RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 DLEU1O43261 78 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 SCGB2A1O75556 95 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 IGKV3-20P01619 116 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 HLA-DQA1P01909 254 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 TRGV3P03979 118 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 GPX1P07203 203 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 LINC00614P0C842 121 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 LINC00869P0C866 280 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 SAA1P0DJI8 122 aaPredicted RBP3.6□□□□□ -1.83
CSTF1-205ENST00000490539 VPREB1P12018 145 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 ZNF25P17030 456 aaPredicted RBP3.6□□□□□ -1.83
CSTF1-205ENST00000490539 CNTFRP26992 372 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 GNG4P50150 75 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 RAB9AP51151 201 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 TAS2R45P59539 299 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 HSPE1P61604 102 aaKnown RBP3.6□□□□□ -1.83
CSTF1-205ENST00000490539 TIGITQ495A1 244 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 RASL11AQ6T310 242 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 PQLC2Q6ZP29 291 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 TMEM136Q6ZRR5 245 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 BAGE3Q86Y29 109 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 BAGE2Q86Y30 109 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 FAM223AQ8IWN6 122 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 SLC24A4Q8NFF2 622 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 USMG5Q96IX5 58 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 RNF2Q99496 336 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 HSPB9Q9BQS6 159 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 VAMP8Q9BV40 100 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 SAMD10Q9BYL1 202 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 ZNF586Q9NXT0 402 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 TECRQ9NZ01 308 aaKnown RBP3.6□□□□□ -1.83
CSTF1-205ENST00000490539 PRNDQ9UKY0 176 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 ZNF257Q9Y2Q1 563 aa3.6□□□□□ -1.83
CSTF1-205ENST00000490539 TRAV3A0A0B4J244 114 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 SMIM27A0A1W2PRY6 76 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 A4D1N5 150 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 IZUMO1RA6ND01 250 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 HELTA6NFD8 242 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 G3V318 75 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 ZNF253O75346 499 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 IGLV2-8P01709 118 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 EDN2P20800 178 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 G0S2P27469 103 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 PSMB8P28062 276 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 CTRLP40313 264 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 RPL27AP46776 148 aaKnown RBP3.59□□□□□ -1.83
CSTF1-205ENST00000490539 INSL3P51460 131 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 CRIP2P52943 208 aaPredicted RBP3.59□□□□□ -1.83
CSTF1-205ENST00000490539 SUB1P53999 127 aaKnown RBP eCLIP3.59□□□□□ -1.83
CSTF1-205ENST00000490539 KRTAP10-3P60369 221 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 PRCDQ00LT1 54 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 RELQ04864 619 aaPredicted RBP3.59□□□□□ -1.83
CSTF1-205ENST00000490539 ATP5G2Q06055 141 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 C2orf83Q53S99 150 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 CENPWQ5EE01 88 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 COL5A1-AS1Q5SY13 56 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 SPATA31B1PQ5VZV4 182 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 OR4A47Q6IF82 309 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 C19orf35Q6ZS72 473 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 MIR17HGQ75NE6 70 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 VKORC1L1Q8N0U8 176 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 OR8I2Q8N0Y5 310 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 Q8N976 141 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 NEXN-AS1Q8NBZ9 246 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 OR1L8Q8NGR8 309 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 OR1N2Q8NGR9 330 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 OR5B3Q8NH48 314 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 TMEM167AQ8TBQ9 72 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 VN1R17PQ8TDU5 208 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 SRSF12Q8WXF0 261 aaKnown RBP3.59□□□□□ -1.83
CSTF1-205ENST00000490539 KCNS1Q96KK3 526 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 FAM103A1Q9BTL3 118 aaKnown RBP3.59□□□□□ -1.83
CSTF1-205ENST00000490539 TMEM208Q9BTX3 173 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 HINT2Q9BX68 163 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 MRPL32Q9BYC8 188 aaKnown RBP3.59□□□□□ -1.83
CSTF1-205ENST00000490539 ZNF430Q9H8G1 570 aaPredicted RBP3.59□□□□□ -1.83
CSTF1-205ENST00000490539 GNB4Q9HAV0 340 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 BET1LQ9NYM9 111 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 MRPL27Q9P0M9 148 aaKnown RBP3.59□□□□□ -1.83
CSTF1-205ENST00000490539 UQCR10Q9UDW1 63 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 NAT8BQ9UHF3 227 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 GOLT1BQ9Y3E0 138 aa3.59□□□□□ -1.83
CSTF1-205ENST00000490539 A0A1W2PS18 150 aa3.58□□□□□ -1.84
CSTF1-205ENST00000490539 C20orf202A1L168 122 aa3.58□□□□□ -1.84
CSTF1-205ENST00000490539 F2Z2F3 143 aa3.58□□□□□ -1.84
CSTF1-205ENST00000490539 INS-IGF2F8WCM5 200 aa3.58□□□□□ -1.84
CSTF1-205ENST00000490539 LINC01619G3V211 115 aa3.58□□□□□ -1.84
CSTF1-205ENST00000490539 BMPR1BO00238 502 aa3.58□□□□□ -1.84
CSTF1-205ENST00000490539 UPK2O00526 184 aa3.58□□□□□ -1.84
CSTF1-205ENST00000490539 ZNF324O75467 553 aaPredicted RBP3.58□□□□□ -1.84
CSTF1-205ENST00000490539 BRI3O95415 125 aa3.58□□□□□ -1.84
CSTF1-205ENST00000490539 IGLV2-23P01705 113 aa3.58□□□□□ -1.84
CSTF1-205ENST00000490539 APCSP02743 223 aa3.58□□□□□ -1.84
CSTF1-205ENST00000490539 LGALS1P09382 135 aaKnown RBP3.58□□□□□ -1.84
CSTF1-205ENST00000490539 C8orf88P0DMB2 117 aa3.58□□□□□ -1.84
CSTF1-205ENST00000490539 CRYBB3P26998 211 aa3.58□□□□□ -1.84
CSTF1-205ENST00000490539 KRTDAPP60985 99 aa3.58□□□□□ -1.84
CSTF1-205ENST00000490539 ERHP84090 104 aaKnown RBP3.58□□□□□ -1.84
CSTF1-205ENST00000490539 OR5I1Q13606 314 aa3.58□□□□□ -1.84
CSTF1-205ENST00000490539 KLF5Q13887 457 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms