.01
PROM1-217ENST00000514693 PKIAP61925 76 aa2.48□□□□□ -2.01
PROM1-217ENST00000514693 TMEM155Q4W5P6 130 aa2.48□□□□□ -2.01
PROM1-217ENST00000514693 IZUMO2Q6UXV1 221 aa2.48□□□□□ -2.01
PROM1-217ENST00000514693 ARPINQ7Z6K5 226 aa2.48□□□□□ -2.01
PROM1-217ENST00000514693 TCTE3Q8IZS6 198 aa2.48□□□□□ -2.01
PROM1-217ENST00000514693 OR5D16Q8NGK9 328 aa2.48□□□□□ -2.01
PROM1-217ENST00000514693 TIMM21Q9BVV7 248 aa2.48□□□□□ -2.01
PROM1-217ENST00000514693 TPT1P8Q9HAU6 139 aa2.48□□□□□ -2.01
PROM1-217ENST00000514693 METTL1Q9UBP6 276 aaKnown RBP2.48□□□□□ -2.01
PROM1-217ENST00000514693 HIGD1AQ9Y241 93 aa2.48□□□□□ -2.01
PROM1-217ENST00000514693 DCHS1Q96JQ0 3298 aa2.48□□□□□ -2.01
PROM1-217ENST00000514693 XIRP2A4UGR9 3374 aa2.47□□□□□ -2.01
PROM1-217ENST00000514693 TRBV7-6A0A0J9YX20 115 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms