RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 F8W1H4 67 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 KRASP01116 189 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 MYOD1P15172 320 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 EMP1P54849 157 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 PHLDA2Q53GA4 152 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 OR1L8Q8NGR8 309 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 TMEM101Q96IK0 257 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 KLK11Q9UBX7 282 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 MTFP1Q9UDX5 166 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 TRBV7-1A0A0A6YYK4 115 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 TEX48A0A1B0GUV7 120 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 C7orf71A4D174 169 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 C9JAW5 83 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 TMEM250H0YL14 139 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 M0QYG6 137 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 CSN3P07498 182 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 LINC00869P0C866 280 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 LYL1P12980 280 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 SSBP1Q04837 148 aaKnown RBP8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 CT83Q5H943 113 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 BVES-AS1Q5T3Y7 98 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 LCN12Q6JVE5 192 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 TBC1D26Q86UD7 250 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 HAPLN4Q86UW8 402 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 ATP6V0E2Q8NHE4 81 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 LSM10Q969L4 123 aaKnown RBP8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 PRNDQ9UKY0 176 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 HIGD1AQ9Y241 93 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 TRAV8-6A0A0B4J262 113 aa8.74□□□□□ -1.01
HLA-DOB-208ENST00000475235 TEX50A0A1B0GTY4 177 aa8.74□□□□□ -1.01
HLA-DOB-208ENST00000475235 LGALS9O00182 355 aa8.74□□□□□ -1.01
HLA-DOB-208ENST00000475235 CD3DP04234 171 aa8.74□□□□□ -1.01
HLA-DOB-208ENST00000475235 CRYBB3P26998 211 aa8.74□□□□□ -1.01
HLA-DOB-208ENST00000475235 EWSR1Q01844 656 aaKnown RBP eCLIP8.74□□□□□ -1.01
HLA-DOB-208ENST00000475235 RNASE12Q5GAN4 147 aaKnown RBP8.74□□□□□ -1.01
HLA-DOB-208ENST00000475235 OR10J3Q5JRS4 329 aa8.74□□□□□ -1.01
HLA-DOB-208ENST00000475235 LHFPL1Q86WI0 220 aa8.74□□□□□ -1.01
HLA-DOB-208ENST00000475235 GPHB5Q86YW7 130 aa8.74□□□□□ -1.01
HLA-DOB-208ENST00000475235 STHQ8IWL8 128 aa8.74□□□□□ -1.01
HLA-DOB-208ENST00000475235 SGPP2Q8IWX5 399 aa8.74□□□□□ -1.01
HLA-DOB-208ENST00000475235 TMEM229BQ8NBD8 167 aa8.74□□□□□ -1.01
HLA-DOB-208ENST00000475235 CCDC140Q96MF4 163 aa8.74□□□□□ -1.01
HLA-DOB-208ENST00000475235 SH3BGRL3Q9H299 93 aa8.74□□□□□ -1.01
HLA-DOB-208ENST00000475235 NDUFA4L2Q9NRX3 87 aa8.74□□□□□ -1.01
HLA-DOB-208ENST00000475235 RHODO00212 210 aa8.73□□□□□ -1.01
HLA-DOB-208ENST00000475235 RPL7P18124 248 aaKnown RBP8.73□□□□□ -1.01
HLA-DOB-208ENST00000475235 XGP55808 180 aa8.73□□□□□ -1.01
HLA-DOB-208ENST00000475235 RND3P61587 244 aa8.73□□□□□ -1.01
HLA-DOB-208ENST00000475235 CLEC19AQ6UXS0 136 aa8.73□□□□□ -1.01
HLA-DOB-208ENST00000475235 WWC2-AS2Q96NR7 200 aa8.73□□□□□ -1.01
HLA-DOB-208ENST00000475235 PMCHL2Q9BQD1 86 aa8.73□□□□□ -1.01
HLA-DOB-208ENST00000475235 ZMAT4Q9H898 229 aa8.73□□□□□ -1.01
HLA-DOB-208ENST00000475235 U3KQK5 164 aa8.73□□□□□ -1.01
HLA-DOB-208ENST00000475235 C15orf61A6NNL5 157 aa8.72□□□□□ -1.01
HLA-DOB-208ENST00000475235 FNDC10F2Z333 226 aa8.72□□□□□ -1.01
HLA-DOB-208ENST00000475235 IGHV3-23P01764 117 aa8.72□□□□□ -1.01
HLA-DOB-208ENST00000475235 FRMD6-AS1P0C7T7 363 aa8.72□□□□□ -1.01
HLA-DOB-208ENST00000475235 NTF3P20783 257 aa8.72□□□□□ -1.01
HLA-DOB-208ENST00000475235 WT1-ASQ06250 92 aa8.72□□□□□ -1.01
HLA-DOB-208ENST00000475235 Q6ZVH6 145 aa8.72□□□□□ -1.01
HLA-DOB-208ENST00000475235 GTSCR1Q86UQ5 136 aa8.72□□□□□ -1.01
HLA-DOB-208ENST00000475235 OR10P1Q8NGE3 313 aa8.72□□□□□ -1.01
HLA-DOB-208ENST00000475235 OR10G7Q8NGN6 311 aa8.72□□□□□ -1.01
HLA-DOB-208ENST00000475235 CMTM2Q8TAZ6 248 aa8.72□□□□□ -1.01
HLA-DOB-208ENST00000475235 DYNLRB2Q8TF09 96 aa8.72□□□□□ -1.01
HLA-DOB-208ENST00000475235 AQP10Q96PS8 301 aa8.72□□□□□ -1.01
HLA-DOB-208ENST00000475235 EIF5A2Q9GZV4 153 aaKnown RBP8.72□□□□□ -1.01
HLA-DOB-208ENST00000475235 TMEM14BQ9NUH8 114 aa8.72□□□□□ -1.01
HLA-DOB-208ENST00000475235 TP53TG1Q9Y2A0 90 aa8.72□□□□□ -1.01
HLA-DOB-208ENST00000475235 NSG2Q9Y328 171 aa8.72□□□□□ -1.01
HLA-DOB-208ENST00000475235 YTHDF2Q9Y5A9 579 aaKnown RBP8.72□□□□□ -1.01
HLA-DOB-208ENST00000475235 TAL2Q16559 108 aa8.71□□□□□ -1.01
HLA-DOB-208ENST00000475235 DPPA3Q6W0C5 159 aa8.71□□□□□ -1.01
HLA-DOB-208ENST00000475235 Q6ZRG5 221 aa8.71□□□□□ -1.01
HLA-DOB-208ENST00000475235 Q8N1Y9 231 aa8.71□□□□□ -1.01
HLA-DOB-208ENST00000475235 ZNF502Q8TBZ5 544 aa8.71□□□□□ -1.01
HLA-DOB-208ENST00000475235 SEC22AQ96IW7 307 aa8.71□□□□□ -1.01
HLA-DOB-208ENST00000475235 TM2D2Q9BX73 214 aa8.71□□□□□ -1.01
HLA-DOB-208ENST00000475235 TECRQ9NZ01 308 aaKnown RBP8.71□□□□□ -1.01
HLA-DOB-208ENST00000475235 F11RQ9Y624 299 aaKnown RBP8.71□□□□□ -1.01
HLA-DOB-208ENST00000475235 S4R3C0 116 aa8.71□□□□□ -1.01
HLA-DOB-208ENST00000475235 C2orf70A6NJV1 201 aa8.7□□□□□ -1.02
HLA-DOB-208ENST00000475235 C17orf112F2Z3M2 114 aa8.7□□□□□ -1.02
HLA-DOB-208ENST00000475235 JTBO76095 146 aa8.7□□□□□ -1.02
HLA-DOB-208ENST00000475235 IGHV4-30-4P0DP06 118 aa8.7□□□□□ -1.02
HLA-DOB-208ENST00000475235 GPR183P32249 361 aa8.7□□□□□ -1.02
HLA-DOB-208ENST00000475235 NKX2-1P43699 371 aaPredicted RBP8.7□□□□□ -1.02
HLA-DOB-208ENST00000475235 Q0VG73 95 aa8.7□□□□□ -1.02
HLA-DOB-208ENST00000475235 Q6ZWC4 215 aa8.7□□□□□ -1.02
HLA-DOB-208ENST00000475235 PRADC1Q9BSG0 188 aa8.7□□□□□ -1.02
HLA-DOB-208ENST00000475235 MDFICQ9P1T7 246 aa8.7□□□□□ -1.02
HLA-DOB-208ENST00000475235 RABAC1Q9UI14 185 aa8.7□□□□□ -1.02
HLA-DOB-208ENST00000475235 C3orf85A0A1B0GTC6 90 aa8.7□□□□□ -1.02
HLA-DOB-208ENST00000475235 DIRC3C9JPN6 131 aa8.7□□□□□ -1.02
HLA-DOB-208ENST00000475235 TMEM262E9PQX1 116 aa8.7□□□□□ -1.02
HLA-DOB-208ENST00000475235 IGKV1-39P01597 117 aa8.7□□□□□ -1.02
HLA-DOB-208ENST00000475235 IGKV1D-39P04432 117 aa8.7□□□□□ -1.02
HLA-DOB-208ENST00000475235 GPX1P07203 203 aa8.7□□□□□ -1.02
HLA-DOB-208ENST00000475235 PI3P19957 117 aa8.7□□□□□ -1.02
HLA-DOB-208ENST00000475235 NDUFV3P56181 108 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms