RNA–Protein interactions for RNA: ENST00000508808.1

TRIM23-206, Transcript of tripartite motif containing 23, humanhuman

TSL 5

Gene TRIM23, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-206ENST00000508808 BRMS1LQ5PSV4 323 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 TRIQKQ629K1 86 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 FP248Q71RG6 208 aaPredicted RBP0.71□□□□□ -2.3
TRIM23-206ENST00000508808 TAC4Q86UU9 113 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 TMEM86AQ8N2M4 240 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 LRRC18Q8N456 261 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 LINC00471Q8N535 108 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 C3orf56Q8N813 242 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 GDPD1Q8N9F7 314 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 PFN4Q8NHR9 129 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 MCFD2Q8NI22 146 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 STAG3L4Q8TBR4 150 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 BORCS5Q969J3 196 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 CGREF1Q99674 301 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 KIFC1Q9BW19 673 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 C6orf62Q9GZU0 229 aaPredicted RBP0.71□□□□□ -2.3
TRIM23-206ENST00000508808 PCBD2Q9H0N5 130 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 PRO1933Q9H354 126 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 CST9LQ9H4G1 147 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 NMNAT1Q9HAN9 279 aaPredicted RBP0.71□□□□□ -2.3
TRIM23-206ENST00000508808 TMEM138Q9NPI0 162 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 SLC39A9Q9NUM3 307 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 FAIMQ9NVQ4 179 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 ARMC1Q9NVT9 282 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 IL20Q9NYY1 176 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 OPTCQ9UBM4 332 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 GNG8Q9UK08 70 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 ARL2BPQ9Y2Y0 163 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 NDUFAF1Q9Y375 327 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 Q9Y3F1 56 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 PTPRFP10586 1907 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 HELZP42694 1942 aaKnown RBP0.71□□□□□ -2.3
TRIM23-206ENST00000508808 CPAMD8Q8IZJ3 1885 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 URB1O60287 2271 aaKnown RBP0.71□□□□□ -2.3
TRIM23-206ENST00000508808 ADGRG4Q8IZF6 3080 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 PCDH15Q96QU1 1955 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 COL12A1Q99715 3063 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 MEIKINA0A087WXM9 373 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 A0A096LPI6 279 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 TRAV3A0A0B4J244 114 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 PNMA8CA0A1B0GUJ8 204 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 A0A1B0GV72 72 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 E5RI56 91 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 G3V2T6 193 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 SDCBPO00560 298 aaPredicted RBP0.7□□□□□ -2.3
TRIM23-206ENST00000508808 GNG7O60262 68 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 MRPS14O60783 128 aaKnown RBP0.7□□□□□ -2.3
TRIM23-206ENST00000508808 SNAPC5O75971 98 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 RBP1P09455 135 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 OR4E1P0C645 316 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 ASAH2BP0C7U1 165 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 S100GP29377 79 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 FXYD2P54710 66 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 TAS2R41P59536 307 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 MAXP61244 160 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 ZNF846Q147U1 533 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 POU6F1Q14863 301 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 TSNQ15631 228 aaKnown RBP0.7□□□□□ -2.3
TRIM23-206ENST00000508808 DEFB113Q30KQ7 82 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 KRTAP20-1Q3LI63 56 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 LIN52Q52LA3 116 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 LINC01554Q52M75 96 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 SAMD13Q5VXD3 122 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 RPL13AP3Q6NVV1 102 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 Q6Q795 121 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 DPPA3Q6W0C5 159 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 MIR17HGQ75NE6 70 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 AAED1Q7RTV5 226 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 OOSP2Q86WS3 158 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 CTAGE3PQ8IX95 158 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 IFT20Q8IY31 132 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 TSTD1Q8NFU3 115 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 OR13D1Q8NGV5 346 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 OR5H6Q8NGV6 325 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 OR10K1Q8NGX5 313 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 GNPDA2Q8TDQ7 276 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 NAT14Q8WUY8 206 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 C11orf40Q8WZ69 217 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 AP3S1Q92572 193 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 SCGB3A1Q96QR1 104 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 SERPINI1Q99574 410 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 C20orf27Q9GZN8 174 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 CACYBPQ9HB71 228 aaKnown RBP0.7□□□□□ -2.3
TRIM23-206ENST00000508808 NIT2Q9NQR4 276 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 BIN3Q9NQY0 253 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 OSTCQ9NRP0 149 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 C19orf12Q9NSK7 152 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 MED29Q9NX70 200 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 TAS2R7Q9NYW3 318 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 STOML2Q9UJZ1 356 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 UTP11Q9Y3A2 253 aaKnown RBP0.7□□□□□ -2.3
TRIM23-206ENST00000508808 LHFPL6Q9Y693 200 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 AKAP13Q12802 2813 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 CELSR2Q9HCU4 2923 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 SACSQ9NZJ4 4579 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 PTPRDP23468 1912 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 PDZD2O15018 2839 aa0.7□□□□□ -2.3
TRIM23-206ENST00000508808 SPTA1P02549 2419 aa0.69□□□□□ -2.3
TRIM23-206ENST00000508808 HIVEP1P15822 2718 aa0.69□□□□□ -2.3
TRIM23-206ENST00000508808 TRAV1-1A0A0B4J248 108 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms