RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 SIRPDQ9H106 197 aa15.25■□□□□ 0.03
NKX2-1-202ENST00000498187 PRSS1P07477 247 aa15.24■□□□□ 0.03
NKX2-1-202ENST00000498187 ODF1Q14990 250 aa15.24■□□□□ 0.03
NKX2-1-202ENST00000498187 ECSCRQ19T08 205 aa15.23■□□□□ 0.03
NKX2-1-202ENST00000498187 C15orf32Q32M92 178 aa15.23■□□□□ 0.03
NKX2-1-202ENST00000498187 NEGR1Q7Z3B1 354 aa15.23■□□□□ 0.03
NKX2-1-202ENST00000498187 DTX2Q86UW9 622 aa15.23■□□□□ 0.03
NKX2-1-202ENST00000498187 SMPXQ9UHP9 88 aa15.23■□□□□ 0.03
NKX2-1-202ENST00000498187 TMEM95Q3KNT9 176 aa15.23■□□□□ 0.03
NKX2-1-202ENST00000498187 HHLA3Q9XRX5 114 aa15.23■□□□□ 0.03
NKX2-1-202ENST00000498187 IGKCP01834 107 aa15.22■□□□□ 0.03
NKX2-1-202ENST00000498187 SAMD5Q5TGI4 173 aa15.22■□□□□ 0.03
NKX2-1-202ENST00000498187 FAM110DQ8TAY7 271 aaPredicted RBP15.22■□□□□ 0.03
NKX2-1-202ENST00000498187 ZNF502Q8TBZ5 544 aa15.22■□□□□ 0.03
NKX2-1-202ENST00000498187 A0A1W2PPR1 153 aa15.22■□□□□ 0.03
NKX2-1-202ENST00000498187 ERCC8Q13216 396 aa15.22■□□□□ 0.03
NKX2-1-202ENST00000498187 ATP5LO75964 103 aa15.21■□□□□ 0.03
NKX2-1-202ENST00000498187 EVI2AP22794 236 aa15.21■□□□□ 0.03
NKX2-1-202ENST00000498187 GCSHP23434 173 aa15.21■□□□□ 0.03
NKX2-1-202ENST00000498187 ZFAND3Q9H8U3 227 aa15.21■□□□□ 0.03
NKX2-1-202ENST00000498187 ACACBO00763 2458 aa15.21■□□□□ 0.02
NKX2-1-202ENST00000498187 PRAC2D3DTV9 90 aa15.21■□□□□ 0.02
NKX2-1-202ENST00000498187 ATP6V0E1O15342 81 aa15.21■□□□□ 0.02
NKX2-1-202ENST00000498187 SELENOKQ9Y6D0 94 aa15.21■□□□□ 0.02
NKX2-1-202ENST00000498187 CLEC3BP05452 202 aa15.2■□□□□ 0.02
NKX2-1-202ENST00000498187 RIPPLY3P57055 190 aa15.2■□□□□ 0.02
NKX2-1-202ENST00000498187 PSMG3-AS1Q96PY0 264 aa15.2■□□□□ 0.02
NKX2-1-202ENST00000498187 MED13LQ71F56 2210 aa15.2■□□□□ 0.02
NKX2-1-202ENST00000498187 IGKV2D-26A0A0A0MRZ7 120 aa15.2■□□□□ 0.02
NKX2-1-202ENST00000498187 GAS8-AS1O95177 125 aa15.2■□□□□ 0.02
NKX2-1-202ENST00000498187 TM4SF20Q53R12 229 aa15.2■□□□□ 0.02
NKX2-1-202ENST00000498187 RNF182Q8N6D2 247 aa15.2■□□□□ 0.02
NKX2-1-202ENST00000498187 Q8N8P6 123 aa15.2■□□□□ 0.02
NKX2-1-202ENST00000498187 AJUBAQ96IF1 538 aa15.2■□□□□ 0.02
NKX2-1-202ENST00000498187 CHAC1Q9BUX1 264 aa15.2■□□□□ 0.02
NKX2-1-202ENST00000498187 RBAKDNA6NC62 111 aa15.19■□□□□ 0.02
NKX2-1-202ENST00000498187 BUB3O43684 328 aa15.19■□□□□ 0.02
NKX2-1-202ENST00000498187 DPM2O94777 84 aa15.19■□□□□ 0.02
NKX2-1-202ENST00000498187 SMIM17P0DL12 118 aa15.19■□□□□ 0.02
NKX2-1-202ENST00000498187 RAB9AP51151 201 aa15.19■□□□□ 0.02
NKX2-1-202ENST00000498187 PKD1L2Q7Z442 2459 aa15.19■□□□□ 0.02
NKX2-1-202ENST00000498187 IGHV3-66A0A0C4DH42 116 aa15.18■□□□□ 0.02
NKX2-1-202ENST00000498187 UBE2E1P51965 193 aa15.18■□□□□ 0.02
NKX2-1-202ENST00000498187 TMEM158Q8WZ71 300 aa15.18■□□□□ 0.02
NKX2-1-202ENST00000498187 FOXC2Q99958 501 aa15.18■□□□□ 0.02
NKX2-1-202ENST00000498187 FXYD2P54710 66 aa15.18■□□□□ 0.02
NKX2-1-202ENST00000498187 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.18■□□□□ 0.02
NKX2-1-202ENST00000498187 HLA-DRB4P13762 266 aa15.17■□□□□ 0.02
NKX2-1-202ENST00000498187 SAA4P35542 130 aa15.17■□□□□ 0.02
NKX2-1-202ENST00000498187 HLA-DRB4X5D2U9 266 aa15.17■□□□□ 0.02
NKX2-1-202ENST00000498187 GOSR1O95249 250 aa15.17■□□□□ 0.02
NKX2-1-202ENST00000498187 CCDC140Q96MF4 163 aa15.17■□□□□ 0.02
NKX2-1-202ENST00000498187 TRBV25-1A0A075B6N4 114 aa15.16■□□□□ 0.02
NKX2-1-202ENST00000498187 G3V318 75 aa15.16■□□□□ 0.02
NKX2-1-202ENST00000498187 ZC2HC1BQ5TFG8 222 aa15.16■□□□□ 0.02
NKX2-1-202ENST00000498187 CLEC19AQ6UXS0 136 aa15.16■□□□□ 0.02
NKX2-1-202ENST00000498187 IL17RELQ6ZVW7 336 aa15.16■□□□□ 0.02
NKX2-1-202ENST00000498187 IGHV3OR16-13A0A075B7E8 117 aa15.16■□□□□ 0.02
NKX2-1-202ENST00000498187 IGHV3-74A0A0B4J1X5 117 aa15.16■□□□□ 0.02
NKX2-1-202ENST00000498187 CLPSL1A2RUU4 121 aa15.16■□□□□ 0.02
NKX2-1-202ENST00000498187 LINC01548A6NM66 108 aa15.16■□□□□ 0.02
NKX2-1-202ENST00000498187 PPIFP30405 207 aaKnown RBP15.16■□□□□ 0.02
NKX2-1-202ENST00000498187 GTSCR1Q86UQ5 136 aa15.16■□□□□ 0.02
NKX2-1-202ENST00000498187 SLC50A1Q9BRV3 221 aa15.16■□□□□ 0.02
NKX2-1-202ENST00000498187 TMEM8BA6NDV4 472 aa15.15■□□□□ 0.02
NKX2-1-202ENST00000498187 GATA1P15976 413 aaPredicted RBP15.15■□□□□ 0.02
NKX2-1-202ENST00000498187 SRSF1Q07955 248 aaKnown RBP eCLIP15.15■□□□□ 0.02
NKX2-1-202ENST00000498187 KLK9Q2XQG4 91 aa15.15■□□□□ 0.02
NKX2-1-202ENST00000498187 MYOZ3Q8TDC0 251 aa15.15■□□□□ 0.02
NKX2-1-202ENST00000498187 TM2D2Q9BX73 214 aa15.15■□□□□ 0.02
NKX2-1-202ENST00000498187 TTTY13Q9BZ97 58 aa15.15■□□□□ 0.02
NKX2-1-202ENST00000498187 KLK9Q9UKQ9 250 aa15.15■□□□□ 0.02
NKX2-1-202ENST00000498187 IGLV2-18A0A075B6J9 118 aa15.15■□□□□ 0.02
NKX2-1-202ENST00000498187 UBTD1Q9HAC8 227 aa15.15■□□□□ 0.02
NKX2-1-202ENST00000498187 CEND1Q8N111 149 aa15.14■□□□□ 0.01
NKX2-1-202ENST00000498187 COL6A6A6NMZ7 2263 aa15.14■□□□□ 0.01
NKX2-1-202ENST00000498187 TMEM160Q9NX00 188 aa15.14■□□□□ 0.01
NKX2-1-202ENST00000498187 IGHV3-49A0A0A0MS15 119 aa15.13■□□□□ 0.01
NKX2-1-202ENST00000498187 IGKV3D-20A0A0C4DH25 116 aa15.13■□□□□ 0.01
NKX2-1-202ENST00000498187 LAGE3Q14657 143 aa15.13■□□□□ 0.01
NKX2-1-202ENST00000498187 CIDEAO60543 219 aa15.12■□□□□ 0.01
NKX2-1-202ENST00000498187 EEF1AKMT3Q96AZ1 226 aa15.12■□□□□ 0.01
NKX2-1-202ENST00000498187 AGPAT4-IT1Q9H0P7 198 aa15.12■□□□□ 0.01
NKX2-1-202ENST00000498187 TRAV40A0A0B4J280 105 aa15.12■□□□□ 0.01
NKX2-1-202ENST00000498187 TMEM238C9JI98 176 aa15.12■□□□□ 0.01
NKX2-1-202ENST00000498187 ZNF207O43670 478 aaKnown RBP15.12■□□□□ 0.01
NKX2-1-202ENST00000498187 PHLDA1Q8WV24 401 aaPredicted RBP15.12■□□□□ 0.01
NKX2-1-202ENST00000498187 SPTBN1Q01082 2364 aaKnown RBP15.11■□□□□ 0.01
NKX2-1-202ENST00000498187 CENPVL3A0A0U1RRI6 287 aa15.11■□□□□ 0.01
NKX2-1-202ENST00000498187 EFNA4P52798 201 aa15.11■□□□□ 0.01
NKX2-1-202ENST00000498187 NHP2Q9NX24 153 aaKnown RBP15.11■□□□□ 0.01
NKX2-1-202ENST00000498187 CACNA1BQ00975 2339 aa15.11■□□□□ 0.01
NKX2-1-202ENST00000498187 TAL2Q16559 108 aa15.11■□□□□ 0.01
NKX2-1-202ENST00000498187 TMEM78Q5T7P6 136 aa15.11■□□□□ 0.01
NKX2-1-202ENST00000498187 BPESC1Q9GZL8 116 aa15.11■□□□□ 0.01
NKX2-1-202ENST00000498187 MRPL35Q9NZE8 188 aaKnown RBP15.11■□□□□ 0.01
NKX2-1-202ENST00000498187 TRAV8-2A0A0B4J237 113 aa15.1■□□□□ 0.01
NKX2-1-202ENST00000498187 K7ERJ3 54 aa15.1■□□□□ 0.01
NKX2-1-202ENST00000498187 TRGV3P03979 118 aa15.1■□□□□ 0.01
NKX2-1-202ENST00000498187 LMO4P61968 165 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms