RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 SPATA3Q8NHX4 192 aa8.19□□□□□ -1.1
PKP4-215ENST00000494945 NUDT11Q96G61 164 aa8.19□□□□□ -1.1
PKP4-215ENST00000494945 CLUHP3Q96NS8 147 aa8.19□□□□□ -1.1
PKP4-215ENST00000494945 V9GYV3 84 aa8.19□□□□□ -1.1
PKP4-215ENST00000494945 FABP5P3A8MUU1 101 aa8.18□□□□□ -1.1
PKP4-215ENST00000494945 ZNF705GA8MUZ8 300 aaPredicted RBP8.18□□□□□ -1.1
PKP4-215ENST00000494945 H3BMM0 161 aa8.18□□□□□ -1.1
PKP4-215ENST00000494945 S100PP25815 95 aa8.18□□□□□ -1.1
PKP4-215ENST00000494945 TSPOP30536 169 aa8.18□□□□□ -1.1
PKP4-215ENST00000494945 CRIP1P50238 77 aa8.18□□□□□ -1.1
PKP4-215ENST00000494945 CT83Q5H943 113 aa8.18□□□□□ -1.1
PKP4-215ENST00000494945 ACTL10Q5JWF8 245 aa8.18□□□□□ -1.1
PKP4-215ENST00000494945 LINC00322Q6ZN03 302 aaPredicted RBP8.18□□□□□ -1.1
PKP4-215ENST00000494945 LURAP1LQ8IV03 231 aa8.18□□□□□ -1.1
PKP4-215ENST00000494945 APRG1Q8IVJ8 170 aa8.18□□□□□ -1.1
PKP4-215ENST00000494945 ZFAND2AQ8N6M9 145 aa8.18□□□□□ -1.1
PKP4-215ENST00000494945 RPP21Q9H633 154 aaKnown RBP8.18□□□□□ -1.1
PKP4-215ENST00000494945 NOTCH3Q9UM47 2321 aa8.18□□□□□ -1.1
PKP4-215ENST00000494945 KNCNA6PVL3 124 aa8.17□□□□□ -1.1
PKP4-215ENST00000494945 KLLNB2CW77 178 aa8.17□□□□□ -1.1
PKP4-215ENST00000494945 SH2D1AO60880 128 aa8.17□□□□□ -1.1
PKP4-215ENST00000494945 GPX1P07203 203 aa8.17□□□□□ -1.1
PKP4-215ENST00000494945 PFN1P07737 140 aaKnown RBP8.17□□□□□ -1.1
PKP4-215ENST00000494945 ZNF80P51504 273 aaPredicted RBP8.17□□□□□ -1.1
PKP4-215ENST00000494945 KCNIP4Q6PIL6 250 aa8.17□□□□□ -1.1
PKP4-215ENST00000494945 IL36BQ9NZH7 164 aa8.17□□□□□ -1.1
PKP4-215ENST00000494945 TRAV9-1A0A075B6T8 112 aa8.16□□□□□ -1.1
PKP4-215ENST00000494945 A8MWL6 223 aa8.16□□□□□ -1.1
PKP4-215ENST00000494945 IGLL1P15814 213 aa8.16□□□□□ -1.1
PKP4-215ENST00000494945 ZNF124Q15973 351 aa8.16□□□□□ -1.1
PKP4-215ENST00000494945 PRR31Q5SQ13 230 aa8.16□□□□□ -1.1
PKP4-215ENST00000494945 AMTNQ6UX39 209 aa8.16□□□□□ -1.1
PKP4-215ENST00000494945 BTF3L4Q96K17 158 aa8.16□□□□□ -1.1
PKP4-215ENST00000494945 TRAV21A0A0B4J279 112 aa8.15□□□□□ -1.1
PKP4-215ENST00000494945 SMIM27A0A1W2PRY6 76 aa8.15□□□□□ -1.1
PKP4-215ENST00000494945 XKRY2A2RUG3 117 aa8.15□□□□□ -1.1
PKP4-215ENST00000494945 FAM231BA6NCW3 169 aa8.15□□□□□ -1.1
PKP4-215ENST00000494945 IGKV3-20P01619 116 aa8.15□□□□□ -1.1
PKP4-215ENST00000494945 CD7P09564 240 aa8.15□□□□□ -1.1
PKP4-215ENST00000494945 CDKN1BP46527 198 aa8.15□□□□□ -1.1
PKP4-215ENST00000494945 RPS20P60866 119 aaKnown RBP8.15□□□□□ -1.1
PKP4-215ENST00000494945 ELOBQ15370 118 aa8.15□□□□□ -1.1
PKP4-215ENST00000494945 LINC01559Q495D7 138 aa8.15□□□□□ -1.1
PKP4-215ENST00000494945 PRR9Q5T870 116 aa8.15□□□□□ -1.1
PKP4-215ENST00000494945 Q6AWC8 147 aa8.15□□□□□ -1.1
PKP4-215ENST00000494945 GTSCR1Q86UQ5 136 aa8.15□□□□□ -1.1
PKP4-215ENST00000494945 STHQ8IWL8 128 aa8.15□□□□□ -1.1
PKP4-215ENST00000494945 OR2D3Q8NGH3 330 aa8.15□□□□□ -1.1
PKP4-215ENST00000494945 TSKUQ8WUA8 353 aa8.15□□□□□ -1.1
PKP4-215ENST00000494945 YPEL4Q96NS1 127 aa8.15□□□□□ -1.1
PKP4-215ENST00000494945 GFRA4Q9GZZ7 299 aa8.15□□□□□ -1.1
PKP4-215ENST00000494945 C19orf73Q9NVV2 129 aa8.15□□□□□ -1.1
PKP4-215ENST00000494945 TRBV24-1A0A075B6N3 115 aa8.14□□□□□ -1.11
PKP4-215ENST00000494945 C7orf71A4D174 169 aa8.14□□□□□ -1.11
PKP4-215ENST00000494945 TMEM189A5PLL7 270 aa8.14□□□□□ -1.11
PKP4-215ENST00000494945 AMBPP02760 352 aa8.14□□□□□ -1.11
PKP4-215ENST00000494945 RNASE4P34096 147 aaKnown RBP8.14□□□□□ -1.11
PKP4-215ENST00000494945 TRPT1Q86TN4 253 aaKnown RBP8.14□□□□□ -1.11
PKP4-215ENST00000494945 URGCP-MRPS24S4R325 110 aa8.14□□□□□ -1.11
PKP4-215ENST00000494945 RBMY1BA6NDE4 496 aaKnown RBP8.13□□□□□ -1.11
PKP4-215ENST00000494945 RBMY1EA6NEQ0 496 aaKnown RBP8.13□□□□□ -1.11
PKP4-215ENST00000494945 COLCA2A8K830 154 aa8.13□□□□□ -1.11
PKP4-215ENST00000494945 J3KRW8 73 aa8.13□□□□□ -1.11
PKP4-215ENST00000494945 M0R2Z0 102 aa8.13□□□□□ -1.11
PKP4-215ENST00000494945 CA1P00915 261 aaPredicted RBP8.13□□□□□ -1.11
PKP4-215ENST00000494945 ORM1P02763 201 aa8.13□□□□□ -1.11
PKP4-215ENST00000494945 CXCL1P09341 107 aa8.13□□□□□ -1.11
PKP4-215ENST00000494945 RBMY1DP0C7P1 496 aaKnown RBP8.13□□□□□ -1.11
PKP4-215ENST00000494945 RPL19P84098 196 aaKnown RBP8.13□□□□□ -1.11
PKP4-215ENST00000494945 SPINK13Q1W4C9 94 aa8.13□□□□□ -1.11
PKP4-215ENST00000494945 GFI1BQ5VTD9 330 aa8.13□□□□□ -1.11
PKP4-215ENST00000494945 PYGO2Q9BRQ0 406 aa8.13□□□□□ -1.11
PKP4-215ENST00000494945 ZMAT5Q9UDW3 170 aaKnown RBP8.13□□□□□ -1.11
PKP4-215ENST00000494945 NAT8BQ9UHF3 227 aa8.13□□□□□ -1.11
PKP4-215ENST00000494945 PKD1L1Q8TDX9 2849 aa8.12□□□□□ -1.11
PKP4-215ENST00000494945 A0A1W2PPQ1 181 aa8.12□□□□□ -1.11
PKP4-215ENST00000494945 FOXA3P55318 350 aaPredicted RBP8.12□□□□□ -1.11
PKP4-215ENST00000494945 RIPPLY3P57055 190 aa8.12□□□□□ -1.11
PKP4-215ENST00000494945 FAM3BP58499 235 aaPredicted RBP8.12□□□□□ -1.11
PKP4-215ENST00000494945 KIR3DS1Q14943 382 aa8.12□□□□□ -1.11
PKP4-215ENST00000494945 NEU1Q99519 415 aa8.12□□□□□ -1.11
PKP4-215ENST00000494945 MDFIQ99750 246 aa8.12□□□□□ -1.11
PKP4-215ENST00000494945 C20orf144Q9BQM9 153 aa8.12□□□□□ -1.11
PKP4-215ENST00000494945 MUC4Q99102 2169 aa8.12□□□□□ -1.11
PKP4-215ENST00000494945 TGIF2-C20orf24A0A0A6YYL0 155 aa8.11□□□□□ -1.11
PKP4-215ENST00000494945 TRAV12-3A0A0B4J271 114 aa8.11□□□□□ -1.11
PKP4-215ENST00000494945 IGKV3D-20A0A0C4DH25 116 aa8.11□□□□□ -1.11
PKP4-215ENST00000494945 HIGD1CA8MV81 97 aa8.11□□□□□ -1.11
PKP4-215ENST00000494945 ZNF324O75467 553 aaPredicted RBP8.11□□□□□ -1.11
PKP4-215ENST00000494945 TYMSP04818 313 aa8.11□□□□□ -1.11
PKP4-215ENST00000494945 TCL1AP56279 114 aa8.11□□□□□ -1.11
PKP4-215ENST00000494945 NUTF2P61970 127 aaKnown RBP8.11□□□□□ -1.11
PKP4-215ENST00000494945 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.11□□□□□ -1.11
PKP4-215ENST00000494945 NUP35Q8NFH5 326 aa8.11□□□□□ -1.11
PKP4-215ENST00000494945 GTSF1Q8WW33 167 aa8.11□□□□□ -1.11
PKP4-215ENST00000494945 KCNS1Q96KK3 526 aa8.11□□□□□ -1.11
PKP4-215ENST00000494945 FAM210BQ96KR6 192 aa8.11□□□□□ -1.11
PKP4-215ENST00000494945 WFDC10AQ9H1F0 79 aa8.11□□□□□ -1.11
PKP4-215ENST00000494945 C11orf21Q9P2W6 132 aa8.11□□□□□ -1.11
PKP4-215ENST00000494945 TRRAPQ9Y4A5 3859 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms