RNA–Protein interactions for RNA: ENST00000514693.5

PROM1-217, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-217ENST00000514693 AEBP2Q6ZN18 517 aaPredicted RBP22.54■■□□□ 1.2
PROM1-217ENST00000514693 CHIC1Q5VXU3 224 aa21.6■■□□□ 1.05
PROM1-217ENST00000514693 SENP3Q9H4L4 574 aaPredicted RBP19.29■□□□□ 0.68
PROM1-217ENST00000514693 PHF23Q9BUL5 403 aaPredicted RBP19.03■□□□□ 0.64
PROM1-217ENST00000514693 FOXD1Q16676 465 aa17.91■□□□□ 0.46
PROM1-217ENST00000514693 PLPPR3Q6T4P5 718 aa17.38■□□□□ 0.37
PROM1-217ENST00000514693 PPP6R1Q9UPN7 881 aa16.84■□□□□ 0.29
PROM1-217ENST00000514693 ADRA2BP18089 450 aa16.83■□□□□ 0.28
PROM1-217ENST00000514693 PIAS4Q8N2W9 510 aaPredicted RBP16.83■□□□□ 0.28
PROM1-217ENST00000514693 MSH5O43196 834 aa16.77■□□□□ 0.28
PROM1-217ENST00000514693 POTEDQ86YR6 584 aa16.59■□□□□ 0.25
PROM1-217ENST00000514693 SCAF1Q9H7N4 1312 aaKnown RBP15.5■□□□□ 0.07
PROM1-217ENST00000514693 MAPK8IP2Q13387 824 aaPredicted RBP15.4■□□□□ 0.06
PROM1-217ENST00000514693 DMRT2Q9Y5R5 561 aa15.29■□□□□ 0.04
PROM1-217ENST00000514693 PPP4R3CPQ6ZMV5 832 aa15.23■□□□□ 0.03
PROM1-217ENST00000514693 CNKSR2Q8WXI2 1034 aa14.92□□□□□ -0.02
PROM1-217ENST00000514693 HOXD11P31277 338 aaPredicted RBP14.77□□□□□ -0.05
PROM1-217ENST00000514693 DCAF8L1A6NGE4 600 aa14.76□□□□□ -0.05
PROM1-217ENST00000514693 NCBP3Q53F19 620 aaKnown RBP14.76□□□□□ -0.05
PROM1-217ENST00000514693 RNF216Q9NWF9 866 aaPredicted RBP14.73□□□□□ -0.05
PROM1-217ENST00000514693 NPM3O75607 178 aaKnown RBP14.47□□□□□ -0.09
PROM1-217ENST00000514693 KCNA4P22459 653 aa14.33□□□□□ -0.12
PROM1-217ENST00000514693 CACNB1Q02641 598 aaPredicted RBP14.31□□□□□ -0.12
PROM1-217ENST00000514693 RNF39Q9H2S5 420 aa14.27□□□□□ -0.13
PROM1-217ENST00000514693 DNAJC5BQ9UF47 199 aa14.23□□□□□ -0.13
PROM1-217ENST00000514693 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.17□□□□□ -0.14
PROM1-217ENST00000514693 C1QBPQ07021 282 aaKnown RBP14.11□□□□□ -0.15
PROM1-217ENST00000514693 U3KPZ7 1027 aaPredicted RBP13.81□□□□□ -0.2
PROM1-217ENST00000514693 SLC4A2P04920 1241 aa13.74□□□□□ -0.21
PROM1-217ENST00000514693 CAPN15O75808 1086 aa13.61□□□□□ -0.23
PROM1-217ENST00000514693 SLC4A1APQ9BWU0 796 aaKnown RBP13.61□□□□□ -0.23
PROM1-217ENST00000514693 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.57□□□□□ -0.24
PROM1-217ENST00000514693 HNRNPUL2Q1KMD3 747 aaKnown RBP13.57□□□□□ -0.24
PROM1-217ENST00000514693 SPINK5Q9NQ38 1064 aaPredicted RBP13.57□□□□□ -0.24
PROM1-217ENST00000514693 APLP2Q06481 763 aa13.56□□□□□ -0.24
PROM1-217ENST00000514693 SAMD1Q6SPF0 538 aaPredicted RBP13.48□□□□□ -0.25
PROM1-217ENST00000514693 TRHP20396 242 aaPredicted RBP13.42□□□□□ -0.26
PROM1-217ENST00000514693 DSG3P32926 999 aa13.42□□□□□ -0.26
PROM1-217ENST00000514693 MYCNP04198 464 aaPredicted RBP13.41□□□□□ -0.26
PROM1-217ENST00000514693 ZNF219Q9P2Y4 722 aaPredicted RBP13.4□□□□□ -0.26
PROM1-217ENST00000514693 FOXD4L1Q9NU39 408 aa13.36□□□□□ -0.27
PROM1-217ENST00000514693 ABCB7O75027 752 aa13.28□□□□□ -0.28
PROM1-217ENST00000514693 ZBTB22O15209 634 aa13.14□□□□□ -0.31
PROM1-217ENST00000514693 POLA2Q14181 598 aa13.08□□□□□ -0.32
PROM1-217ENST00000514693 ATF5Q9Y2D1 282 aaPredicted RBP13.03□□□□□ -0.32
PROM1-217ENST00000514693 EHMT2Q96KQ7 1210 aa12.98□□□□□ -0.33
PROM1-217ENST00000514693 ATXN8OSP0DMR3 200 aa12.93□□□□□ -0.34
PROM1-217ENST00000514693 POTEHQ6S545 545 aa12.9□□□□□ -0.34
PROM1-217ENST00000514693 RBM42Q9BTD8 480 aaKnown RBP12.88□□□□□ -0.35
PROM1-217ENST00000514693 ZBTB12Q9Y330 459 aaPredicted RBP12.87□□□□□ -0.35
PROM1-217ENST00000514693 CSRNP3Q8WYN3 585 aa12.69□□□□□ -0.38
PROM1-217ENST00000514693 OSCARQ8IYS5 282 aa12.64□□□□□ -0.39
PROM1-217ENST00000514693 FBLN2P98095 1184 aa12.63□□□□□ -0.39
PROM1-217ENST00000514693 AKT1S1Q96B36 256 aa12.58□□□□□ -0.4
PROM1-217ENST00000514693 CHRDL2Q6WN34 429 aa12.5□□□□□ -0.41
PROM1-217ENST00000514693 SPDYE2BA6NHP3 402 aa12.44□□□□□ -0.42
PROM1-217ENST00000514693 SPDYE6P0CI01 402 aa12.44□□□□□ -0.42
PROM1-217ENST00000514693 SPDYE2Q495Y8 402 aa12.44□□□□□ -0.42
PROM1-217ENST00000514693 REM2Q8IYK8 340 aaPredicted RBP12.44□□□□□ -0.42
PROM1-217ENST00000514693 MKRN4PQ13434 485 aaPredicted RBP12.43□□□□□ -0.42
PROM1-217ENST00000514693 ZNF692Q9BU19 519 aaPredicted RBP12.34□□□□□ -0.43
PROM1-217ENST00000514693 PITPNM1O00562 1244 aa12.31□□□□□ -0.44
PROM1-217ENST00000514693 SSUH2Q9Y2M2 353 aa12.25□□□□□ -0.45
PROM1-217ENST00000514693 PIP4P2Q8N4L2 257 aa12.21□□□□□ -0.45
PROM1-217ENST00000514693 SPDYE1Q8NFV5 336 aaPredicted RBP12.21□□□□□ -0.45
PROM1-217ENST00000514693 CLEC11AQ9Y240 323 aa12.2□□□□□ -0.46
PROM1-217ENST00000514693 PABPN1Q86U42 306 aaKnown RBP eCLIP12.15□□□□□ -0.46
PROM1-217ENST00000514693 FXR2P51116 673 aaKnown RBP eCLIP12.14□□□□□ -0.47
PROM1-217ENST00000514693 PRKAR2AP13861 404 aaKnown RBP12.02□□□□□ -0.49
PROM1-217ENST00000514693 SPDYE4A6NLX3 237 aa12.01□□□□□ -0.49
PROM1-217ENST00000514693 HAX1O00165 279 aa12.01□□□□□ -0.49
PROM1-217ENST00000514693 PRR29P0C7W0 189 aa12.01□□□□□ -0.49
PROM1-217ENST00000514693 SP7Q8TDD2 431 aaPredicted RBP11.92□□□□□ -0.5
PROM1-217ENST00000514693 CHADLQ6NUI6 762 aa11.89□□□□□ -0.51
PROM1-217ENST00000514693 STAG3Q9UJ98 1225 aa11.88□□□□□ -0.51
PROM1-217ENST00000514693 SLC24A1O60721 1099 aa11.77□□□□□ -0.53
PROM1-217ENST00000514693 EVX2Q03828 476 aa11.76□□□□□ -0.53
PROM1-217ENST00000514693 C19orf67A6NJJ6 358 aa11.75□□□□□ -0.53
PROM1-217ENST00000514693 FARP1Q9Y4F1 1045 aaPredicted RBP11.75□□□□□ -0.53
PROM1-217ENST00000514693 CREBZFQ9NS37 354 aa11.67□□□□□ -0.54
PROM1-217ENST00000514693 CD44P16070 742 aaKnown RBP11.66□□□□□ -0.54
PROM1-217ENST00000514693 PROM2Q8N271 834 aa11.65□□□□□ -0.54
PROM1-217ENST00000514693 RTN4Q9NQC3 1192 aaKnown RBP11.62□□□□□ -0.55
PROM1-217ENST00000514693 FKBP8Q14318 412 aa11.57□□□□□ -0.56
PROM1-217ENST00000514693 AMER1Q5JTC6 1135 aaPredicted RBP11.57□□□□□ -0.56
PROM1-217ENST00000514693 NPM1P06748 294 aaKnown RBP eCLIP11.56□□□□□ -0.56
PROM1-217ENST00000514693 GABBR2O75899 941 aa11.55□□□□□ -0.56
PROM1-217ENST00000514693 PAK3O75914 559 aaPredicted RBP11.52□□□□□ -0.57
PROM1-217ENST00000514693 ZRANB1Q9UGI0 708 aa11.52□□□□□ -0.57
PROM1-217ENST00000514693 PLEKHG5O94827 1062 aa11.51□□□□□ -0.57
PROM1-217ENST00000514693 CLCN6P51797 869 aa11.48□□□□□ -0.57
PROM1-217ENST00000514693 MIER1Q8N108 512 aa11.47□□□□□ -0.57
PROM1-217ENST00000514693 MNX1P50219 401 aaPredicted RBP11.46□□□□□ -0.57
PROM1-217ENST00000514693 ZNF579Q8NAF0 562 aaKnown RBP11.45□□□□□ -0.58
PROM1-217ENST00000514693 PLCD3Q8N3E9 789 aa11.42□□□□□ -0.58
PROM1-217ENST00000514693 DCBLD2Q96PD2 775 aa11.35□□□□□ -0.59
PROM1-217ENST00000514693 PHF12Q96QT6 1004 aa11.34□□□□□ -0.59
PROM1-217ENST00000514693 TSPYL2Q9H2G4 693 aaPredicted RBP11.34□□□□□ -0.59
PROM1-217ENST00000514693 ZBTB47Q9UFB7 747 aaPredicted RBP11.33□□□□□ -0.6
PROM1-217ENST00000514693 FBXO3Q9UK99 471 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms