RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 DEFB131AP59861 70 aa7.69□□□□□ -1.18
TPM3-217ENST00000504663 HIST1H1AQ02539 215 aaPredicted RBP7.69□□□□□ -1.18
TPM3-217ENST00000504663 BTN1A1Q13410 526 aa7.69□□□□□ -1.18
TPM3-217ENST00000504663 FOXI2Q6ZQN5 318 aa7.69□□□□□ -1.18
TPM3-217ENST00000504663 Q6ZQT7 251 aa7.69□□□□□ -1.18
TPM3-217ENST00000504663 RBPMS2Q6ZRY4 209 aaKnown RBP7.69□□□□□ -1.18
TPM3-217ENST00000504663 NUDT10Q8NFP7 164 aa7.69□□□□□ -1.18
TPM3-217ENST00000504663 TMEM158Q8WZ71 300 aa7.69□□□□□ -1.18
TPM3-217ENST00000504663 NUDT11Q96G61 164 aa7.69□□□□□ -1.18
TPM3-217ENST00000504663 TMEM242Q9NWH2 141 aa7.69□□□□□ -1.18
TPM3-217ENST00000504663 C11orf21Q9P2W6 132 aa7.69□□□□□ -1.18
TPM3-217ENST00000504663 LENEPQ9Y5L5 61 aa7.69□□□□□ -1.18
TPM3-217ENST00000504663 TRBV7-9A0A0J9YWB2 115 aa7.68□□□□□ -1.18
TPM3-217ENST00000504663 OR4C46A6NHA9 309 aa7.68□□□□□ -1.18
TPM3-217ENST00000504663 KNCNA6PVL3 124 aa7.68□□□□□ -1.18
TPM3-217ENST00000504663 KLLNB2CW77 178 aa7.68□□□□□ -1.18
TPM3-217ENST00000504663 PFN1P07737 140 aaKnown RBP7.68□□□□□ -1.18
TPM3-217ENST00000504663 MGST1P10620 155 aaKnown RBP7.68□□□□□ -1.18
TPM3-217ENST00000504663 HLA-DRB4P13762 266 aa7.68□□□□□ -1.18
TPM3-217ENST00000504663 SNRPD3P62318 126 aaKnown RBP7.68□□□□□ -1.18
TPM3-217ENST00000504663 SHISA2Q6UWI4 295 aa7.68□□□□□ -1.18
TPM3-217ENST00000504663 LURAP1LQ8IV03 231 aa7.68□□□□□ -1.18
TPM3-217ENST00000504663 OR10G8Q8NGN5 311 aa7.68□□□□□ -1.18
TPM3-217ENST00000504663 LINC00477Q96M19 166 aa7.68□□□□□ -1.18
TPM3-217ENST00000504663 ODF3Q96PU9 254 aa7.68□□□□□ -1.18
TPM3-217ENST00000504663 CTDSP1Q9GZU7 261 aa7.68□□□□□ -1.18
TPM3-217ENST00000504663 TUBA4BQ9H853 241 aa7.68□□□□□ -1.18
TPM3-217ENST00000504663 HLA-DRB4X5D2U9 266 aa7.68□□□□□ -1.18
TPM3-217ENST00000504663 DNHD1Q96M86 4753 aa7.67□□□□□ -1.18
TPM3-217ENST00000504663 COLCA2A8K830 154 aa7.67□□□□□ -1.18
TPM3-217ENST00000504663 H3BMM0 161 aa7.67□□□□□ -1.18
TPM3-217ENST00000504663 SH2D1AO60880 128 aa7.67□□□□□ -1.18
TPM3-217ENST00000504663 CA1P00915 261 aaPredicted RBP7.67□□□□□ -1.18
TPM3-217ENST00000504663 MT-ND4LP03901 98 aa7.67□□□□□ -1.18
TPM3-217ENST00000504663 CD7P09564 240 aa7.67□□□□□ -1.18
TPM3-217ENST00000504663 PAFAH1B2P68402 229 aa7.67□□□□□ -1.18
TPM3-217ENST00000504663 ELOBQ15370 118 aa7.67□□□□□ -1.18
TPM3-217ENST00000504663 SAPCD1Q5SSQ6 148 aa7.67□□□□□ -1.18
TPM3-217ENST00000504663 IBA57Q5T440 356 aaKnown RBP7.67□□□□□ -1.18
TPM3-217ENST00000504663 TMEM78Q5T7P6 136 aa7.67□□□□□ -1.18
TPM3-217ENST00000504663 PRR27Q6MZM9 219 aa7.67□□□□□ -1.18
TPM3-217ENST00000504663 C12orf54Q6X4T0 127 aa7.67□□□□□ -1.18
TPM3-217ENST00000504663 PYGO2Q9BRQ0 406 aa7.67□□□□□ -1.18
TPM3-217ENST00000504663 WFDC10AQ9H1F0 79 aa7.67□□□□□ -1.18
TPM3-217ENST00000504663 PKD1L1Q8TDX9 2849 aa7.66□□□□□ -1.18
TPM3-217ENST00000504663 H7BYZ3 331 aa7.66□□□□□ -1.18
TPM3-217ENST00000504663 CXCL1P09341 107 aa7.66□□□□□ -1.18
TPM3-217ENST00000504663 RBMY1A1P0DJD3 496 aaKnown RBP7.66□□□□□ -1.18
TPM3-217ENST00000504663 RBMY1CP0DJD4 496 aa7.66□□□□□ -1.18
TPM3-217ENST00000504663 ERVFC1-1P60608 527 aa7.66□□□□□ -1.18
TPM3-217ENST00000504663 RPL19P84098 196 aaKnown RBP7.66□□□□□ -1.18
TPM3-217ENST00000504663 RBMY1FQ15415 496 aaKnown RBP7.66□□□□□ -1.18
TPM3-217ENST00000504663 C9orf66Q5T8R8 295 aa7.66□□□□□ -1.18
TPM3-217ENST00000504663 OR10J6PQ8NGY7 276 aa7.66□□□□□ -1.18
TPM3-217ENST00000504663 FAM110AQ9BQ89 295 aa7.66□□□□□ -1.18
TPM3-217ENST00000504663 SMCO4Q9NRQ5 59 aa7.66□□□□□ -1.18
TPM3-217ENST00000504663 SMIM27A0A1W2PRY6 76 aa7.65□□□□□ -1.18
TPM3-217ENST00000504663 CXorf65A6NEN9 183 aa7.65□□□□□ -1.18
TPM3-217ENST00000504663 PPP1R2P9O14990 202 aa7.65□□□□□ -1.18
TPM3-217ENST00000504663 CRXO43186 299 aaPredicted RBP7.65□□□□□ -1.18
TPM3-217ENST00000504663 IGLL1P15814 213 aa7.65□□□□□ -1.18
TPM3-217ENST00000504663 INSL3P51460 131 aa7.65□□□□□ -1.18
TPM3-217ENST00000504663 SMUG1Q53HV7 270 aa7.65□□□□□ -1.18
TPM3-217ENST00000504663 Q6AWC8 147 aa7.65□□□□□ -1.18
TPM3-217ENST00000504663 TRPT1Q86TN4 253 aaKnown RBP7.65□□□□□ -1.18
TPM3-217ENST00000504663 Q8N1Y9 231 aa7.65□□□□□ -1.18
TPM3-217ENST00000504663 C3orf56Q8N813 242 aa7.65□□□□□ -1.18
TPM3-217ENST00000504663 GTSF1Q8WW33 167 aa7.65□□□□□ -1.18
TPM3-217ENST00000504663 RPP21Q9H633 154 aaKnown RBP7.65□□□□□ -1.18
TPM3-217ENST00000504663 IL36BQ9NZH7 164 aa7.65□□□□□ -1.18
TPM3-217ENST00000504663 NOTCH3Q9UM47 2321 aa7.64□□□□□ -1.19
TPM3-217ENST00000504663 TGIF2-C20orf24A0A0A6YYL0 155 aa7.64□□□□□ -1.19
TPM3-217ENST00000504663 IGKV3D-20A0A0C4DH25 116 aa7.64□□□□□ -1.19
TPM3-217ENST00000504663 GATCO43716 136 aaKnown RBP7.64□□□□□ -1.19
TPM3-217ENST00000504663 ACTL10Q5JWF8 245 aa7.64□□□□□ -1.19
TPM3-217ENST00000504663 FAM162BQ5T6X4 162 aa7.64□□□□□ -1.19
TPM3-217ENST00000504663 GFI1BQ5VTD9 330 aa7.64□□□□□ -1.19
TPM3-217ENST00000504663 OR4B1Q8NGF8 309 aa7.64□□□□□ -1.19
TPM3-217ENST00000504663 IMMP2LQ96T52 175 aa7.64□□□□□ -1.19
TPM3-217ENST00000504663 NDFIP1Q9BT67 221 aa7.64□□□□□ -1.19
TPM3-217ENST00000504663 TRBV24-1A0A075B6N3 115 aa7.63□□□□□ -1.19
TPM3-217ENST00000504663 ZNF705GA8MUZ8 300 aaPredicted RBP7.63□□□□□ -1.19
TPM3-217ENST00000504663 OR11H12B2RN74 326 aa7.63□□□□□ -1.19
TPM3-217ENST00000504663 M0R2Z0 102 aa7.63□□□□□ -1.19
TPM3-217ENST00000504663 ZNF324O75467 553 aaPredicted RBP7.63□□□□□ -1.19
TPM3-217ENST00000504663 DUSP14O95147 198 aaKnown RBP7.63□□□□□ -1.19
TPM3-217ENST00000504663 GIG44P09565 113 aaPredicted RBP7.63□□□□□ -1.19
TPM3-217ENST00000504663 FRMD6-AS1P0C7T7 363 aa7.63□□□□□ -1.19
TPM3-217ENST00000504663 GZMBP10144 247 aa7.63□□□□□ -1.19
TPM3-217ENST00000504663 FAM3BP58499 235 aaPredicted RBP7.63□□□□□ -1.19
TPM3-217ENST00000504663 EBLN2Q6P2I7 272 aa7.63□□□□□ -1.19
TPM3-217ENST00000504663 C15orf54Q8N8G6 183 aa7.63□□□□□ -1.19
TPM3-217ENST00000504663 NEU1Q99519 415 aa7.63□□□□□ -1.19
TPM3-217ENST00000504663 BIN3Q9NQY0 253 aa7.63□□□□□ -1.19
TPM3-217ENST00000504663 AP5S1Q9NUS5 200 aa7.63□□□□□ -1.19
TPM3-217ENST00000504663 URGCP-MRPS24S4R325 110 aa7.63□□□□□ -1.19
TPM3-217ENST00000504663 PHOX2AO14813 284 aa7.62□□□□□ -1.19
TPM3-217ENST00000504663 IGKV3-20P01619 116 aa7.62□□□□□ -1.19
TPM3-217ENST00000504663 P01737 135 aa7.62□□□□□ -1.19
TPM3-217ENST00000504663 IGLC6P0CF74 106 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms