RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 IDO1P14902 403 aa-1.74□□□□□ -2.69
RBM39-234ENST00000487604 ZNF714Q96N38 554 aa-1.74□□□□□ -2.69
RBM39-234ENST00000487604 CACYBPQ9HB71 228 aaKnown RBP-1.74□□□□□ -2.69
RBM39-234ENST00000487604 PARVBQ9HBI1 364 aa-1.74□□□□□ -2.69
RBM39-234ENST00000487604 ATP6V1DQ9Y5K8 247 aa-1.74□□□□□ -2.69
RBM39-234ENST00000487604 FRMPD1Q5SYB0 1578 aa-1.74□□□□□ -2.69
RBM39-234ENST00000487604 TRPM1Q7Z4N2 1603 aa-1.74□□□□□ -2.69
RBM39-234ENST00000487604 DNAJC13O75165 2243 aa-1.74□□□□□ -2.69
RBM39-234ENST00000487604 MGAM2Q2M2H8 2515 aa-1.74□□□□□ -2.69
RBM39-234ENST00000487604 MTORP42345 2549 aa-1.75□□□□□ -2.69
RBM39-234ENST00000487604 ZNF815PA8K554 130 aa-1.75□□□□□ -2.69
RBM39-234ENST00000487604 FAM25EA8MYX2 175 aa-1.75□□□□□ -2.69
RBM39-234ENST00000487604 CRHP06850 196 aa-1.75□□□□□ -2.69
RBM39-234ENST00000487604 HIST1H3AP68431 136 aa-1.75□□□□□ -2.69
RBM39-234ENST00000487604 H3F3AP84243 136 aa-1.75□□□□□ -2.69
RBM39-234ENST00000487604 KLKP1Q107X0 134 aa-1.75□□□□□ -2.69
RBM39-234ENST00000487604 IMPG1Q17R60 797 aa-1.75□□□□□ -2.69
RBM39-234ENST00000487604 SSBP3-AS1Q7Z2R9 100 aa-1.75□□□□□ -2.69
RBM39-234ENST00000487604 PRELID3BQ9Y3B1 194 aa-1.75□□□□□ -2.69
RBM39-234ENST00000487604 DMXL1Q9Y485 3027 aa-1.75□□□□□ -2.69
RBM39-234ENST00000487604 RELNP78509 3460 aa-1.76□□□□□ -2.69
RBM39-234ENST00000487604 TNS1Q9HBL0 1735 aaKnown RBP-1.76□□□□□ -2.69
RBM39-234ENST00000487604 ITPR1Q14643 2758 aa-1.76□□□□□ -2.69
RBM39-234ENST00000487604 MCRIP1C9JLW8 97 aa-1.76□□□□□ -2.69
RBM39-234ENST00000487604 DIAPH2-AS1Q14236 149 aa-1.76□□□□□ -2.69
RBM39-234ENST00000487604 NEDD8Q15843 81 aa-1.76□□□□□ -2.69
RBM39-234ENST00000487604 SNCBQ16143 134 aa-1.76□□□□□ -2.69
RBM39-234ENST00000487604 GRPEL2Q8TAA5 225 aa-1.76□□□□□ -2.69
RBM39-234ENST00000487604 BPESC1Q9GZL8 116 aa-1.76□□□□□ -2.69
RBM39-234ENST00000487604 MAP2P11137 1827 aaKnown RBP-1.76□□□□□ -2.69
RBM39-234ENST00000487604 NISCHQ9Y2I1 1504 aa-1.76□□□□□ -2.69
RBM39-234ENST00000487604 SSC5DA1L4H1 1573 aa-1.76□□□□□ -2.69
RBM39-234ENST00000487604 CCDC168Q8NDH2 2452 aa-1.77□□□□□ -2.69
RBM39-234ENST00000487604 A0A0D9SFI3 127 aa-1.77□□□□□ -2.69
RBM39-234ENST00000487604 LOC101927531A0A1B0GV80 90 aa-1.77□□□□□ -2.69
RBM39-234ENST00000487604 F2Z2F3 143 aa-1.77□□□□□ -2.69
RBM39-234ENST00000487604 TCRBP04435 133 aa-1.77□□□□□ -2.69
RBM39-234ENST00000487604 LINC00269Q8N2A0 174 aa-1.77□□□□□ -2.69
RBM39-234ENST00000487604 OTUD6BQ8N6M0 293 aa-1.77□□□□□ -2.69
RBM39-234ENST00000487604 ISOC1Q96CN7 298 aa-1.77□□□□□ -2.69
RBM39-234ENST00000487604 MRPL35Q9NZE8 188 aaKnown RBP-1.77□□□□□ -2.69
RBM39-234ENST00000487604 ATG2AQ2TAZ0 1938 aa-1.78□□□□□ -2.69
RBM39-234ENST00000487604 ZZEF1O43149 2961 aa-1.78□□□□□ -2.69
RBM39-234ENST00000487604 A0A0G2JMM0 328 aa-1.78□□□□□ -2.69
RBM39-234ENST00000487604 A0A1W2PPB8 328 aa-1.78□□□□□ -2.69
RBM39-234ENST00000487604 KIR3DP1A8MWS1 328 aa-1.78□□□□□ -2.69
RBM39-234ENST00000487604 LYRM1O43325 122 aa-1.78□□□□□ -2.69
RBM39-234ENST00000487604 GYPBP06028 91 aa-1.78□□□□□ -2.69
RBM39-234ENST00000487604 GNPDA2Q8TDQ7 276 aa-1.78□□□□□ -2.69
RBM39-234ENST00000487604 C10orf71Q711Q0 1435 aa-1.78□□□□□ -2.69
RBM39-234ENST00000487604 UTP20O75691 2785 aaKnown RBP-1.78□□□□□ -2.69
RBM39-234ENST00000487604 TRAV22A0A0B4J277 110 aa-1.79□□□□□ -2.7
RBM39-234ENST00000487604 K7ERJ3 54 aa-1.79□□□□□ -2.7
RBM39-234ENST00000487604 RER1O15258 196 aa-1.79□□□□□ -2.7
RBM39-234ENST00000487604 SNRPD3P62318 126 aaKnown RBP-1.79□□□□□ -2.7
RBM39-234ENST00000487604 VMA21Q3ZAQ7 101 aa-1.79□□□□□ -2.7
RBM39-234ENST00000487604 CSAG1Q6PB30 78 aa-1.79□□□□□ -2.7
RBM39-234ENST00000487604 DSCR8Q96T75 97 aa-1.79□□□□□ -2.7
RBM39-234ENST00000487604 LLPHQ9BRT6 129 aaKnown RBP-1.79□□□□□ -2.7
RBM39-234ENST00000487604 ASB4Q9Y574 426 aa-1.79□□□□□ -2.7
RBM39-234ENST00000487604 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.79□□□□□ -2.72e-17■■□□□ 11.7
RBM39-234ENST00000487604 NBEAQ8NFP9 2946 aa-1.8□□□□□ -2.7
RBM39-234ENST00000487604 GCN1Q92616 2671 aaKnown RBP-1.8□□□□□ -2.7
RBM39-234ENST00000487604 CEP295Q9C0D2 2601 aa-1.8□□□□□ -2.7
RBM39-234ENST00000487604 ACACAQ13085 2346 aa-1.8□□□□□ -2.7
RBM39-234ENST00000487604 A0A0C4DFX4 3053 aa-1.8□□□□□ -2.7
RBM39-234ENST00000487604 M0QX08 132 aa-1.8□□□□□ -2.7
RBM39-234ENST00000487604 IFNA7P01567 189 aa-1.8□□□□□ -2.7
RBM39-234ENST00000487604 CXCL1P09341 107 aa-1.8□□□□□ -2.7
RBM39-234ENST00000487604 ARPP19P56211 112 aa-1.8□□□□□ -2.7
RBM39-234ENST00000487604 DEFA5Q01523 94 aa-1.8□□□□□ -2.7
RBM39-234ENST00000487604 DEFB112Q30KQ8 113 aa-1.8□□□□□ -2.7
RBM39-234ENST00000487604 GOLT1AQ6ZVE7 132 aa-1.8□□□□□ -2.7
RBM39-234ENST00000487604 IFNA4P05014 189 aa-1.81□□□□□ -2.7
RBM39-234ENST00000487604 SPINK8P0C7L1 97 aa-1.81□□□□□ -2.7
RBM39-234ENST00000487604 NFYBP25208 207 aa-1.81□□□□□ -2.7
RBM39-234ENST00000487604 MT1HP80294 61 aa-1.81□□□□□ -2.7
RBM39-234ENST00000487604 DEFB135Q30KP9 77 aa-1.81□□□□□ -2.7
RBM39-234ENST00000487604 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-1.81□□□□□ -2.7
RBM39-234ENST00000487604 UBE2DNLQ8IWF7 75 aa-1.81□□□□□ -2.7
RBM39-234ENST00000487604 SMIM11BQ8TCY0 68 aa-1.81□□□□□ -2.7
RBM39-234ENST00000487604 MAP1LC3BQ9GZQ8 125 aa-1.81□□□□□ -2.7
RBM39-234ENST00000487604 CCDC144AA2RUR9 1427 aa-1.82□□□□□ -2.7
RBM39-234ENST00000487604 AFDNP55196 1824 aaKnown RBP-1.82□□□□□ -2.7
RBM39-234ENST00000487604 CPDO75976 1380 aa-1.82□□□□□ -2.7
RBM39-234ENST00000487604 PKD1L2Q7Z442 2459 aa-1.82□□□□□ -2.7
RBM39-234ENST00000487604 SPRR1BP22528 89 aa-1.82□□□□□ -2.7
RBM39-234ENST00000487604 TMBIM6P55061 237 aa-1.82□□□□□ -2.7
RBM39-234ENST00000487604 HAMPP81172 84 aa-1.82□□□□□ -2.7
RBM39-234ENST00000487604 TMEM97Q5BJF2 176 aa-1.82□□□□□ -2.7
RBM39-234ENST00000487604 AP1S3Q96PC3 154 aa-1.82□□□□□ -2.7
RBM39-234ENST00000487604 ENY2Q9NPA8 101 aa-1.82□□□□□ -2.7
RBM39-234ENST00000487604 MYH9P35579 1960 aaKnown RBP-1.82□□□□□ -2.7
RBM39-234ENST00000487604 CHD7Q9P2D1 2997 aa-1.83□□□□□ -2.7
RBM39-234ENST00000487604 PLXNA1Q9UIW2 1896 aa-1.83□□□□□ -2.7
RBM39-234ENST00000487604 TPM3P06753 285 aa-1.83□□□□□ -2.7
RBM39-234ENST00000487604 PHBP35232 272 aa-1.83□□□□□ -2.7
RBM39-234ENST00000487604 EMX2Q04743 252 aa-1.83□□□□□ -2.7
RBM39-234ENST00000487604 FAM74A4Q5TZK3 123 aa-1.83□□□□□ -2.7
RBM39-234ENST00000487604 HACD4Q5VWC8 232 aa-1.83□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms