RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 TMEM189A5PLL7 270 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 HIGD1CA8MV81 97 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 A8MWL6 223 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 G3V318 75 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 H3BUX3 64 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 SERF1AO75920 110 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 LTAP01374 205 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 IGKV1-17P01599 117 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 IGHV1-69P01742 117 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 TRGV3P03979 118 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 PRB1P04280 392 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 MSMBP08118 114 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 PRB4P10163 310 aaPredicted RBP2.16□□□□□ -2.06
CALD1-221ENST00000489019 PMCHP20382 165 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 NTF3P20783 257 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 BMI1P35226 326 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 MYCNOSP40205 109 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 RAB9AP51151 201 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 DSCR10P59022 87 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 HBBP68871 147 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 RHOGP84095 191 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 NDPQ00604 133 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 DEFA6Q01524 100 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 PAX8Q06710 450 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 SRSF9Q13242 221 aaKnown RBP eCLIP2.16□□□□□ -2.06
CALD1-221ENST00000489019 JOSD1Q15040 202 aaPredicted RBP2.16□□□□□ -2.06
CALD1-221ENST00000489019 PSG3Q16557 428 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 IQCJQ1A5X6 159 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 C15orf32Q32M92 178 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 OR10J3Q5JRS4 329 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 COA6Q5JTJ3 125 aaKnown RBP2.16□□□□□ -2.06
CALD1-221ENST00000489019 DNLZQ5SXM8 178 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 FAM162BQ5T6X4 162 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 TOMM20LQ6UXN7 152 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 BRD3OSQ6XYD6 125 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 TMEM136Q6ZRR5 245 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 TCF24Q7RTU0 167 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 ATP5L2Q7Z4Y8 100 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 Q86TA4 180 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 TMEM256Q8N2U0 113 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 C5orf56Q8N8D9 126 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 TMEM75Q8N9X5 138 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 NUP35Q8NFH5 326 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 C10orf105Q8TEF2 133 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 ZNF414Q96IQ9 312 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 NOL4LQ96MY1 436 aaPredicted RBP2.16□□□□□ -2.06
CALD1-221ENST00000489019 NDFIP1Q9BT67 221 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 MCRIP2Q9BUT9 160 aaKnown RBP2.16□□□□□ -2.06
CALD1-221ENST00000489019 PRO1933Q9H354 126 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 ZNF492Q9P255 531 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 NAGKQ9UJ70 344 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 LINC00527Q9UJ94 153 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 ZFP30Q9Y2G7 519 aa2.16□□□□□ -2.06
CALD1-221ENST00000489019 URB1O60287 2271 aaKnown RBP2.16□□□□□ -2.06
CALD1-221ENST00000489019 ARFGEF3Q5TH69 2177 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 IGHV3OR16-13A0A075B7E8 117 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 IGHV4-30-2A0A087WSY4 118 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 IGKV2-40A0A087WW87 121 aaPredicted RBP2.15□□□□□ -2.07
CALD1-221ENST00000489019 TMSB15BA0A087X1C1 80 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 IGHV3-49A0A0A0MS15 119 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.15□□□□□ -2.07
CALD1-221ENST00000489019 TRAV8-1A0A0A6YYK1 113 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 IGHV3-74A0A0B4J1X5 117 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 IGHV3-66A0A0C4DH42 116 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 TRBV6-1A0A0K0K1D8 114 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 C19orf71A6NCJ1 209 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 FBLL1A6NHQ2 334 aaKnown RBP2.15□□□□□ -2.07
CALD1-221ENST00000489019 LINC00587B1AMM8 73 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 B4DSR2 109 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 M0R2Z0 102 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 ZNF207O43670 478 aaKnown RBP2.15□□□□□ -2.07
CALD1-221ENST00000489019 NUPR1O60356 82 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 HSBP1O75506 76 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 IGKV2D-40P01614 121 aaPredicted RBP2.15□□□□□ -2.07
CALD1-221ENST00000489019 CTSGP08311 255 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 IGLC2P0DOY2 106 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 GZMBP10144 247 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 SLC25A16P16260 332 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 RPS20P60866 119 aaKnown RBP2.15□□□□□ -2.07
CALD1-221ENST00000489019 KRTDAPP60985 99 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 Q0VG73 95 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 RIGQ13278 110 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 PDE6HQ13956 83 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 SAPCD1Q5SSQ6 148 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 RNASEKQ6P5S7 137 aaKnown RBP2.15□□□□□ -2.07
CALD1-221ENST00000489019 LINC00322Q6ZN03 302 aaPredicted RBP2.15□□□□□ -2.07
CALD1-221ENST00000489019 ZNF502Q8TBZ5 544 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 KCNS1Q96KK3 526 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 FAM218AQ96MZ4 157 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 METTL26Q96S19 204 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 OVOL2Q9BRP0 275 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 SLC50A1Q9BRV3 221 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 KLF12Q9Y4X4 402 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 TIMM8BQ9Y5J9 83 aaPredicted RBP2.15□□□□□ -2.07
CALD1-221ENST00000489019 SOX21Q9Y651 276 aaPredicted RBP2.15□□□□□ -2.07
CALD1-221ENST00000489019 SMAD5-AS1Q9Y6J3 95 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 CFAP54Q96N23 3096 aa2.15□□□□□ -2.07
CALD1-221ENST00000489019 CADP27708 2225 aa2.14□□□□□ -2.07
CALD1-221ENST00000489019 USF3Q68DE3 2245 aa2.14□□□□□ -2.07
CALD1-221ENST00000489019 FRYLO94915 3013 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms