RNA–Protein interactions for RNA: ENST00000508808.1

TRIM23-206, Transcript of tripartite motif containing 23, humanhuman

TSL 5

Gene TRIM23, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-206ENST00000508808 AEBP2Q6ZN18 517 aaPredicted RBP23.37■■□□□ 1.33
TRIM23-206ENST00000508808 CHIC1Q5VXU3 224 aa22.8■■□□□ 1.24
TRIM23-206ENST00000508808 PHF23Q9BUL5 403 aaPredicted RBP20.03■□□□□ 0.8
TRIM23-206ENST00000508808 SENP3Q9H4L4 574 aaPredicted RBP19.86■□□□□ 0.77
TRIM23-206ENST00000508808 POTEDQ86YR6 584 aa19.53■□□□□ 0.72
TRIM23-206ENST00000508808 PLPPR3Q6T4P5 718 aa18.51■□□□□ 0.55
TRIM23-206ENST00000508808 FOXD1Q16676 465 aa18.42■□□□□ 0.54
TRIM23-206ENST00000508808 ADRA2BP18089 450 aa17.67■□□□□ 0.42
TRIM23-206ENST00000508808 PPP6R1Q9UPN7 881 aa17.67■□□□□ 0.42
TRIM23-206ENST00000508808 MSH5O43196 834 aa17.46■□□□□ 0.39
TRIM23-206ENST00000508808 PIAS4Q8N2W9 510 aaPredicted RBP17.4■□□□□ 0.38
TRIM23-206ENST00000508808 PPP4R3CPQ6ZMV5 832 aa16.3■□□□□ 0.2
TRIM23-206ENST00000508808 SCAF1Q9H7N4 1312 aaKnown RBP16.17■□□□□ 0.18
TRIM23-206ENST00000508808 MAPK8IP2Q13387 824 aaPredicted RBP16.03■□□□□ 0.16
TRIM23-206ENST00000508808 KCNA4P22459 653 aa15.9■□□□□ 0.14
TRIM23-206ENST00000508808 CACNB1Q02641 598 aaPredicted RBP15.89■□□□□ 0.13
TRIM23-206ENST00000508808 NCBP3Q53F19 620 aaKnown RBP15.87■□□□□ 0.13
TRIM23-206ENST00000508808 CNKSR2Q8WXI2 1034 aa15.85■□□□□ 0.13
TRIM23-206ENST00000508808 DMRT2Q9Y5R5 561 aa15.84■□□□□ 0.13
TRIM23-206ENST00000508808 NPM3O75607 178 aaKnown RBP15.64■□□□□ 0.09
TRIM23-206ENST00000508808 RNF216Q9NWF9 866 aaPredicted RBP15.55■□□□□ 0.08
TRIM23-206ENST00000508808 HOXD11P31277 338 aaPredicted RBP15.48■□□□□ 0.07
TRIM23-206ENST00000508808 DCAF8L1A6NGE4 600 aa15.19■□□□□ 0.02
TRIM23-206ENST00000508808 DNAJC5BQ9UF47 199 aa15.16■□□□□ 0.02
TRIM23-206ENST00000508808 SLC4A1APQ9BWU0 796 aaKnown RBP15.15■□□□□ 0.02
TRIM23-206ENST00000508808 POTEHQ6S545 545 aa15□□□□□ -0.01
TRIM23-206ENST00000508808 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.78□□□□□ -0.04
TRIM23-206ENST00000508808 SLC4A2P04920 1241 aa14.76□□□□□ -0.05
TRIM23-206ENST00000508808 RNF39Q9H2S5 420 aa14.76□□□□□ -0.05
TRIM23-206ENST00000508808 EHMT2Q96KQ7 1210 aa14.71□□□□□ -0.05
TRIM23-206ENST00000508808 FOXD4L1Q9NU39 408 aa14.65□□□□□ -0.06
TRIM23-206ENST00000508808 ZBTB22O15209 634 aa14.63□□□□□ -0.07
TRIM23-206ENST00000508808 U3KPZ7 1027 aaPredicted RBP14.54□□□□□ -0.08
TRIM23-206ENST00000508808 C1QBPQ07021 282 aaKnown RBP14.5□□□□□ -0.09
TRIM23-206ENST00000508808 CSRNP3Q8WYN3 585 aa14.49□□□□□ -0.09
TRIM23-206ENST00000508808 MYCNP04198 464 aaPredicted RBP14.47□□□□□ -0.09
TRIM23-206ENST00000508808 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.34□□□□□ -0.11
TRIM23-206ENST00000508808 HNRNPUL2Q1KMD3 747 aaKnown RBP14.34□□□□□ -0.11
TRIM23-206ENST00000508808 SAMD1Q6SPF0 538 aaPredicted RBP14.29□□□□□ -0.12
TRIM23-206ENST00000508808 APLP2Q06481 763 aa14.22□□□□□ -0.13
TRIM23-206ENST00000508808 SPINK5Q9NQ38 1064 aaPredicted RBP14.14□□□□□ -0.15
TRIM23-206ENST00000508808 ATXN8OSP0DMR3 200 aa14.11□□□□□ -0.15
TRIM23-206ENST00000508808 CAPN15O75808 1086 aa14.1□□□□□ -0.15
TRIM23-206ENST00000508808 ATF5Q9Y2D1 282 aaPredicted RBP14.06□□□□□ -0.16
TRIM23-206ENST00000508808 TRHP20396 242 aaPredicted RBP14.02□□□□□ -0.17
TRIM23-206ENST00000508808 ZNF219Q9P2Y4 722 aaPredicted RBP14.02□□□□□ -0.17
TRIM23-206ENST00000508808 ABCB7O75027 752 aa13.84□□□□□ -0.19
TRIM23-206ENST00000508808 DSG3P32926 999 aa13.84□□□□□ -0.19
TRIM23-206ENST00000508808 POLA2Q14181 598 aa13.76□□□□□ -0.21
TRIM23-206ENST00000508808 ZBTB12Q9Y330 459 aaPredicted RBP13.57□□□□□ -0.24
TRIM23-206ENST00000508808 FBLN2P98095 1184 aa13.5□□□□□ -0.25
TRIM23-206ENST00000508808 MKRN4PQ13434 485 aaPredicted RBP13.45□□□□□ -0.26
TRIM23-206ENST00000508808 SP7Q8TDD2 431 aaPredicted RBP13.37□□□□□ -0.27
TRIM23-206ENST00000508808 OSCARQ8IYS5 282 aa13.35□□□□□ -0.27
TRIM23-206ENST00000508808 RBM42Q9BTD8 480 aaKnown RBP13.22□□□□□ -0.29
TRIM23-206ENST00000508808 SPDYE2BA6NHP3 402 aa13.18□□□□□ -0.3
TRIM23-206ENST00000508808 SPDYE6P0CI01 402 aa13.18□□□□□ -0.3
TRIM23-206ENST00000508808 SPDYE2Q495Y8 402 aa13.18□□□□□ -0.3
TRIM23-206ENST00000508808 SPDYE4A6NLX3 237 aa13.15□□□□□ -0.3
TRIM23-206ENST00000508808 FKBP8Q14318 412 aa13.15□□□□□ -0.3
TRIM23-206ENST00000508808 ZNF692Q9BU19 519 aaPredicted RBP13.11□□□□□ -0.31
TRIM23-206ENST00000508808 SSUH2Q9Y2M2 353 aa13.08□□□□□ -0.32
TRIM23-206ENST00000508808 CHRDL2Q6WN34 429 aa13.06□□□□□ -0.32
TRIM23-206ENST00000508808 PLSCR2Q9NRY7 297 aa13.03□□□□□ -0.32
TRIM23-206ENST00000508808 AKT1S1Q96B36 256 aa13.02□□□□□ -0.33
TRIM23-206ENST00000508808 PABPN1Q86U42 306 aaKnown RBP eCLIP12.96□□□□□ -0.33
TRIM23-206ENST00000508808 PROM2Q8N271 834 aa12.91□□□□□ -0.34
TRIM23-206ENST00000508808 REM2Q8IYK8 340 aaPredicted RBP12.9□□□□□ -0.34
TRIM23-206ENST00000508808 SPDYE1Q8NFV5 336 aaPredicted RBP12.8□□□□□ -0.36
TRIM23-206ENST00000508808 PITPNM1O00562 1244 aa12.78□□□□□ -0.36
TRIM23-206ENST00000508808 CLEC11AQ9Y240 323 aa12.75□□□□□ -0.37
TRIM23-206ENST00000508808 STAG3Q9UJ98 1225 aa12.72□□□□□ -0.37
TRIM23-206ENST00000508808 FBXO3Q9UK99 471 aa12.67□□□□□ -0.38
TRIM23-206ENST00000508808 HAX1O00165 279 aa12.65□□□□□ -0.38
TRIM23-206ENST00000508808 PRR29P0C7W0 189 aa12.61□□□□□ -0.39
TRIM23-206ENST00000508808 LHX8Q68G74 356 aa12.55□□□□□ -0.4
TRIM23-206ENST00000508808 VASPP50552 380 aaPredicted RBP12.52□□□□□ -0.41
TRIM23-206ENST00000508808 FXR2P51116 673 aaKnown RBP eCLIP12.51□□□□□ -0.41
TRIM23-206ENST00000508808 PIP4P2Q8N4L2 257 aa12.5□□□□□ -0.41
TRIM23-206ENST00000508808 PLCD3Q8N3E9 789 aa12.46□□□□□ -0.41
TRIM23-206ENST00000508808 CREBZFQ9NS37 354 aa12.46□□□□□ -0.41
TRIM23-206ENST00000508808 PRKAR2AP13861 404 aaKnown RBP12.45□□□□□ -0.42
TRIM23-206ENST00000508808 EVX2Q03828 476 aa12.45□□□□□ -0.42
TRIM23-206ENST00000508808 MIER1Q8N108 512 aa12.45□□□□□ -0.42
TRIM23-206ENST00000508808 CHADLQ6NUI6 762 aa12.44□□□□□ -0.42
TRIM23-206ENST00000508808 PLEKHG5O94827 1062 aa12.42□□□□□ -0.42
TRIM23-206ENST00000508808 ZBTB47Q9UFB7 747 aaPredicted RBP12.32□□□□□ -0.44
TRIM23-206ENST00000508808 IFNLR1Q8IU57 520 aaPredicted RBP12.31□□□□□ -0.44
TRIM23-206ENST00000508808 FARP1Q9Y4F1 1045 aaPredicted RBP12.31□□□□□ -0.44
TRIM23-206ENST00000508808 MNX1P50219 401 aaPredicted RBP12.3□□□□□ -0.44
TRIM23-206ENST00000508808 KLHL34Q8N239 644 aa12.3□□□□□ -0.44
TRIM23-206ENST00000508808 NPM1P06748 294 aaKnown RBP eCLIP12.25□□□□□ -0.45
TRIM23-206ENST00000508808 SPOCK2Q92563 424 aa12.19□□□□□ -0.46
TRIM23-206ENST00000508808 NUBP1P53384 320 aa12.14□□□□□ -0.47
TRIM23-206ENST00000508808 RASEFQ8IZ41 740 aa12.12□□□□□ -0.47
TRIM23-206ENST00000508808 CD44P16070 742 aaKnown RBP12.1□□□□□ -0.47
TRIM23-206ENST00000508808 C19orf67A6NJJ6 358 aa12.09□□□□□ -0.47
TRIM23-206ENST00000508808 PAK3O75914 559 aaPredicted RBP12.08□□□□□ -0.48
TRIM23-206ENST00000508808 FAM212AQ96EL1 285 aa12.08□□□□□ -0.48
TRIM23-206ENST00000508808 TSPYL2Q9H2G4 693 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms