RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 NIT1Q86X76 327 aa3.93□□□□□ -1.78
PTPRK-213ENST00000490332 LINC00469Q8N7U9 141 aa3.93□□□□□ -1.78
PTPRK-213ENST00000490332 PGLYRP4Q96LB8 373 aa3.93□□□□□ -1.78
PTPRK-213ENST00000490332 FAM103A1Q9BTL3 118 aaKnown RBP3.93□□□□□ -1.78
PTPRK-213ENST00000490332 HIF1ANQ9NWT6 349 aa3.93□□□□□ -1.78
PTPRK-213ENST00000490332 UQCR10Q9UDW1 63 aa3.93□□□□□ -1.78
PTPRK-213ENST00000490332 FBXL7Q9UJT9 491 aa3.93□□□□□ -1.78
PTPRK-213ENST00000490332 RPH3ALQ9UNE2 315 aa3.93□□□□□ -1.78
PTPRK-213ENST00000490332 HECTD4Q9Y4D8 3996 aa3.93□□□□□ -1.78
PTPRK-213ENST00000490332 UBR4Q5T4S7 5183 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 CSMD3Q7Z407 3707 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 LOC102724200A0A096LPH7 203 aaPredicted RBP3.92□□□□□ -1.78
PTPRK-213ENST00000490332 TRBV7-1A0A0A6YYK4 115 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 IGHV7-81A0A0B4J1V7 117 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 LCE6AA0A183 80 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 TMEM189A5PLL7 270 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 RBAKDNA6NC62 111 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 NDUFS8O00217 210 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 BRI3O95415 125 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 CA1P00915 261 aaPredicted RBP3.92□□□□□ -1.78
PTPRK-213ENST00000490332 IGLV2-11P01706 119 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 CTSGP08311 255 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 FRMD6-AS1P0C7T7 363 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 LINC00614P0C842 121 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 C3orf79P0CE67 100 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 NTF3P20783 257 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 RELQ04864 619 aaPredicted RBP3.92□□□□□ -1.78
PTPRK-213ENST00000490332 BEAN1Q3B7T3 259 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 PSMG4Q5JS54 123 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 LDLRAD2Q5SZI1 272 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 KPRPQ5T749 579 aaPredicted RBP3.92□□□□□ -1.78
PTPRK-213ENST00000490332 ASPHD1Q5U4P2 390 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 LEMD1Q68G75 181 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 UNQ5815/PRO19632Q6UWF5 114 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 PET117Q6UWS5 81 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 ZNF493Q6ZR52 646 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 TCF24Q7RTU0 167 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 Q8N1X5 172 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 EXOC3-AS1Q8N2X6 119 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 EEF1AKMT3Q96AZ1 226 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 SLC50A1Q9BRV3 221 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 HSPB8Q9UJY1 196 aa3.92□□□□□ -1.78
PTPRK-213ENST00000490332 TRAV9-2A0A087WT02 112 aa3.91□□□□□ -1.78
PTPRK-213ENST00000490332 A0A087X0K7 114 aa3.91□□□□□ -1.78
PTPRK-213ENST00000490332 A0A1B0GUS0 222 aa3.91□□□□□ -1.78
PTPRK-213ENST00000490332 SH2D7A6NKC9 451 aaPredicted RBP3.91□□□□□ -1.78
PTPRK-213ENST00000490332 ZNF785A8K8V0 405 aa3.91□□□□□ -1.78
PTPRK-213ENST00000490332 FABP5P3A8MUU1 101 aa3.91□□□□□ -1.78
PTPRK-213ENST00000490332 HSBP1L1C9JCN9 74 aa3.91□□□□□ -1.78
PTPRK-213ENST00000490332 F2Z2F3 143 aa3.91□□□□□ -1.78
PTPRK-213ENST00000490332 NPFFO15130 113 aa3.91□□□□□ -1.78
PTPRK-213ENST00000490332 CRXO43186 299 aaPredicted RBP3.91□□□□□ -1.78
PTPRK-213ENST00000490332 LEPROTL1O95214 131 aa3.91□□□□□ -1.78
PTPRK-213ENST00000490332 EGR2P11161 476 aaPredicted RBP3.91□□□□□ -1.78
PTPRK-213ENST00000490332 DLX1P56177 255 aa3.91□□□□□ -1.78
PTPRK-213ENST00000490332 LMO4P61968 165 aa3.91□□□□□ -1.78
PTPRK-213ENST00000490332 NUTF2P61970 127 aaKnown RBP3.91□□□□□ -1.78
PTPRK-213ENST00000490332 ATP5G2Q06055 141 aa3.91□□□□□ -1.78
PTPRK-213ENST00000490332 KLRD1Q13241 179 aa3.91□□□□□ -1.78
PTPRK-213ENST00000490332 SPATA45Q537H7 98 aa3.91□□□□□ -1.78
PTPRK-213ENST00000490332 KLF17Q5JT82 389 aaPredicted RBP3.91□□□□□ -1.78
PTPRK-213ENST00000490332 GDF5OSQ5U4N7 250 aa3.91□□□□□ -1.78
PTPRK-213ENST00000490332 RNASEKQ6P5S7 137 aaKnown RBP3.91□□□□□ -1.78
PTPRK-213ENST00000490332 LINC00322Q6ZN03 302 aaPredicted RBP3.91□□□□□ -1.78
PTPRK-213ENST00000490332 TEX29Q8N6K0 151 aa3.91□□□□□ -1.78
PTPRK-213ENST00000490332 Q8N9W7 124 aa3.91□□□□□ -1.78
PTPRK-213ENST00000490332 ZNF502Q8TBZ5 544 aa3.91□□□□□ -1.78
PTPRK-213ENST00000490332 GTSF1Q8WW33 167 aa3.91□□□□□ -1.78
PTPRK-213ENST00000490332 MRPL53Q96EL3 112 aaKnown RBP3.91□□□□□ -1.78
PTPRK-213ENST00000490332 SGK494Q96LW2 274 aa3.91□□□□□ -1.78
PTPRK-213ENST00000490332 ASCL2Q99929 193 aa3.91□□□□□ -1.78
PTPRK-213ENST00000490332 TMEM70Q9BUB7 260 aa3.91□□□□□ -1.78
PTPRK-213ENST00000490332 MAP1LC3CQ9BXW4 147 aa3.91□□□□□ -1.78
PTPRK-213ENST00000490332 TMEM191AQ9H0A3 160 aa3.91□□□□□ -1.78
PTPRK-213ENST00000490332 MRPS16Q9Y3D3 137 aaKnown RBP3.91□□□□□ -1.78
PTPRK-213ENST00000490332 FRAS1Q86XX4 4008 aa3.91□□□□□ -1.78
PTPRK-213ENST00000490332 CENPVL3A0A0U1RRI6 287 aa3.9□□□□□ -1.79
PTPRK-213ENST00000490332 A0A1B0GV90 55 aa3.9□□□□□ -1.79
PTPRK-213ENST00000490332 FAM223BA6NKX1 122 aa3.9□□□□□ -1.79
PTPRK-213ENST00000490332 VWC2LB2RUY7 222 aa3.9□□□□□ -1.79
PTPRK-213ENST00000490332 H3BTX0 84 aa3.9□□□□□ -1.79
PTPRK-213ENST00000490332 H3BUA1 57 aa3.9□□□□□ -1.79
PTPRK-213ENST00000490332 TCAPO15273 167 aa3.9□□□□□ -1.79
PTPRK-213ENST00000490332 LY6HO94772 140 aa3.9□□□□□ -1.79
PTPRK-213ENST00000490332 APOHP02749 345 aaPredicted RBP3.9□□□□□ -1.79
PTPRK-213ENST00000490332 PPBPP02775 128 aa3.9□□□□□ -1.79
PTPRK-213ENST00000490332 CLEC3BP05452 202 aa3.9□□□□□ -1.79
PTPRK-213ENST00000490332 SNRPCP09234 159 aaKnown RBP3.9□□□□□ -1.79
PTPRK-213ENST00000490332 CTRLP40313 264 aa3.9□□□□□ -1.79
PTPRK-213ENST00000490332 CRIP2P52943 208 aaPredicted RBP3.9□□□□□ -1.79
PTPRK-213ENST00000490332 HIST1H1AQ02539 215 aaPredicted RBP3.9□□□□□ -1.79
PTPRK-213ENST00000490332 PRB3Q04118 309 aaPredicted RBP3.9□□□□□ -1.79
PTPRK-213ENST00000490332 PAX8Q06710 450 aa3.9□□□□□ -1.79
PTPRK-213ENST00000490332 KIR3DS1Q14943 382 aa3.9□□□□□ -1.79
PTPRK-213ENST00000490332 COL5A1-AS1Q5SY13 56 aa3.9□□□□□ -1.79
PTPRK-213ENST00000490332 LCN12Q6JVE5 192 aa3.9□□□□□ -1.79
PTPRK-213ENST00000490332 FA2HQ7L5A8 372 aa3.9□□□□□ -1.79
PTPRK-213ENST00000490332 FAM223AQ8IWN6 122 aa3.9□□□□□ -1.79
PTPRK-213ENST00000490332 Q8N976 141 aa3.9□□□□□ -1.79
PTPRK-213ENST00000490332 PRSS3P2Q8NHM4 247 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms