RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 FGD6Q6ZV73 1430 aa0.79□□□□□ -2.28
NSMCE4A-210ENST00000483541 LOC107984156A0A0G2JMH3 177 aa0.78□□□□□ -2.28
NSMCE4A-210ENST00000483541 A0A0J9YY99 117 aa0.78□□□□□ -2.28
NSMCE4A-210ENST00000483541 EDF1O60869 148 aaKnown RBP0.78□□□□□ -2.28
NSMCE4A-210ENST00000483541 DNAJB13P59910 316 aa0.78□□□□□ -2.28
NSMCE4A-210ENST00000483541 RPL37AP61513 92 aaKnown RBP0.78□□□□□ -2.28
NSMCE4A-210ENST00000483541 PSPHP78330 225 aa0.78□□□□□ -2.28
NSMCE4A-210ENST00000483541 OR8B8Q15620 311 aa0.78□□□□□ -2.28
NSMCE4A-210ENST00000483541 IZUMO2Q6UXV1 221 aa0.78□□□□□ -2.28
NSMCE4A-210ENST00000483541 C3orf62Q6ZUJ4 267 aa0.78□□□□□ -2.28
NSMCE4A-210ENST00000483541 SBSPONQ8IVN8 264 aa0.78□□□□□ -2.28
NSMCE4A-210ENST00000483541 ARL17AQ8IVW1 177 aa0.78□□□□□ -2.28
NSMCE4A-210ENST00000483541 PYDC1Q8WXC3 89 aa0.78□□□□□ -2.28
NSMCE4A-210ENST00000483541 NABP2Q9BQ15 211 aa0.78□□□□□ -2.28
NSMCE4A-210ENST00000483541 SPANXCQ9NY87 97 aa0.78□□□□□ -2.28
NSMCE4A-210ENST00000483541 MPC1Q9Y5U8 109 aa0.78□□□□□ -2.28
NSMCE4A-210ENST00000483541 MED23Q9ULK4 1368 aa0.78□□□□□ -2.28
NSMCE4A-210ENST00000483541 TRAV36DV7A0A075B6V5 113 aa0.77□□□□□ -2.29
NSMCE4A-210ENST00000483541 PNMA8CA0A1B0GUJ8 204 aa0.77□□□□□ -2.29
NSMCE4A-210ENST00000483541 A0A1B0GX51 115 aa0.77□□□□□ -2.29
NSMCE4A-210ENST00000483541 IFITM5A6NNB3 132 aa0.77□□□□□ -2.29
NSMCE4A-210ENST00000483541 UQCRQO14949 82 aa0.77□□□□□ -2.29
NSMCE4A-210ENST00000483541 HBDP02042 147 aa0.77□□□□□ -2.29
NSMCE4A-210ENST00000483541 SLC25A4P12235 298 aa0.77□□□□□ -2.29
NSMCE4A-210ENST00000483541 PDE6GP18545 87 aa0.77□□□□□ -2.29
NSMCE4A-210ENST00000483541 GTF2A1P52655 376 aaPredicted RBP0.77□□□□□ -2.29
NSMCE4A-210ENST00000483541 RPS28P62857 69 aaKnown RBP0.77□□□□□ -2.29
NSMCE4A-210ENST00000483541 BLCAPP62952 87 aa0.77□□□□□ -2.29
NSMCE4A-210ENST00000483541 PRB3Q04118 309 aaPredicted RBP0.77□□□□□ -2.29
NSMCE4A-210ENST00000483541 CCDC153Q494R4 210 aa0.77□□□□□ -2.29
NSMCE4A-210ENST00000483541 CCSMST1Q4G0I0 132 aa0.77□□□□□ -2.29
NSMCE4A-210ENST00000483541 Q6ZQY7 126 aa0.77□□□□□ -2.29
NSMCE4A-210ENST00000483541 TCTEX1D1Q8N7M0 179 aa0.77□□□□□ -2.29
NSMCE4A-210ENST00000483541 OR8J3Q8NGG0 315 aa0.77□□□□□ -2.29
NSMCE4A-210ENST00000483541 SMIM7Q9BQ49 75 aa0.77□□□□□ -2.29
NSMCE4A-210ENST00000483541 BCORL1Q5H9F3 1711 aa0.77□□□□□ -2.29
NSMCE4A-210ENST00000483541 SPAG17Q6Q759 2223 aa0.76□□□□□ -2.29
NSMCE4A-210ENST00000483541 ARAP1Q96P48 1450 aa0.76□□□□□ -2.29
NSMCE4A-210ENST00000483541 A0A1W2PPB8 328 aa0.76□□□□□ -2.29
NSMCE4A-210ENST00000483541 A0A1W2PRS3 328 aa0.76□□□□□ -2.29
NSMCE4A-210ENST00000483541 ZNF727A8MUV8 499 aa0.76□□□□□ -2.29
NSMCE4A-210ENST00000483541 KIR3DP1A8MWS1 328 aa0.76□□□□□ -2.29
NSMCE4A-210ENST00000483541 DEGS1O15121 323 aa0.76□□□□□ -2.29
NSMCE4A-210ENST00000483541 CKS2P33552 79 aa0.76□□□□□ -2.29
NSMCE4A-210ENST00000483541 HSD17B12Q53GQ0 312 aa0.76□□□□□ -2.29
NSMCE4A-210ENST00000483541 C19orf12Q9NSK7 152 aa0.76□□□□□ -2.29
NSMCE4A-210ENST00000483541 CALML5Q9NZT1 146 aa0.76□□□□□ -2.29
NSMCE4A-210ENST00000483541 TRBV30A0A0K0K1B3 111 aa0.75□□□□□ -2.29
NSMCE4A-210ENST00000483541 NUPR2A6NF83 97 aa0.75□□□□□ -2.29
NSMCE4A-210ENST00000483541 PAEPP09466 180 aa0.75□□□□□ -2.29
NSMCE4A-210ENST00000483541 CCL4P13236 92 aa0.75□□□□□ -2.29
NSMCE4A-210ENST00000483541 HIST1H1BP16401 226 aaKnown RBP0.75□□□□□ -2.29
NSMCE4A-210ENST00000483541 CMPK1P30085 196 aa0.75□□□□□ -2.29
NSMCE4A-210ENST00000483541 FXYD4P59646 89 aa0.75□□□□□ -2.29
NSMCE4A-210ENST00000483541 PCBD1P61457 104 aa0.75□□□□□ -2.29
NSMCE4A-210ENST00000483541 SNRPD3P62318 126 aaKnown RBP0.75□□□□□ -2.29
NSMCE4A-210ENST00000483541 Q86TA4 180 aa0.75□□□□□ -2.29
NSMCE4A-210ENST00000483541 TCTE3Q8IZS6 198 aa0.75□□□□□ -2.29
NSMCE4A-210ENST00000483541 C10orf111Q8N326 155 aa0.75□□□□□ -2.29
NSMCE4A-210ENST00000483541 HELZP42694 1942 aaKnown RBP0.75□□□□□ -2.29
NSMCE4A-210ENST00000483541 CTTNBP2Q8WZ74 1663 aa0.75□□□□□ -2.29
NSMCE4A-210ENST00000483541 ZNF462Q96JM2 2506 aa0.74□□□□□ -2.29
NSMCE4A-210ENST00000483541 BORCS7-ASMTA0A0B4J1R7 106 aa0.74□□□□□ -2.29
NSMCE4A-210ENST00000483541 IGHV3-30P01768 117 aa0.74□□□□□ -2.29
NSMCE4A-210ENST00000483541 TCRAP04437 139 aa0.74□□□□□ -2.29
NSMCE4A-210ENST00000483541 SLC25A5P05141 298 aaKnown RBP0.74□□□□□ -2.29
NSMCE4A-210ENST00000483541 GYPBP06028 91 aa0.74□□□□□ -2.29
NSMCE4A-210ENST00000483541 DBIP07108 87 aaKnown RBP0.74□□□□□ -2.29
NSMCE4A-210ENST00000483541 IGHV3-30-5P0DP03 117 aa0.74□□□□□ -2.29
NSMCE4A-210ENST00000483541 SCGB1A1P11684 91 aa0.74□□□□□ -2.29
NSMCE4A-210ENST00000483541 SDC4P31431 198 aa0.74□□□□□ -2.29
NSMCE4A-210ENST00000483541 OTOSQ8NHW6 89 aa0.74□□□□□ -2.29
NSMCE4A-210ENST00000483541 MAGOHBQ96A72 148 aaKnown RBP0.74□□□□□ -2.29
NSMCE4A-210ENST00000483541 TENM3Q9P273 2699 aa0.74□□□□□ -2.29
NSMCE4A-210ENST00000483541 WDR97A6NE52 1622 aa0.74□□□□□ -2.29
NSMCE4A-210ENST00000483541 IGHV1-24A0A0C4DH33 117 aa0.73□□□□□ -2.29
NSMCE4A-210ENST00000483541 TMEM189A5PLL7 270 aa0.73□□□□□ -2.29
NSMCE4A-210ENST00000483541 OR2H2O95918 312 aa0.73□□□□□ -2.29
NSMCE4A-210ENST00000483541 SCTP09683 121 aa0.73□□□□□ -2.29
NSMCE4A-210ENST00000483541 QRFPP83859 136 aa0.73□□□□□ -2.29
NSMCE4A-210ENST00000483541 ASB16-AS1Q495Z4 193 aa0.73□□□□□ -2.29
NSMCE4A-210ENST00000483541 IDO2Q6ZQW0 420 aa0.73□□□□□ -2.29
NSMCE4A-210ENST00000483541 Q6ZS92 163 aa0.73□□□□□ -2.29
NSMCE4A-210ENST00000483541 SLC35B3Q9H1N7 401 aa0.73□□□□□ -2.29
NSMCE4A-210ENST00000483541 BANF2Q9H503 90 aa0.73□□□□□ -2.29
NSMCE4A-210ENST00000483541 METTL1Q9UBP6 276 aaKnown RBP0.73□□□□□ -2.29
NSMCE4A-210ENST00000483541 JPT1Q9UK76 154 aa0.73□□□□□ -2.29
NSMCE4A-210ENST00000483541 NOTCH1P46531 2555 aa0.73□□□□□ -2.29
NSMCE4A-210ENST00000483541 TMEM30CPA0ZSE6 113 aa0.72□□□□□ -2.29
NSMCE4A-210ENST00000483541 A6NN06 94 aa0.72□□□□□ -2.29
NSMCE4A-210ENST00000483541 C9JAW5 83 aa0.72□□□□□ -2.29
NSMCE4A-210ENST00000483541 CDC42EP2O14613 210 aa0.72□□□□□ -2.29
NSMCE4A-210ENST00000483541 SMIM24O75264 130 aa0.72□□□□□ -2.29
NSMCE4A-210ENST00000483541 TNFSF15O95150 251 aa0.72□□□□□ -2.29
NSMCE4A-210ENST00000483541 MT-ND4LP03901 98 aa0.72□□□□□ -2.29
NSMCE4A-210ENST00000483541 CSAG1Q6PB30 78 aa0.72□□□□□ -2.29
NSMCE4A-210ENST00000483541 OR4S1Q8NGB4 309 aa0.72□□□□□ -2.29
NSMCE4A-210ENST00000483541 ANP32BQ92688 251 aaKnown RBP0.72□□□□□ -2.29
NSMCE4A-210ENST00000483541 CCL19Q99731 98 aa0.72□□□□□ -2.29
NSMCE4A-210ENST00000483541 BATF3Q9NR55 127 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms