RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 IQCF2Q8IXL9 164 aa10.49□□□□□ -0.73
COL2A1-207ENST00000490609 PHYHIPLQ96FC7 376 aa10.49□□□□□ -0.73
COL2A1-207ENST00000490609 RGS13O14921 159 aa10.48□□□□□ -0.73
COL2A1-207ENST00000490609 ERVFC1-1P60608 527 aa10.48□□□□□ -0.73
COL2A1-207ENST00000490609 S100A10P60903 97 aa10.48□□□□□ -0.73
COL2A1-207ENST00000490609 MRPL23Q16540 153 aaKnown RBP10.48□□□□□ -0.73
COL2A1-207ENST00000490609 ATP6V1FQ16864 119 aa10.48□□□□□ -0.73
COL2A1-207ENST00000490609 THAP6Q8TBB0 222 aa10.48□□□□□ -0.73
COL2A1-207ENST00000490609 LRP1Q07954 4544 aaKnown RBP10.47□□□□□ -0.73
COL2A1-207ENST00000490609 E5RGE8 158 aa10.47□□□□□ -0.73
COL2A1-207ENST00000490609 H0YIZ8 118 aa10.47□□□□□ -0.73
COL2A1-207ENST00000490609 SMR3BP02814 79 aaPredicted RBP10.47□□□□□ -0.73
COL2A1-207ENST00000490609 OR10J4P0C629 311 aa10.47□□□□□ -0.73
COL2A1-207ENST00000490609 ZNF138P52744 262 aa10.47□□□□□ -0.73
COL2A1-207ENST00000490609 ZNF266Q14584 549 aa10.47□□□□□ -0.73
COL2A1-207ENST00000490609 MUC21Q5SSG8 566 aa10.47□□□□□ -0.73
COL2A1-207ENST00000490609 TMEM78Q5T7P6 136 aa10.47□□□□□ -0.73
COL2A1-207ENST00000490609 NEGR1Q7Z3B1 354 aa10.47□□□□□ -0.73
COL2A1-207ENST00000490609 OR10G4Q8NGN3 311 aa10.47□□□□□ -0.73
COL2A1-207ENST00000490609 RASL10AQ92737 203 aa10.47□□□□□ -0.73
COL2A1-207ENST00000490609 OR51M1Q9H341 326 aa10.47□□□□□ -0.73
COL2A1-207ENST00000490609 GPN1Q9HCN4 374 aaPredicted RBP10.47□□□□□ -0.73
COL2A1-207ENST00000490609 TRBV7-9A0A0J9YWB2 115 aa10.46□□□□□ -0.73
COL2A1-207ENST00000490609 H2AFB2P0C5Z0 115 aa10.46□□□□□ -0.73
COL2A1-207ENST00000490609 PVALBP20472 110 aaPredicted RBP10.46□□□□□ -0.73
COL2A1-207ENST00000490609 HBG1P69891 147 aa10.46□□□□□ -0.73
COL2A1-207ENST00000490609 HBG2P69892 147 aa10.46□□□□□ -0.73
COL2A1-207ENST00000490609 SLAQ13239 276 aa10.46□□□□□ -0.73
COL2A1-207ENST00000490609 AAMDCQ9H7C9 122 aa10.46□□□□□ -0.73
COL2A1-207ENST00000490609 LY96Q9Y6Y9 160 aa10.46□□□□□ -0.73
COL2A1-207ENST00000490609 LOC100131303A0A0U1RQF7 123 aa10.45□□□□□ -0.74
COL2A1-207ENST00000490609 LRCOL1A6NCL2 159 aa10.45□□□□□ -0.74
COL2A1-207ENST00000490609 HAMPP81172 84 aa10.45□□□□□ -0.74
COL2A1-207ENST00000490609 Q6AWC8 147 aa10.45□□□□□ -0.74
COL2A1-207ENST00000490609 NFE4Q86UQ8 179 aa10.45□□□□□ -0.74
COL2A1-207ENST00000490609 STX12Q86Y82 276 aa10.45□□□□□ -0.74
COL2A1-207ENST00000490609 OR5C1Q8NGR4 320 aa10.45□□□□□ -0.74
COL2A1-207ENST00000490609 PAXXQ9BUH6 204 aa10.45□□□□□ -0.74
COL2A1-207ENST00000490609 OR5AC2Q9NZP5 309 aa10.45□□□□□ -0.74
COL2A1-207ENST00000490609 MSRB1Q9NZV6 116 aa10.45□□□□□ -0.74
COL2A1-207ENST00000490609 SIX6O95475 246 aa10.44□□□□□ -0.74
COL2A1-207ENST00000490609 GYPEP15421 78 aa10.44□□□□□ -0.74
COL2A1-207ENST00000490609 ZNF415Q09FC8 603 aa10.44□□□□□ -0.74
COL2A1-207ENST00000490609 FAT3Q8TDW7 4589 aa10.43□□□□□ -0.74
COL2A1-207ENST00000490609 TRGV4A0A0C4DH28 118 aa10.43□□□□□ -0.74
COL2A1-207ENST00000490609 RBAKDNA6NC62 111 aa10.43□□□□□ -0.74
COL2A1-207ENST00000490609 EREGO14944 169 aa10.43□□□□□ -0.74
COL2A1-207ENST00000490609 EIF3GO75821 320 aaKnown RBP eCLIP10.43□□□□□ -0.74
COL2A1-207ENST00000490609 RANP62826 216 aaKnown RBP10.43□□□□□ -0.74
COL2A1-207ENST00000490609 TVP23CQ96ET8 276 aa10.43□□□□□ -0.74
COL2A1-207ENST00000490609 ARPC5LQ9BPX5 153 aa10.43□□□□□ -0.74
COL2A1-207ENST00000490609 WDR61Q9GZS3 305 aaKnown RBP10.43□□□□□ -0.74
COL2A1-207ENST00000490609 DIRC3C9JPN6 131 aa10.42□□□□□ -0.74
COL2A1-207ENST00000490609 GNRH2O43555 120 aa10.42□□□□□ -0.74
COL2A1-207ENST00000490609 GCSHP23434 173 aa10.42□□□□□ -0.74
COL2A1-207ENST00000490609 SRIP30626 198 aa10.42□□□□□ -0.74
COL2A1-207ENST00000490609 TMEM183BQ1AE95 376 aa10.42□□□□□ -0.74
COL2A1-207ENST00000490609 TDRG1Q3Y452 100 aa10.42□□□□□ -0.74
COL2A1-207ENST00000490609 TMEM183AQ8IXX5 376 aa10.42□□□□□ -0.74
COL2A1-207ENST00000490609 BATF3Q9NR55 127 aa10.42□□□□□ -0.74
COL2A1-207ENST00000490609 PKHD1L1Q86WI1 4243 aa10.41□□□□□ -0.74
COL2A1-207ENST00000490609 A6NHS1 94 aa10.41□□□□□ -0.74
COL2A1-207ENST00000490609 K7EP13 123 aa10.41□□□□□ -0.74
COL2A1-207ENST00000490609 SPXQ9BT56 116 aa10.41□□□□□ -0.74
COL2A1-207ENST00000490609 FAM30AQ9NZY2 134 aa10.41□□□□□ -0.74
COL2A1-207ENST00000490609 TRAV9-2A0A087WT02 112 aa10.4□□□□□ -0.74
COL2A1-207ENST00000490609 IGHV3-16A0A0C4DH30 117 aa10.4□□□□□ -0.74
COL2A1-207ENST00000490609 IFNA5P01569 189 aa10.4□□□□□ -0.74
COL2A1-207ENST00000490609 FRZBQ92765 325 aa10.4□□□□□ -0.74
COL2A1-207ENST00000490609 PTTG2Q9NZH5 202 aa10.4□□□□□ -0.74
COL2A1-207ENST00000490609 TRAV4A0A0B4J268 109 aa10.39□□□□□ -0.75
COL2A1-207ENST00000490609 CRYGDP07320 174 aa10.39□□□□□ -0.75
COL2A1-207ENST00000490609 EVI2AP22794 236 aa10.39□□□□□ -0.75
COL2A1-207ENST00000490609 LINC00299Q6ZSB3 139 aa10.39□□□□□ -0.75
COL2A1-207ENST00000490609 LENEPQ9Y5L5 61 aa10.39□□□□□ -0.75
COL2A1-207ENST00000490609 HMCN2Q8NDA2 5059 aa10.39□□□□□ -0.75
COL2A1-207ENST00000490609 FAM240BA0A1B0GVZ2 78 aa10.38□□□□□ -0.75
COL2A1-207ENST00000490609 ORM1P02763 201 aa10.38□□□□□ -0.75
COL2A1-207ENST00000490609 GATA1P15976 413 aaPredicted RBP10.38□□□□□ -0.75
COL2A1-207ENST00000490609 DPPA3Q6W0C5 159 aa10.38□□□□□ -0.75
COL2A1-207ENST00000490609 TMED6Q8WW62 240 aa10.38□□□□□ -0.75
COL2A1-207ENST00000490609 CCDC32Q9BV29 185 aa10.38□□□□□ -0.75
COL2A1-207ENST00000490609 NMES1Q9C002 83 aa10.38□□□□□ -0.75
COL2A1-207ENST00000490609 OR7C2O60412 319 aa10.37□□□□□ -0.75
COL2A1-207ENST00000490609 TYMSP04818 313 aa10.37□□□□□ -0.75
COL2A1-207ENST00000490609 H2BFSP57053 126 aa10.37□□□□□ -0.75
COL2A1-207ENST00000490609 TIRAPP58753 221 aa10.37□□□□□ -0.75
COL2A1-207ENST00000490609 FAM159AQ6UWV7 190 aa10.37□□□□□ -0.75
COL2A1-207ENST00000490609 SLC25A31Q9H0C2 315 aa10.37□□□□□ -0.75
COL2A1-207ENST00000490609 C11orf21Q9P2W6 132 aa10.37□□□□□ -0.75
COL2A1-207ENST00000490609 TRGV11A0A075B6L2 103 aa10.36□□□□□ -0.75
COL2A1-207ENST00000490609 TRAV8-1A0A0A6YYK1 113 aa10.36□□□□□ -0.75
COL2A1-207ENST00000490609 IBA57-AS1B1ANH7 110 aa10.36□□□□□ -0.75
COL2A1-207ENST00000490609 M0R2P5 195 aa10.36□□□□□ -0.75
COL2A1-207ENST00000490609 CSN1S1P47710 185 aa10.36□□□□□ -0.75
COL2A1-207ENST00000490609 IFITM3Q01628 133 aa10.36□□□□□ -0.75
COL2A1-207ENST00000490609 ASAH1Q13510 395 aa10.36□□□□□ -0.75
COL2A1-207ENST00000490609 LRRC37A5PQ49AS3 106 aa10.36□□□□□ -0.75
COL2A1-207ENST00000490609 LINC01556Q5JQF7 62 aa10.36□□□□□ -0.75
COL2A1-207ENST00000490609 OR4C5Q8NGB2 326 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms