RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 UBR4Q5T4S7 5183 aa11.81□□□□□ -0.52
RXRB-203ENST00000481441 A0A087X0K7 114 aa11.81□□□□□ -0.52
RXRB-203ENST00000481441 SNURFLB1AK76 121 aa11.81□□□□□ -0.52
RXRB-203ENST00000481441 GCSHP23434 173 aa11.81□□□□□ -0.52
RXRB-203ENST00000481441 HAMPP81172 84 aa11.81□□□□□ -0.52
RXRB-203ENST00000481441 SERF2P84101 59 aa11.81□□□□□ -0.52
RXRB-203ENST00000481441 FAM74A1Q5RGS3 127 aa11.81□□□□□ -0.52
RXRB-203ENST00000481441 NFE4Q86UQ8 179 aa11.81□□□□□ -0.52
RXRB-203ENST00000481441 ZNF680Q8NEM1 530 aa11.81□□□□□ -0.52
RXRB-203ENST00000481441 RPUSD4Q96CM3 377 aaKnown RBP11.81□□□□□ -0.52
RXRB-203ENST00000481441 NXPH4O95158 308 aa11.8□□□□□ -0.52
RXRB-203ENST00000481441 GCSAMLQ5JQS6 135 aa11.8□□□□□ -0.52
RXRB-203ENST00000481441 GFI1BQ5VTD9 330 aa11.8□□□□□ -0.52
RXRB-203ENST00000481441 Q6ZTI0 123 aa11.8□□□□□ -0.52
RXRB-203ENST00000481441 RAB2AP61019 212 aa11.79□□□□□ -0.52
RXRB-203ENST00000481441 DAZ2Q13117 558 aaKnown RBP11.79□□□□□ -0.52
RXRB-203ENST00000481441 AKR1C8PQ5T2L2 129 aa11.79□□□□□ -0.52
RXRB-203ENST00000481441 Q6ZRG5 221 aa11.79□□□□□ -0.52
RXRB-203ENST00000481441 IFNA7P01567 189 aa11.78□□□□□ -0.52
RXRB-203ENST00000481441 SULT1A2P50226 295 aa11.78□□□□□ -0.52
RXRB-203ENST00000481441 ACOT6Q3I5F7 207 aaPredicted RBP11.78□□□□□ -0.52
RXRB-203ENST00000481441 LRRC20Q8TCA0 184 aa11.78□□□□□ -0.52
RXRB-203ENST00000481441 HIGD1AQ9Y241 93 aa11.78□□□□□ -0.52
RXRB-203ENST00000481441 UMAD1C9J7I0 102 aa11.77□□□□□ -0.53
RXRB-203ENST00000481441 MBP02144 154 aa11.77□□□□□ -0.53
RXRB-203ENST00000481441 FHITP49789 147 aa11.77□□□□□ -0.53
RXRB-203ENST00000481441 PLP1P60201 277 aa11.77□□□□□ -0.53
RXRB-203ENST00000481441 PATE2Q6UY27 113 aa11.77□□□□□ -0.53
RXRB-203ENST00000481441 OR10G4Q8NGN3 311 aa11.77□□□□□ -0.53
RXRB-203ENST00000481441 OR10G9Q8NGN4 311 aa11.77□□□□□ -0.53
RXRB-203ENST00000481441 OR10G7Q8NGN6 311 aa11.77□□□□□ -0.53
RXRB-203ENST00000481441 TMEM37Q8WXS4 190 aa11.77□□□□□ -0.53
RXRB-203ENST00000481441 MRPS12O15235 138 aaKnown RBP11.76□□□□□ -0.53
RXRB-203ENST00000481441 COX7A2P2O60397 106 aa11.76□□□□□ -0.53
RXRB-203ENST00000481441 HYPMO75409 117 aa11.76□□□□□ -0.53
RXRB-203ENST00000481441 OR5G3P0C626 314 aa11.76□□□□□ -0.53
RXRB-203ENST00000481441 PXDC1Q5TGL8 231 aa11.76□□□□□ -0.53
RXRB-203ENST00000481441 FAM122CQ6P4D5 195 aa11.76□□□□□ -0.53
RXRB-203ENST00000481441 OR1L4Q8NGR5 311 aa11.76□□□□□ -0.53
RXRB-203ENST00000481441 TRGV2A0A075B6R0 118 aa11.75□□□□□ -0.53
RXRB-203ENST00000481441 KRTAP29-1A8MX34 341 aaPredicted RBP11.75□□□□□ -0.53
RXRB-203ENST00000481441 EIF3GO75821 320 aaKnown RBP eCLIP11.75□□□□□ -0.53
RXRB-203ENST00000481441 RAB5CP51148 216 aa11.75□□□□□ -0.53
RXRB-203ENST00000481441 C10orf113Q5VZT2 155 aa11.75□□□□□ -0.53
RXRB-203ENST00000481441 FAM213BQ8TBF2 198 aa11.75□□□□□ -0.53
RXRB-203ENST00000481441 PFDN5Q99471 154 aa11.75□□□□□ -0.53
RXRB-203ENST00000481441 TMEM70Q9BUB7 260 aa11.75□□□□□ -0.53
RXRB-203ENST00000481441 DNAJC4Q9NNZ3 241 aa11.75□□□□□ -0.53
RXRB-203ENST00000481441 ZNF331Q9NQX6 463 aaPredicted RBP11.75□□□□□ -0.53
RXRB-203ENST00000481441 PRAC2D3DTV9 90 aa11.74□□□□□ -0.53
RXRB-203ENST00000481441 ZNF726P1Q15940 193 aa11.74□□□□□ -0.53
RXRB-203ENST00000481441 PCNPQ8WW12 178 aaKnown RBP11.74□□□□□ -0.53
RXRB-203ENST00000481441 PYGO2Q9BRQ0 406 aa11.74□□□□□ -0.53
RXRB-203ENST00000481441 ICOSQ9Y6W8 199 aa11.74□□□□□ -0.53
RXRB-203ENST00000481441 RGS13O14921 159 aa11.73□□□□□ -0.53
RXRB-203ENST00000481441 ZNF324O75467 553 aaPredicted RBP11.73□□□□□ -0.53
RXRB-203ENST00000481441 MORN5Q5VZ52 161 aa11.73□□□□□ -0.53
RXRB-203ENST00000481441 LYPD5Q6UWN5 251 aa11.73□□□□□ -0.53
RXRB-203ENST00000481441 DPPA3Q6W0C5 159 aa11.73□□□□□ -0.53
RXRB-203ENST00000481441 MIR17HGQ75NE6 70 aa11.73□□□□□ -0.53
RXRB-203ENST00000481441 LINC00305Q7Z4B0 112 aa11.73□□□□□ -0.53
RXRB-203ENST00000481441 C11orf72Q8NBR9 251 aa11.73□□□□□ -0.53
RXRB-203ENST00000481441 ACTR3CQ9C0K3 210 aaPredicted RBP11.73□□□□□ -0.53
RXRB-203ENST00000481441 MSRB1Q9NZV6 116 aa11.73□□□□□ -0.53
RXRB-203ENST00000481441 HMCN2Q8NDA2 5059 aa11.73□□□□□ -0.53
RXRB-203ENST00000481441 TRAV9-2A0A087WT02 112 aa11.72□□□□□ -0.53
RXRB-203ENST00000481441 TRAV12-3A0A0B4J271 114 aa11.72□□□□□ -0.53
RXRB-203ENST00000481441 A0A1W2PPV4 95 aa11.72□□□□□ -0.53
RXRB-203ENST00000481441 HMGB3O15347 200 aaKnown RBP11.72□□□□□ -0.53
RXRB-203ENST00000481441 PAX4O43316 350 aa11.72□□□□□ -0.53
RXRB-203ENST00000481441 CDC34P49427 236 aaPredicted RBP11.72□□□□□ -0.53
RXRB-203ENST00000481441 LCN15Q6UWW0 184 aa11.72□□□□□ -0.53
RXRB-203ENST00000481441 LINC00467Q9BRT7 94 aa11.72□□□□□ -0.53
RXRB-203ENST00000481441 SLC50A1Q9BRV3 221 aa11.72□□□□□ -0.53
RXRB-203ENST00000481441 GSN-AS1Q9NRJ2 163 aa11.72□□□□□ -0.53
RXRB-203ENST00000481441 FUT9Q9Y231 359 aa11.72□□□□□ -0.53
RXRB-203ENST00000481441 TRAV5A0A0B4J249 113 aa11.71□□□□□ -0.53
RXRB-203ENST00000481441 CTXND1A0A1B0GTU2 59 aa11.71□□□□□ -0.53
RXRB-203ENST00000481441 J3KRW8 73 aa11.71□□□□□ -0.53
RXRB-203ENST00000481441 SNRPCP09234 159 aaKnown RBP11.71□□□□□ -0.53
RXRB-203ENST00000481441 RAB24Q969Q5 203 aa11.71□□□□□ -0.53
RXRB-203ENST00000481441 MRPL32Q9BYC8 188 aaKnown RBP11.71□□□□□ -0.53
RXRB-203ENST00000481441 LY96Q9Y6Y9 160 aa11.71□□□□□ -0.53
RXRB-203ENST00000481441 TRGV1A0A0A0MS02 117 aa11.7□□□□□ -0.54
RXRB-203ENST00000481441 NMBP08949 121 aa11.7□□□□□ -0.54
RXRB-203ENST00000481441 CT45A10P0DMU9 189 aa11.7□□□□□ -0.54
RXRB-203ENST00000481441 S100A7AQ86SG5 101 aa11.7□□□□□ -0.54
RXRB-203ENST00000481441 SAT2Q96F10 170 aaPredicted RBP11.7□□□□□ -0.54
RXRB-203ENST00000481441 ODF3Q96PU9 254 aa11.7□□□□□ -0.54
RXRB-203ENST00000481441 IGLV5-52A0A0A0MRZ9 124 aa11.69□□□□□ -0.54
RXRB-203ENST00000481441 MAP1LC3B2A6NCE7 125 aa11.69□□□□□ -0.54
RXRB-203ENST00000481441 K7EP13 123 aa11.69□□□□□ -0.54
RXRB-203ENST00000481441 SLC17A3O00476 420 aa11.69□□□□□ -0.54
RXRB-203ENST00000481441 H2AFB1P0C5Y9 115 aa11.69□□□□□ -0.54
RXRB-203ENST00000481441 LEPP41159 167 aa11.69□□□□□ -0.54
RXRB-203ENST00000481441 BLOC1S1P78537 153 aa11.69□□□□□ -0.54
RXRB-203ENST00000481441 SERTAD4-AS1Q5TG53 156 aa11.69□□□□□ -0.54
RXRB-203ENST00000481441 SFT2D1Q8WV19 159 aa11.69□□□□□ -0.54
RXRB-203ENST00000481441 MBD3L1Q8WWY6 194 aa11.69□□□□□ -0.54
RXRB-203ENST00000481441 FAM167A-AS1Q96KT0 104 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms