RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 TMEM229BQ8NBD8 167 aa-0.03□□□□□ -2.41
CCDC66-221ENST00000487739 PRELID3AQ96N28 172 aa-0.03□□□□□ -2.41
CCDC66-221ENST00000487739 BIN3Q9NQY0 253 aa-0.03□□□□□ -2.41
CCDC66-221ENST00000487739 LAMTOR3Q9UHA4 124 aa-0.03□□□□□ -2.41
CCDC66-221ENST00000487739 RREB1Q92766 1687 aa-0.03□□□□□ -2.41
CCDC66-221ENST00000487739 SSPOA2VEC9 5147 aa-0.03□□□□□ -2.42
CCDC66-221ENST00000487739 YTHDC2Q9H6S0 1430 aaKnown RBP-0.04□□□□□ -2.42
CCDC66-221ENST00000487739 MAP1LC3B2A6NCE7 125 aa-0.04□□□□□ -2.42
CCDC66-221ENST00000487739 FXYD1O00168 92 aa-0.04□□□□□ -2.42
CCDC66-221ENST00000487739 TPT1P13693 172 aaKnown RBP-0.04□□□□□ -2.42
CCDC66-221ENST00000487739 G0S2P27469 103 aa-0.04□□□□□ -2.42
CCDC66-221ENST00000487739 SDC2P34741 201 aa-0.04□□□□□ -2.42
CCDC66-221ENST00000487739 TCTEX1D1Q8N7M0 179 aa-0.04□□□□□ -2.42
CCDC66-221ENST00000487739 ISOC1Q96CN7 298 aa-0.04□□□□□ -2.42
CCDC66-221ENST00000487739 MRPL35Q9NZE8 188 aaKnown RBP-0.04□□□□□ -2.42
CCDC66-221ENST00000487739 COMMD3Q9UBI1 195 aa-0.04□□□□□ -2.42
CCDC66-221ENST00000487739 TANC1Q9C0D5 1861 aa-0.04□□□□□ -2.42
CCDC66-221ENST00000487739 MAP2P11137 1827 aaKnown RBP-0.04□□□□□ -2.42
CCDC66-221ENST00000487739 ESPL1Q14674 2120 aa-0.04□□□□□ -2.42
CCDC66-221ENST00000487739 FAM135BQ49AJ0 1406 aa-0.04□□□□□ -2.42
CCDC66-221ENST00000487739 KDM6BO15054 1643 aa-0.05□□□□□ -2.42
CCDC66-221ENST00000487739 ARL5CA6NH57 179 aa-0.05□□□□□ -2.42
CCDC66-221ENST00000487739 CDC42EP2O14613 210 aa-0.05□□□□□ -2.42
CCDC66-221ENST00000487739 BCL2P10415 239 aa-0.05□□□□□ -2.42
CCDC66-221ENST00000487739 HRCT1Q6UXD1 115 aa-0.05□□□□□ -2.42
CCDC66-221ENST00000487739 LINC00305Q7Z4B0 112 aa-0.05□□□□□ -2.42
CCDC66-221ENST00000487739 STX12Q86Y82 276 aa-0.05□□□□□ -2.42
CCDC66-221ENST00000487739 MRPL36Q9P0J6 103 aaKnown RBP-0.05□□□□□ -2.42
CCDC66-221ENST00000487739 DLEC1Q9Y238 1755 aa-0.05□□□□□ -2.42
CCDC66-221ENST00000487739 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.05□□□□□ -2.42
CCDC66-221ENST00000487739 PPP5D1E7EU14 171 aa-0.06□□□□□ -2.42
CCDC66-221ENST00000487739 EDF1O60869 148 aaKnown RBP-0.06□□□□□ -2.42
CCDC66-221ENST00000487739 SAA1P0DJI8 122 aaPredicted RBP-0.06□□□□□ -2.42
CCDC66-221ENST00000487739 IL7P13232 177 aa-0.06□□□□□ -2.42
CCDC66-221ENST00000487739 TRIQKQ629K1 86 aa-0.06□□□□□ -2.42
CCDC66-221ENST00000487739 BOLA2Q9H3K6 86 aa-0.06□□□□□ -2.42
CCDC66-221ENST00000487739 BDP1A6H8Y1 2624 aa-0.07□□□□□ -2.42
CCDC66-221ENST00000487739 TRBV27A0A0K0K1C4 114 aa-0.07□□□□□ -2.42
CCDC66-221ENST00000487739 LOC107986453A0A1B0GWG9 222 aa-0.07□□□□□ -2.42
CCDC66-221ENST00000487739 TMEM30CPA0ZSE6 113 aa-0.07□□□□□ -2.42
CCDC66-221ENST00000487739 IGF2P01344 180 aa-0.07□□□□□ -2.42
CCDC66-221ENST00000487739 IGKCP01834 107 aa-0.07□□□□□ -2.42
CCDC66-221ENST00000487739 GNG10P50151 68 aa-0.07□□□□□ -2.42
CCDC66-221ENST00000487739 DEFB132Q7Z7B7 95 aa-0.07□□□□□ -2.42
CCDC66-221ENST00000487739 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.07□□□□□ -2.42
CCDC66-221ENST00000487739 OR51A4Q8NGJ6 313 aa-0.07□□□□□ -2.42
CCDC66-221ENST00000487739 LAMTOR2Q9Y2Q5 125 aa-0.07□□□□□ -2.42
CCDC66-221ENST00000487739 MPC1Q9Y5U8 109 aa-0.07□□□□□ -2.42
CCDC66-221ENST00000487739 CDK12Q9NYV4 1490 aaPredicted RBP-0.08□□□□□ -2.42
CCDC66-221ENST00000487739 LRP1Q07954 4544 aaKnown RBP-0.08□□□□□ -2.42
CCDC66-221ENST00000487739 TRAV13-1A0A0B4J241 112 aa-0.08□□□□□ -2.42
CCDC66-221ENST00000487739 HIGD1CA8MV81 97 aa-0.08□□□□□ -2.42
CCDC66-221ENST00000487739 SLC25A4P12235 298 aa-0.08□□□□□ -2.42
CCDC66-221ENST00000487739 CRYGSP22914 178 aa-0.08□□□□□ -2.42
CCDC66-221ENST00000487739 DNAJB13P59910 316 aa-0.08□□□□□ -2.42
CCDC66-221ENST00000487739 IQCJQ1A5X6 159 aa-0.08□□□□□ -2.42
CCDC66-221ENST00000487739 TMEM78Q5T7P6 136 aa-0.08□□□□□ -2.42
CCDC66-221ENST00000487739 PPP1R2P3Q6NXS1 205 aa-0.08□□□□□ -2.42
CCDC66-221ENST00000487739 MORN4Q8NDC4 146 aa-0.08□□□□□ -2.42
CCDC66-221ENST00000487739 OR8J3Q8NGG0 315 aa-0.08□□□□□ -2.42
CCDC66-221ENST00000487739 CCDC32Q9BV29 185 aa-0.08□□□□□ -2.42
CCDC66-221ENST00000487739 PROK2Q9HC23 129 aa-0.08□□□□□ -2.42
CCDC66-221ENST00000487739 TPRP12270 2363 aaKnown RBP-0.08□□□□□ -2.42
CCDC66-221ENST00000487739 HELZP42694 1942 aaKnown RBP-0.09□□□□□ -2.42
CCDC66-221ENST00000487739 LRP5O75197 1615 aa-0.09□□□□□ -2.42
CCDC66-221ENST00000487739 A0A1W2PRE2 83 aa-0.09□□□□□ -2.42
CCDC66-221ENST00000487739 H3BMG7 143 aa-0.09□□□□□ -2.42
CCDC66-221ENST00000487739 M0QZK8 103 aa-0.09□□□□□ -2.42
CCDC66-221ENST00000487739 TPST1O60507 370 aa-0.09□□□□□ -2.42
CCDC66-221ENST00000487739 GTF2A1P52655 376 aaPredicted RBP-0.09□□□□□ -2.42
CCDC66-221ENST00000487739 BLCAPP62952 87 aa-0.09□□□□□ -2.42
CCDC66-221ENST00000487739 LYPD5Q6UWN5 251 aa-0.09□□□□□ -2.42
CCDC66-221ENST00000487739 LXNQ9BS40 222 aa-0.09□□□□□ -2.42
CCDC66-221ENST00000487739 TRAPPC2LQ9UL33 140 aa-0.09□□□□□ -2.42
CCDC66-221ENST00000487739 MED31Q9Y3C7 131 aa-0.09□□□□□ -2.42
CCDC66-221ENST00000487739 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.1□□□□□ -2.42
CCDC66-221ENST00000487739 MACF1Q9UPN3 7388 aaKnown RBP-0.1□□□□□ -2.42
CCDC66-221ENST00000487739 HRNRQ86YZ3 2850 aaPredicted RBP-0.1□□□□□ -2.43
CCDC66-221ENST00000487739 PTPRZ1P23471 2315 aaPredicted RBP-0.1□□□□□ -2.43
CCDC66-221ENST00000487739 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.1□□□□□ -2.43
CCDC66-221ENST00000487739 LOC107984640A0A0U1RRK4 108 aa-0.1□□□□□ -2.43
CCDC66-221ENST00000487739 TMEM189A5PLL7 270 aa-0.1□□□□□ -2.43
CCDC66-221ENST00000487739 E5RI56 91 aa-0.1□□□□□ -2.43
CCDC66-221ENST00000487739 PCBD2Q9H0N5 130 aa-0.1□□□□□ -2.43
CCDC66-221ENST00000487739 CBLN4Q9NTU7 201 aa-0.1□□□□□ -2.43
CCDC66-221ENST00000487739 KIDINS220Q9ULH0 1771 aa-0.1□□□□□ -2.43
CCDC66-221ENST00000487739 CPDO75976 1380 aa-0.1□□□□□ -2.43
CCDC66-221ENST00000487739 ROCK1Q13464 1354 aa-0.1□□□□□ -2.43
CCDC66-221ENST00000487739 IGF2RP11717 2491 aa-0.1□□□□□ -2.43
CCDC66-221ENST00000487739 ANKRD17O75179 2603 aaKnown RBP-0.11□□□□□ -2.43
CCDC66-221ENST00000487739 A0A0G2JMM0 328 aa-0.11□□□□□ -2.43
CCDC66-221ENST00000487739 IFITM5A6NNB3 132 aa-0.11□□□□□ -2.43
CCDC66-221ENST00000487739 CCSMST1Q4G0I0 132 aa-0.11□□□□□ -2.43
CCDC66-221ENST00000487739 BRK1Q8WUW1 75 aa-0.11□□□□□ -2.43
CCDC66-221ENST00000487739 THEM6Q8WUY1 208 aa-0.11□□□□□ -2.43
CCDC66-221ENST00000487739 SMIM7Q9BQ49 75 aa-0.11□□□□□ -2.43
CCDC66-221ENST00000487739 C19orf12Q9NSK7 152 aa-0.11□□□□□ -2.43
CCDC66-221ENST00000487739 TNS1Q9HBL0 1735 aaKnown RBP-0.11□□□□□ -2.43
CCDC66-221ENST00000487739 XIRP1Q702N8 1843 aaKnown RBP-0.11□□□□□ -2.43
CCDC66-221ENST00000487739 ABCA1O95477 2261 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms