RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 FOXA1P55317 472 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 FOXA3P55318 350 aaPredicted RBP0.44□□□□□ -2.34
HDAC9-222ENST00000474742 KRTAP12-3P60328 96 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 RBM3P98179 157 aaKnown RBP0.44□□□□□ -2.34
HDAC9-222ENST00000474742 ZNF345Q14585 488 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 PEA15Q15121 130 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 RHOHQ15669 191 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 ADIRFQ15847 76 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 IQCJQ1A5X6 159 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 LGALS9BQ3B8N2 356 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 S100A7L2Q5SY68 101 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 NCMAPQ5T1S8 102 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 TMEM170BQ5T4T1 132 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 LGALS9CQ6DKI2 356 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 SLC48A1Q6P1K1 146 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 TMEM14EPQ6UXP3 125 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 ATP11AUNQ6ZP68 121 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 C16orf47Q6ZP98 133 aaPredicted RBP0.44□□□□□ -2.34
HDAC9-222ENST00000474742 LINC00299Q6ZSB3 139 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 NTM-AS1Q6ZSK4 140 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 ZNF826PQ6ZT77 177 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 Q6ZTI0 123 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 SLC25A26Q70HW3 274 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 PHF5AQ7RTV0 110 aaKnown RBP0.44□□□□□ -2.34
HDAC9-222ENST00000474742 DYNAPQ8N1N2 210 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 TTC9CQ8N5M4 171 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 LINC00311Q8N616 119 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 SPANXA2-OT1Q8N9U9 137 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 SPTSSBQ8NFR3 76 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 PFN4Q8NHR9 129 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 CIRBP-AS1Q8TBR5 109 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 PPDPFLQ8WWR9 84 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 PATE1Q8WXA2 126 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 TVP23CQ96ET8 276 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 TMEM141Q96I45 108 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 PMCHL2Q9BQD1 86 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 UPK3BQ9BT76 320 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 CXCL16Q9H2A7 254 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 TMEM106BQ9NUM4 274 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 RABAC1Q9UI14 185 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 CHCHD2Q9Y6H1 151 aaPredicted RBP0.44□□□□□ -2.34
HDAC9-222ENST00000474742 MINOS1-NBL1R4GNA1 71 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 S4R3C0 116 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 TENM1Q9UKZ4 2725 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 BAZ2BQ9UIF8 2168 aaKnown RBP0.44□□□□□ -2.34
HDAC9-222ENST00000474742 WDR97A6NE52 1622 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 RIMBP3CA6NJZ7 1639 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 RIMBP3BA6NNM3 1639 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 RIMBP3Q9UFD9 1639 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 RGS12O14924 1447 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 ZNF609O15014 1411 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 MYOM3Q5VTT5 1437 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 TNS3Q68CZ2 1445 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 PPIP5K1Q6PFW1 1433 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 UACAQ9BZF9 1416 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 NCKAP5O14513 1909 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 CEP170Q5SW79 1584 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 NRKQ7Z2Y5 1582 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 PLXND1Q9Y4D7 1925 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 NINQ8N4C6 2090 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 PRDM2Q13029 1718 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 NALCNQ8IZF0 1738 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 RTTNQ86VV8 2226 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 OBSL1O75147 1896 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 CDK5RAP2Q96SN8 1893 aa0.44□□□□□ -2.34
HDAC9-222ENST00000474742 ZNF106Q9H2Y7 1883 aaKnown RBP0.44□□□□□ -2.34
HDAC9-222ENST00000474742 ARHGEF11O15085 1522 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 KDM5BQ9UGL1 1544 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 SCN8AQ9UQD0 1980 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 CFTRP13569 1480 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 IQSEC2Q5JU85 1478 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 NEO1Q92859 1461 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 UBR2Q8IWV8 1755 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 HEATR5BQ9P2D3 2071 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 IGKV1D-42A0A075B6H8 117 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 IGLV3-9A0A075B6K5 115 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 TRGV2A0A075B6R0 118 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 IGKV1OR2-108A0A075B7D4 117 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 IGHV3OR16-8A0A075B7F1 116 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 IGKV2-40A0A087WW87 121 aaPredicted RBP0.43□□□□□ -2.34
HDAC9-222ENST00000474742 A0A087WX48 190 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 TRBV6-8A0A0A6YYG3 113 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 IGKV1D-43A0A0B4J1Z2 117 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 TRAV13-2A0A0B4J235 113 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 TRAV12-1A0A0B4J245 112 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 IGKV1-9A0A0C4DH69 117 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 TEX49A0A1B0GTD5 131 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 A0A1B0GU33 70 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 FAM236AA0A1B0GUQ0 79 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 FAM236BA0A1B0GV22 79 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 A0A1B0GVG6 124 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 MDFIC2A0A1B0GVS7 189 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 C9orf170A2RU37 121 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 RBAKDNA6NC62 111 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 C19orf71A6NCJ1 209 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 ZNF815PA8K554 130 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 A8MUU9 505 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 C17orf98A8MV24 154 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 E7EUB6 86 aa0.43□□□□□ -2.34
HDAC9-222ENST00000474742 F2Z2F3 143 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms